RNA–Protein interactions for RNA: ENST00000613258.4

NUP153-203, Transcript of nucleoporin 153, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NUP153, Length 5,811 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP153-203ENST00000613258 FTSJ3Q8IY81 847 aaKnown RBP18.44■□□□□ 0.54
NUP153-203ENST00000613258 OSCARQ8IYS5 282 aa18.43■□□□□ 0.54
NUP153-203ENST00000613258 WASHC2CQ9Y4E1 1318 aa18.42■□□□□ 0.54
NUP153-203ENST00000613258 AQRO60306 1485 aaKnown RBP eCLIP18.42■□□□□ 0.544e-7■■■□□ 17.4
NUP153-203ENST00000613258 MORC1Q86VD1 984 aa18.42■□□□□ 0.54
NUP153-203ENST00000613258 SUPT16HQ9Y5B9 1047 aaKnown RBP18.4■□□□□ 0.54
NUP153-203ENST00000613258 PAK3O75914 559 aaPredicted RBP18.4■□□□□ 0.54
NUP153-203ENST00000613258 FRAT1Q92837 279 aaPredicted RBP18.39■□□□□ 0.53
NUP153-203ENST00000613258 NCAPD3P42695 1498 aa18.39■□□□□ 0.53
NUP153-203ENST00000613258 CC2D2AQ9P2K1 1620 aa18.36■□□□□ 0.53
NUP153-203ENST00000613258 HDGFL2Q7Z4V5 671 aaPredicted RBP18.35■□□□□ 0.53
NUP153-203ENST00000613258 NESP48681 1621 aa18.35■□□□□ 0.53
NUP153-203ENST00000613258 PRDM2Q13029 1718 aa18.35■□□□□ 0.53
NUP153-203ENST00000613258 IGF1RP08069 1367 aa18.35■□□□□ 0.53
NUP153-203ENST00000613258 TIMELESSQ9UNS1 1208 aa18.34■□□□□ 0.53
NUP153-203ENST00000613258 NPHP1O15259 732 aa18.33■□□□□ 0.52
NUP153-203ENST00000613258 ANP32BQ92688 251 aaKnown RBP18.32■□□□□ 0.52
NUP153-203ENST00000613258 RSPH4AQ5TD94 716 aa18.31■□□□□ 0.52
NUP153-203ENST00000613258 PNNQ9H307 717 aaKnown RBP18.31■□□□□ 0.52
NUP153-203ENST00000613258 NBR1Q14596 966 aa18.3■□□□□ 0.52
NUP153-203ENST00000613258 EID1Q9Y6B2 187 aa18.29■□□□□ 0.52
NUP153-203ENST00000613258 KTN1Q86UP2 1357 aaKnown RBP18.28■□□□□ 0.52
NUP153-203ENST00000613258 L3MBTL2Q969R5 705 aa18.28■□□□□ 0.52
NUP153-203ENST00000613258 EIF3AQ14152 1382 aaKnown RBP18.26■□□□□ 0.51
NUP153-203ENST00000613258 NUTM2FA1L443 756 aa18.26■□□□□ 0.51
NUP153-203ENST00000613258 CSB-PGBD3P0DP91 1061 aa18.24■□□□□ 0.51
NUP153-203ENST00000613258 FAM69CQ0P6D2 419 aa18.22■□□□□ 0.51
NUP153-203ENST00000613258 OS9Q13438 667 aaPredicted RBP18.22■□□□□ 0.51
NUP153-203ENST00000613258 RTF1Q92541 710 aaKnown RBP18.22■□□□□ 0.51
NUP153-203ENST00000613258 TRAK1Q9UPV9 953 aa18.21■□□□□ 0.51
NUP153-203ENST00000613258 RGS3P49796 1198 aa18.2■□□□□ 0.5
NUP153-203ENST00000613258 MRC2Q9UBG0 1479 aa18.2■□□□□ 0.5
NUP153-203ENST00000613258 CASC1Q6TDU7 716 aa18.19■□□□□ 0.5
NUP153-203ENST00000613258 EIF5BO60841 1220 aaKnown RBP18.19■□□□□ 0.5
NUP153-203ENST00000613258 CCDC144AA2RUR9 1427 aa18.19■□□□□ 0.5
NUP153-203ENST00000613258 U2AF1L5P0DN76 240 aaPredicted RBP18.19■□□□□ 0.5
NUP153-203ENST00000613258 U2AF1Q01081 240 aaKnown RBP eCLIP18.19■□□□□ 0.54e-7■□□□□ 8.9
NUP153-203ENST00000613258 GRIN2BQ13224 1484 aa18.18■□□□□ 0.5
NUP153-203ENST00000613258 SYNJ1O43426 1573 aa18.18■□□□□ 0.5
NUP153-203ENST00000613258 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.17■□□□□ 0.58e-7■□□□□ 10.3
NUP153-203ENST00000613258 CFTRP13569 1480 aa18.17■□□□□ 0.5
NUP153-203ENST00000613258 ZNF644Q9H582 1327 aaPredicted RBP18.16■□□□□ 0.5
NUP153-203ENST00000613258 NGDNQ8NEJ9 315 aaKnown RBP18.16■□□□□ 0.5
NUP153-203ENST00000613258 CCDC9Q9Y3X0 531 aaKnown RBP18.14■□□□□ 0.49
NUP153-203ENST00000613258 BECN1Q14457 450 aa18.14■□□□□ 0.49
NUP153-203ENST00000613258 TAOK2Q9UL54 1235 aa18.13■□□□□ 0.49
NUP153-203ENST00000613258 TPRNQ4KMQ1 711 aa18.13■□□□□ 0.49
NUP153-203ENST00000613258 TERF2IPQ9NYB0 399 aa18.13■□□□□ 0.49
NUP153-203ENST00000613258 CCER2I3L3R5 266 aa18.12■□□□□ 0.49
NUP153-203ENST00000613258 ZNF330Q9Y3S2 320 aaPredicted RBP18.12■□□□□ 0.49
NUP153-203ENST00000613258 KIF21BO75037 1637 aa18.11■□□□□ 0.49
NUP153-203ENST00000613258 MS4A1P11836 297 aa18.11■□□□□ 0.49
NUP153-203ENST00000613258 RALBP1Q15311 655 aa18.1■□□□□ 0.49
NUP153-203ENST00000613258 B4GALNT3Q6L9W6 998 aa18.1■□□□□ 0.49
NUP153-203ENST00000613258 DDRGK1Q96HY6 314 aa18.1■□□□□ 0.49
NUP153-203ENST00000613258 PPP4R2Q9NY27 417 aa18.1■□□□□ 0.49
NUP153-203ENST00000613258 PRG4Q92954 1404 aaPredicted RBP18.1■□□□□ 0.49
NUP153-203ENST00000613258 CCDC146Q8IYE0 955 aa18.09■□□□□ 0.49
NUP153-203ENST00000613258 LTV1Q96GA3 475 aaPredicted RBP18.09■□□□□ 0.49
NUP153-203ENST00000613258 DHX57Q6P158 1386 aaKnown RBP18.08■□□□□ 0.49
NUP153-203ENST00000613258 CHMP4BQ9H444 224 aaKnown RBP18.08■□□□□ 0.49
NUP153-203ENST00000613258 HMGXB3Q12766 1538 aa18.08■□□□□ 0.48
NUP153-203ENST00000613258 TOPBP1Q92547 1522 aa18.08■□□□□ 0.48
NUP153-203ENST00000613258 IFT140Q96RY7 1462 aa18.08■□□□□ 0.48
NUP153-203ENST00000613258 CUX1P39880 1505 aa18.07■□□□□ 0.48
NUP153-203ENST00000613258 ST20-MTHFSA0A0A6YYL1 179 aa18.06■□□□□ 0.48
NUP153-203ENST00000613258 GOLGA2Q08379 1002 aa18.06■□□□□ 0.48
NUP153-203ENST00000613258 UACAQ9BZF9 1416 aa18.06■□□□□ 0.48
NUP153-203ENST00000613258 ARHGAP5Q13017 1502 aa18.06■□□□□ 0.48
NUP153-203ENST00000613258 MYOM3Q5VTT5 1437 aa18.06■□□□□ 0.48
NUP153-203ENST00000613258 SNAPC4Q5SXM2 1469 aa18.06■□□□□ 0.48
NUP153-203ENST00000613258 FGD6Q6ZV73 1430 aa18.05■□□□□ 0.48
NUP153-203ENST00000613258 AMPHP49418 695 aa18.04■□□□□ 0.48
NUP153-203ENST00000613258 APBB1O00213 710 aa18.04■□□□□ 0.48
NUP153-203ENST00000613258 MINK1Q8N4C8 1332 aaPredicted RBP18.03■□□□□ 0.48
NUP153-203ENST00000613258 VGFO15240 615 aaPredicted RBP18.03■□□□□ 0.48
NUP153-203ENST00000613258 PHLDB1Q86UU1 1377 aa18.02■□□□□ 0.48
NUP153-203ENST00000613258 NCLP19338 710 aaKnown RBP18.02■□□□□ 0.48
NUP153-203ENST00000613258 KIF15Q9NS87 1388 aa18.02■□□□□ 0.48
NUP153-203ENST00000613258 POLA1P09884 1462 aaPredicted RBP18.02■□□□□ 0.48
NUP153-203ENST00000613258 LRRC9Q6ZRR7 1453 aa18.02■□□□□ 0.48
NUP153-203ENST00000613258 NCOA2Q15596 1464 aa18.01■□□□□ 0.47
NUP153-203ENST00000613258 CASKIN1Q8WXD9 1431 aa18.01■□□□□ 0.47
NUP153-203ENST00000613258 PANK3Q9H999 370 aa18.01■□□□□ 0.47
NUP153-203ENST00000613258 TOP2BQ02880 1626 aa18■□□□□ 0.47
NUP153-203ENST00000613258 KCNJ4P48050 445 aa18■□□□□ 0.47
NUP153-203ENST00000613258 NAP1L2Q9ULW6 460 aaPredicted RBP17.99■□□□□ 0.47
NUP153-203ENST00000613258 SYNJ2O15056 1496 aa17.98■□□□□ 0.47
NUP153-203ENST00000613258 ITPRIPQ8IWB1 547 aa17.98■□□□□ 0.47
NUP153-203ENST00000613258 CALD1Q05682 793 aaKnown RBP17.98■□□□□ 0.47
NUP153-203ENST00000613258 FYCO1Q9BQS8 1478 aa17.96■□□□□ 0.47
NUP153-203ENST00000613258 ERICH3Q5RHP9 1530 aa17.96■□□□□ 0.47
NUP153-203ENST00000613258 FGD1P98174 961 aa17.96■□□□□ 0.47
NUP153-203ENST00000613258 AFAP1Q8N556 730 aa17.96■□□□□ 0.47
NUP153-203ENST00000613258 EVC2Q86UK5 1308 aa17.96■□□□□ 0.46
NUP153-203ENST00000613258 DNMBPQ6XZF7 1577 aa17.95■□□□□ 0.46
NUP153-203ENST00000613258 BICRAQ9NZM4 1560 aa17.95■□□□□ 0.46
NUP153-203ENST00000613258 RCAN3Q9UKA8 241 aa17.95■□□□□ 0.46
NUP153-203ENST00000613258 USP47Q96K76 1375 aa17.95■□□□□ 0.46
NUP153-203ENST00000613258 TULP1O00294 542 aaPredicted RBP17.95■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms