RNA–Protein interactions for RNA: ENST00000612438.1

LINC00547-201, long intergenic non-protein coding RNA 547, humanhuman

TSL 2 BASIC

Gene LINC00547, Length 3,314 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00547-201ENST00000612438 RBM10P98175 930 aaKnown RBP11.85□□□□□ -0.51
LINC00547-201ENST00000612438 AAMPQ13685 434 aa11.85□□□□□ -0.51
LINC00547-201ENST00000612438 SUPT6HQ7KZ85 1726 aaKnown RBP11.84□□□□□ -0.51
LINC00547-201ENST00000612438 LRRIQ1Q96JM4 1722 aa11.84□□□□□ -0.51
LINC00547-201ENST00000612438 DENND4BO75064 1496 aaPredicted RBP11.84□□□□□ -0.51
LINC00547-201ENST00000612438 RRP7BPQ9NSQ0 103 aa11.84□□□□□ -0.51
LINC00547-201ENST00000612438 EHBP1L1Q8N3D4 1523 aa11.84□□□□□ -0.51
LINC00547-201ENST00000612438 THOC2Q8NI27 1593 aaKnown RBP11.84□□□□□ -0.51
LINC00547-201ENST00000612438 CNTLNQ9NXG0 1405 aa11.84□□□□□ -0.51
LINC00547-201ENST00000612438 CCDC184Q52MB2 194 aa11.83□□□□□ -0.52
LINC00547-201ENST00000612438 WASHC2CQ9Y4E1 1318 aa11.83□□□□□ -0.52
LINC00547-201ENST00000612438 ARHGEF11O15085 1522 aa11.83□□□□□ -0.52
LINC00547-201ENST00000612438 UGGT2Q9NYU1 1516 aa11.83□□□□□ -0.52
LINC00547-201ENST00000612438 TCOF1Q13428 1488 aaKnown RBP11.82□□□□□ -0.52
LINC00547-201ENST00000612438 PRKRIP1Q9H875 184 aaPredicted RBP11.81□□□□□ -0.52
LINC00547-201ENST00000612438 USP35Q9P2H5 1018 aa11.81□□□□□ -0.52
LINC00547-201ENST00000612438 CHIC2Q9UKJ5 165 aa11.81□□□□□ -0.52
LINC00547-201ENST00000612438 ZBTB47Q9UFB7 747 aaPredicted RBP11.81□□□□□ -0.52
LINC00547-201ENST00000612438 AKNAQ7Z591 1439 aa11.81□□□□□ -0.52
LINC00547-201ENST00000612438 HECW1Q76N89 1606 aa11.8□□□□□ -0.52
LINC00547-201ENST00000612438 FBLN2P98095 1184 aa11.8□□□□□ -0.52
LINC00547-201ENST00000612438 MPHOSPH9Q99550 1183 aa11.8□□□□□ -0.52
LINC00547-201ENST00000612438 NCOA1Q15788 1441 aa11.8□□□□□ -0.52
LINC00547-201ENST00000612438 L3MBTL2Q969R5 705 aa11.8□□□□□ -0.52
LINC00547-201ENST00000612438 CCDC7Q96M83 1385 aa11.8□□□□□ -0.52
LINC00547-201ENST00000612438 BRPF3Q9ULD4 1205 aa11.8□□□□□ -0.52
LINC00547-201ENST00000612438 MAGI3Q5TCQ9 1506 aa11.79□□□□□ -0.52
LINC00547-201ENST00000612438 GCC2Q8IWJ2 1684 aa11.79□□□□□ -0.52
LINC00547-201ENST00000612438 ZBED9Q6R2W3 1325 aa11.79□□□□□ -0.52
LINC00547-201ENST00000612438 IPO9Q96P70 1041 aaKnown RBP11.78□□□□□ -0.52
LINC00547-201ENST00000612438 ANP32AP39687 249 aaKnown RBP11.78□□□□□ -0.52
LINC00547-201ENST00000612438 FAM9BQ8IZU0 186 aa11.78□□□□□ -0.52
LINC00547-201ENST00000612438 URB2Q14146 1524 aaKnown RBP11.77□□□□□ -0.52
LINC00547-201ENST00000612438 MRS2Q9HD23 443 aa11.77□□□□□ -0.52
LINC00547-201ENST00000612438 KDM6BO15054 1643 aa11.77□□□□□ -0.53
LINC00547-201ENST00000612438 PDS5BQ9NTI5 1447 aa11.76□□□□□ -0.53
LINC00547-201ENST00000612438 NEFMP07197 916 aa11.76□□□□□ -0.53
LINC00547-201ENST00000612438 BCL11BQ9C0K0 894 aaPredicted RBP11.76□□□□□ -0.53
LINC00547-201ENST00000612438 GAPVD1Q14C86 1478 aa11.76□□□□□ -0.53
LINC00547-201ENST00000612438 ABCA5Q8WWZ7 1642 aa11.76□□□□□ -0.53
LINC00547-201ENST00000612438 B4GALNT3Q6L9W6 998 aa11.75□□□□□ -0.53
LINC00547-201ENST00000612438 FAM43AQ8N2R8 423 aa11.75□□□□□ -0.53
LINC00547-201ENST00000612438 MIA2Q96PC5 1412 aa11.75□□□□□ -0.53
LINC00547-201ENST00000612438 HSP90AA2PQ14568 343 aaPredicted RBP11.74□□□□□ -0.53
LINC00547-201ENST00000612438 NBPF8Q3BBV2 869 aa11.74□□□□□ -0.53
LINC00547-201ENST00000612438 FOXD1Q16676 465 aa11.74□□□□□ -0.53
LINC00547-201ENST00000612438 ANKRD30BQ9BXX2 1392 aa11.73□□□□□ -0.53
LINC00547-201ENST00000612438 KIF21AQ7Z4S6 1674 aa11.73□□□□□ -0.53
LINC00547-201ENST00000612438 SPATA31E1Q6ZUB1 1445 aa11.73□□□□□ -0.53
LINC00547-201ENST00000612438 RRP9O43818 475 aaKnown RBP11.73□□□□□ -0.53
LINC00547-201ENST00000612438 KIF7Q2M1P5 1343 aa11.72□□□□□ -0.53
LINC00547-201ENST00000612438 RPRD2Q5VT52 1461 aaKnown RBP11.72□□□□□ -0.53
LINC00547-201ENST00000612438 EPRSP07814 1512 aaKnown RBP11.71□□□□□ -0.54
LINC00547-201ENST00000612438 ERCC6Q03468 1493 aa11.71□□□□□ -0.54
LINC00547-201ENST00000612438 TEX14Q8IWB6 1497 aa11.7□□□□□ -0.54
LINC00547-201ENST00000612438 ROCK1Q13464 1354 aa11.69□□□□□ -0.54
LINC00547-201ENST00000612438 LAMC3Q9Y6N6 1575 aa11.69□□□□□ -0.54
LINC00547-201ENST00000612438 TAF7LQ5H9L4 462 aa11.69□□□□□ -0.54
LINC00547-201ENST00000612438 SMG6Q86US8 1419 aaKnown RBP11.69□□□□□ -0.54
LINC00547-201ENST00000612438 GSE1Q14687 1217 aa11.68□□□□□ -0.54
LINC00547-201ENST00000612438 DAPK1P53355 1430 aa11.67□□□□□ -0.54
LINC00547-201ENST00000612438 RNF123Q5XPI4 1314 aa11.66□□□□□ -0.54
LINC00547-201ENST00000612438 CDK13Q14004 1512 aaKnown RBP11.66□□□□□ -0.54
LINC00547-201ENST00000612438 SLC4A1APQ9BWU0 796 aaKnown RBP11.66□□□□□ -0.54
LINC00547-201ENST00000612438 POLR1AO95602 1720 aaPredicted RBP11.65□□□□□ -0.54
LINC00547-201ENST00000612438 PPM1GO15355 546 aaPredicted RBP11.65□□□□□ -0.54
LINC00547-201ENST00000612438 DHX29Q7Z478 1369 aaKnown RBP11.65□□□□□ -0.54
LINC00547-201ENST00000612438 ABCC5O15440 1437 aa11.65□□□□□ -0.54
LINC00547-201ENST00000612438 NUDCQ9Y266 331 aa11.65□□□□□ -0.54
LINC00547-201ENST00000612438 HSP90AA1P07900 732 aaKnown RBP11.64□□□□□ -0.55
LINC00547-201ENST00000612438 WDR62O43379 1518 aa11.64□□□□□ -0.55
LINC00547-201ENST00000612438 ZNF608Q9ULD9 1512 aaPredicted RBP11.63□□□□□ -0.55
LINC00547-201ENST00000612438 KLHL34Q8N239 644 aa11.63□□□□□ -0.55
LINC00547-201ENST00000612438 IQGAP2Q13576 1575 aa11.63□□□□□ -0.55
LINC00547-201ENST00000612438 DNMT1P26358 1616 aaKnown RBP11.62□□□□□ -0.55
LINC00547-201ENST00000612438 ZNF644Q9H582 1327 aaPredicted RBP11.61□□□□□ -0.55
LINC00547-201ENST00000612438 TARBP1Q13395 1621 aaKnown RBP11.61□□□□□ -0.55
LINC00547-201ENST00000612438 ARID4BQ4LE39 1312 aaPredicted RBP11.6□□□□□ -0.55
LINC00547-201ENST00000612438 PZPP20742 1482 aa11.59□□□□□ -0.55
LINC00547-201ENST00000612438 MBD5Q9P267 1494 aa11.59□□□□□ -0.55
LINC00547-201ENST00000612438 AEBP2Q6ZN18 517 aaPredicted RBP11.59□□□□□ -0.55
LINC00547-201ENST00000612438 LAS1LQ9Y4W2 734 aaKnown RBP11.59□□□□□ -0.55
LINC00547-201ENST00000612438 PNISRQ8TF01 805 aaKnown RBP11.59□□□□□ -0.55
LINC00547-201ENST00000612438 CHMP7Q8WUX9 453 aaPredicted RBP11.59□□□□□ -0.55
LINC00547-201ENST00000612438 USP47Q96K76 1375 aa11.59□□□□□ -0.55
LINC00547-201ENST00000612438 NCBP3Q53F19 620 aaKnown RBP11.57□□□□□ -0.56
LINC00547-201ENST00000612438 BCORL1Q5H9F3 1711 aa11.57□□□□□ -0.56
LINC00547-201ENST00000612438 MRC2Q9UBG0 1479 aa11.56□□□□□ -0.56
LINC00547-201ENST00000612438 CNGB1Q14028 1251 aaPredicted RBP11.56□□□□□ -0.56
LINC00547-201ENST00000612438 POLR3GLQ9BT43 218 aa11.56□□□□□ -0.56
LINC00547-201ENST00000612438 KIAA1107Q9UPP5 1409 aa11.56□□□□□ -0.56
LINC00547-201ENST00000612438 ADAMTS12P58397 1594 aa11.55□□□□□ -0.56
LINC00547-201ENST00000612438 PBRM1Q86U86 1689 aa11.55□□□□□ -0.56
LINC00547-201ENST00000612438 TMC1Q8TDI8 760 aa11.55□□□□□ -0.56
LINC00547-201ENST00000612438 NAP1L5Q96NT1 182 aaPredicted RBP11.55□□□□□ -0.56
LINC00547-201ENST00000612438 ROCK2O75116 1388 aaKnown RBP11.55□□□□□ -0.56
LINC00547-201ENST00000612438 NUP153P49790 1475 aaKnown RBP11.54□□□□□ -0.56
LINC00547-201ENST00000612438 FRAT1Q92837 279 aaPredicted RBP11.54□□□□□ -0.56
LINC00547-201ENST00000612438 ARXQ96QS3 562 aa11.54□□□□□ -0.56
LINC00547-201ENST00000612438 KDM5CP41229 1560 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms