RNA–Protein interactions for RNA: ENST00000612492.4

PMP22-209, Transcript of peripheral myelin protein 22, humanhuman

APPRIS P1 TSL 3 BASIC

Gene PMP22, Length 1,822 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMP22-209ENST00000612492 TRIM52Q96A61 297 aa21.99■■□□□ 1.11
PMP22-209ENST00000612492 ADCY10Q96PN6 1610 aa21.99■■□□□ 1.11
PMP22-209ENST00000612492 PLB1Q6P1J6 1458 aa21.96■■□□□ 1.11
PMP22-209ENST00000612492 PRG4Q92954 1404 aaPredicted RBP21.96■■□□□ 1.11
PMP22-209ENST00000612492 ITSN2Q9NZM3 1697 aa21.96■■□□□ 1.11
PMP22-209ENST00000612492 CCER2I3L3R5 266 aa21.94■■□□□ 1.1
PMP22-209ENST00000612492 GPATCH8Q9UKJ3 1502 aaKnown RBP21.93■■□□□ 1.1
PMP22-209ENST00000612492 FBLN2P98095 1184 aa21.93■■□□□ 1.1
PMP22-209ENST00000612492 ZNF644Q9H582 1327 aaPredicted RBP21.92■■□□□ 1.1
PMP22-209ENST00000612492 ABCA8O94911 1581 aa21.91■■□□□ 1.1
PMP22-209ENST00000612492 CAMSAP2Q08AD1 1489 aa21.9■■□□□ 1.1
PMP22-209ENST00000612492 CFDP1Q9UEE9 299 aaPredicted RBP21.9■■□□□ 1.1
PMP22-209ENST00000612492 ANKRD30BQ9BXX2 1392 aa21.89■■□□□ 1.09
PMP22-209ENST00000612492 ADGRL2O95490 1459 aa21.88■■□□□ 1.09
PMP22-209ENST00000612492 ANP32CO43423 234 aa21.87■■□□□ 1.09
PMP22-209ENST00000612492 HIRIP3Q9BW71 556 aaPredicted RBP21.87■■□□□ 1.09
PMP22-209ENST00000612492 NCOA1Q15788 1441 aa21.86■■□□□ 1.09
PMP22-209ENST00000612492 ADGBQ8N7X0 1667 aa21.85■■□□□ 1.09
PMP22-209ENST00000612492 KIF14Q15058 1648 aa21.85■■□□□ 1.09
PMP22-209ENST00000612492 RPRD2Q5VT52 1461 aaKnown RBP21.85■■□□□ 1.09
PMP22-209ENST00000612492 PLEKHD1A6NEE1 506 aa21.85■■□□□ 1.09
PMP22-209ENST00000612492 KCNH8Q96L42 1107 aa21.84■■□□□ 1.09
PMP22-209ENST00000612492 ATP10BO94823 1461 aa21.83■■□□□ 1.08
PMP22-209ENST00000612492 ABCC10Q5T3U5 1492 aa21.81■■□□□ 1.08
PMP22-209ENST00000612492 L3MBTL2Q969R5 705 aa21.81■■□□□ 1.08
PMP22-209ENST00000612492 CROCC2H7BZ55 1655 aa21.81■■□□□ 1.08
PMP22-209ENST00000612492 SLC4A1APQ9BWU0 796 aaKnown RBP21.79■■□□□ 1.08
PMP22-209ENST00000612492 ANKRD30AQ9BXX3 1397 aa21.79■■□□□ 1.08
PMP22-209ENST00000612492 EIF4G2P78344 907 aaKnown RBP eCLIP21.78■■□□□ 1.08
PMP22-209ENST00000612492 PZPP20742 1482 aa21.78■■□□□ 1.08
PMP22-209ENST00000612492 HSPA5P11021 654 aaKnown RBP21.78■■□□□ 1.08
PMP22-209ENST00000612492 SHANK2Q9UPX8 1470 aa21.77■■□□□ 1.08
PMP22-209ENST00000612492 TEX14Q8IWB6 1497 aa21.75■■□□□ 1.07
PMP22-209ENST00000612492 CDC42BPAQ5VT25 1732 aa21.75■■□□□ 1.07
PMP22-209ENST00000612492 FOXD1Q16676 465 aa21.75■■□□□ 1.07
PMP22-209ENST00000612492 PTPRGP23470 1445 aa21.74■■□□□ 1.07
PMP22-209ENST00000612492 ZNF777Q9ULD5 760 aaPredicted RBP21.72■■□□□ 1.07
PMP22-209ENST00000612492 SUPT16HQ9Y5B9 1047 aaKnown RBP21.72■■□□□ 1.07
PMP22-209ENST00000612492 KIAA1107Q9UPP5 1409 aa21.71■■□□□ 1.07
PMP22-209ENST00000612492 WASHC2AQ641Q2 1341 aa21.71■■□□□ 1.07
PMP22-209ENST00000612492 ANKRD50Q9ULJ7 1429 aa21.69■■□□□ 1.06
PMP22-209ENST00000612492 ARHGEF5Q12774 1597 aa21.68■■□□□ 1.06
PMP22-209ENST00000612492 C9orf84Q5VXU9 1444 aa21.67■■□□□ 1.06
PMP22-209ENST00000612492 NBPF8Q3BBV2 869 aa21.66■■□□□ 1.06
PMP22-209ENST00000612492 SHROOM2Q13796 1616 aa21.65■■□□□ 1.06
PMP22-209ENST00000612492 RSPH4AQ5TD94 716 aa21.64■■□□□ 1.06
PMP22-209ENST00000612492 TSPY4P0CV99 314 aa21.64■■□□□ 1.05
PMP22-209ENST00000612492 TSPY10P0CW01 314 aa21.64■■□□□ 1.05
PMP22-209ENST00000612492 KDM5DQ9BY66 1539 aa21.64■■□□□ 1.05
PMP22-209ENST00000612492 SPATA31E1Q6ZUB1 1445 aa21.63■■□□□ 1.05
PMP22-209ENST00000612492 CHD1O14646 1710 aa21.62■■□□□ 1.05
PMP22-209ENST00000612492 CNTLNQ9NXG0 1405 aa21.62■■□□□ 1.05
PMP22-209ENST00000612492 MBD5Q9P267 1494 aa21.61■■□□□ 1.05
PMP22-209ENST00000612492 CCDC7Q96M83 1385 aa21.61■■□□□ 1.05
PMP22-209ENST00000612492 PKD2Q13563 968 aa21.61■■□□□ 1.05
PMP22-209ENST00000612492 PREX2Q70Z35 1606 aa21.58■■□□□ 1.04
PMP22-209ENST00000612492 NUP155O75694 1391 aa21.56■■□□□ 1.04
PMP22-209ENST00000612492 CCDC141Q6ZP82 1450 aa21.55■■□□□ 1.04
PMP22-209ENST00000612492 POLR1AO95602 1720 aaPredicted RBP21.55■■□□□ 1.04
PMP22-209ENST00000612492 KIF15Q9NS87 1388 aa21.55■■□□□ 1.04
PMP22-209ENST00000612492 C11orf95C9JLR9 678 aaPredicted RBP21.55■■□□□ 1.04
PMP22-209ENST00000612492 CDC42BPBQ9Y5S2 1711 aa21.54■■□□□ 1.04
PMP22-209ENST00000612492 SAMD9LQ8IVG5 1584 aa21.54■■□□□ 1.04
PMP22-209ENST00000612492 UHRF1BP1Q6BDS2 1440 aa21.53■■□□□ 1.04
PMP22-209ENST00000612492 HNRNPMP52272 730 aaKnown RBP eCLIP21.53■■□□□ 1.04
PMP22-209ENST00000612492 ABCC2Q92887 1545 aa21.51■■□□□ 1.03
PMP22-209ENST00000612492 ARHGEF12Q9NZN5 1544 aa21.51■■□□□ 1.03
PMP22-209ENST00000612492 MAST1Q9Y2H9 1570 aa21.5■■□□□ 1.03
PMP22-209ENST00000612492 ARID4BQ4LE39 1312 aaPredicted RBP21.49■■□□□ 1.03
PMP22-209ENST00000612492 KIF7Q2M1P5 1343 aa21.49■■□□□ 1.03
PMP22-209ENST00000612492 PLEKHH2Q8IVE3 1493 aa21.48■■□□□ 1.03
PMP22-209ENST00000612492 PRKRIP1Q9H875 184 aaPredicted RBP21.46■■□□□ 1.03
PMP22-209ENST00000612492 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.46■■□□□ 1.03
PMP22-209ENST00000612492 RALGAPBQ86X10 1494 aa21.44■■□□□ 1.02
PMP22-209ENST00000612492 TTC37Q6PGP7 1564 aa21.43■■□□□ 1.02
PMP22-209ENST00000612492 UHRF1BP1LA0JNW5 1464 aa21.43■■□□□ 1.02
PMP22-209ENST00000612492 ARHGAP5Q13017 1502 aa21.42■■□□□ 1.02
PMP22-209ENST00000612492 USP47Q96K76 1375 aa21.42■■□□□ 1.02
PMP22-209ENST00000612492 NEFLP07196 543 aa21.42■■□□□ 1.02
PMP22-209ENST00000612492 FAM135AQ9P2D6 1515 aa21.41■■□□□ 1.02
PMP22-209ENST00000612492 KDM5CP41229 1560 aa21.41■■□□□ 1.02
PMP22-209ENST00000612492 FKBP8Q14318 412 aa21.41■■□□□ 1.02
PMP22-209ENST00000612492 CLASP1Q7Z460 1538 aa21.4■■□□□ 1.02
PMP22-209ENST00000612492 SYCP2Q9BX26 1530 aa21.4■■□□□ 1.02
PMP22-209ENST00000612492 ERCC6L2Q5T890 1561 aa21.4■■□□□ 1.02
PMP22-209ENST00000612492 MYO5CQ9NQX4 1742 aa21.4■■□□□ 1.02
PMP22-209ENST00000612492 PLXNC1O60486 1568 aa21.39■■□□□ 1.01
PMP22-209ENST00000612492 UNC13BO14795 1591 aa21.38■■□□□ 1.01
PMP22-209ENST00000612492 HNRNPUQ00839 825 aaKnown RBP eCLIP21.38■■□□□ 1.01
PMP22-209ENST00000612492 PLCH2O75038 1416 aa21.36■■□□□ 1.01
PMP22-209ENST00000612492 ROCK2O75116 1388 aaKnown RBP21.35■■□□□ 1.01
PMP22-209ENST00000612492 BCORL1Q5H9F3 1711 aa21.34■■□□□ 1.01
PMP22-209ENST00000612492 ZNF326Q5BKZ1 582 aaKnown RBP21.33■■□□□ 1.01
PMP22-209ENST00000612492 DHX29Q7Z478 1369 aaKnown RBP21.33■■□□□ 1
PMP22-209ENST00000612492 DUOX2Q9NRD8 1548 aa21.33■■□□□ 1
PMP22-209ENST00000612492 ZCCHC11Q5TAX3 1644 aaKnown RBP21.31■■□□□ 1
PMP22-209ENST00000612492 CCDC184Q52MB2 194 aa21.31■■□□□ 1
PMP22-209ENST00000612492 EFCAB2Q5VUJ9 269 aa21.31■■□□□ 1
PMP22-209ENST00000612492 CARD11Q9BXL7 1154 aa21.31■■□□□ 1
PMP22-209ENST00000612492 IQGAP3Q86VI3 1631 aa21.3■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms