RNA–Protein interactions for RNA: ENST00000610348.1

CDH24-206, Transcript of cadherin 24, humanhuman

TSL 1 (best) BASIC

Gene CDH24, Length 2,037 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH24-206ENST00000610348 ABCC5O15440 1437 aa36.04■■■■□ 3.36
CDH24-206ENST00000610348 SHROOM2Q13796 1616 aa36.02■■■■□ 3.36
CDH24-206ENST00000610348 PLB1Q6P1J6 1458 aa36.02■■■■□ 3.36
CDH24-206ENST00000610348 TRIM52Q96A61 297 aa36.01■■■■□ 3.36
CDH24-206ENST00000610348 DENND4BO75064 1496 aaPredicted RBP36.01■■■■□ 3.36
CDH24-206ENST00000610348 KDM5BQ9UGL1 1544 aa36.01■■■■□ 3.35
CDH24-206ENST00000610348 PRG4Q92954 1404 aaPredicted RBP35.98■■■■□ 3.35
CDH24-206ENST00000610348 DDX10Q13206 875 aaKnown RBP35.97■■■■□ 3.35
CDH24-206ENST00000610348 MPHOSPH9Q99550 1183 aa35.95■■■■□ 3.35
CDH24-206ENST00000610348 ABCA8O94911 1581 aa35.93■■■■□ 3.34
CDH24-206ENST00000610348 CAMSAP2Q08AD1 1489 aa35.92■■■■□ 3.34
CDH24-206ENST00000610348 GPATCH8Q9UKJ3 1502 aaKnown RBP35.91■■■■□ 3.34
CDH24-206ENST00000610348 ADGBQ8N7X0 1667 aa35.9■■■■□ 3.34
CDH24-206ENST00000610348 ERCC6L2Q5T890 1561 aa35.88■■■■□ 3.33
CDH24-206ENST00000610348 KIF14Q15058 1648 aa35.87■■■■□ 3.33
CDH24-206ENST00000610348 CFDP1Q9UEE9 299 aaPredicted RBP35.87■■■■□ 3.33
CDH24-206ENST00000610348 ZNF644Q9H582 1327 aaPredicted RBP35.86■■■■□ 3.33
CDH24-206ENST00000610348 CROCC2H7BZ55 1655 aa35.84■■■■□ 3.33
CDH24-206ENST00000610348 ADGRL2O95490 1459 aa35.82■■■■□ 3.33
CDH24-206ENST00000610348 OSCARQ8IYS5 282 aa35.81■■■■□ 3.32
CDH24-206ENST00000610348 CCER2I3L3R5 266 aa35.78■■■■□ 3.32
CDH24-206ENST00000610348 ANKRD30BQ9BXX2 1392 aa35.77■■■■□ 3.32
CDH24-206ENST00000610348 HIRIP3Q9BW71 556 aaPredicted RBP35.77■■■■□ 3.32
CDH24-206ENST00000610348 PLEKHD1A6NEE1 506 aa35.76■■■■□ 3.32
CDH24-206ENST00000610348 NCOA1Q15788 1441 aa35.76■■■■□ 3.31
CDH24-206ENST00000610348 RPRD2Q5VT52 1461 aaKnown RBP35.75■■■■□ 3.31
CDH24-206ENST00000610348 ANP32CO43423 234 aa35.75■■■■□ 3.31
CDH24-206ENST00000610348 ATP10BO94823 1461 aa35.75■■■■□ 3.31
CDH24-206ENST00000610348 CDC42BPAQ5VT25 1732 aa35.72■■■■□ 3.31
CDH24-206ENST00000610348 ABCC10Q5T3U5 1492 aa35.72■■■■□ 3.31
CDH24-206ENST00000610348 ANKRD30AQ9BXX3 1397 aa35.68■■■■□ 3.3
CDH24-206ENST00000610348 SHANK2Q9UPX8 1470 aa35.68■■■■□ 3.3
CDH24-206ENST00000610348 SLC4A1APQ9BWU0 796 aaKnown RBP35.66■■■■□ 3.3
CDH24-206ENST00000610348 PTPRGP23470 1445 aa35.64■■■■□ 3.3
CDH24-206ENST00000610348 KCNH8Q96L42 1107 aa35.64■■■■□ 3.3
CDH24-206ENST00000610348 PZPP20742 1482 aa35.64■■■■□ 3.3
CDH24-206ENST00000610348 L3MBTL2Q969R5 705 aa35.64■■■■□ 3.3
CDH24-206ENST00000610348 TEX14Q8IWB6 1497 aa35.62■■■■□ 3.29
CDH24-206ENST00000610348 EIF4G2P78344 907 aaKnown RBP eCLIP35.61■■■■□ 3.291e-6■■■■■ 49.1
CDH24-206ENST00000610348 ZNF777Q9ULD5 760 aaPredicted RBP35.61■■■■□ 3.29
CDH24-206ENST00000610348 FOXD1Q16676 465 aa35.59■■■■□ 3.29
CDH24-206ENST00000610348 HSPA5P11021 654 aaKnown RBP35.58■■■■□ 3.29
CDH24-206ENST00000610348 ARHGEF5Q12774 1597 aa35.54■■■■□ 3.28
CDH24-206ENST00000610348 KIAA1107Q9UPP5 1409 aa35.53■■■■□ 3.28
CDH24-206ENST00000610348 ANKRD50Q9ULJ7 1429 aa35.53■■■■□ 3.28
CDH24-206ENST00000610348 C9orf84Q5VXU9 1444 aa35.51■■■■□ 3.28
CDH24-206ENST00000610348 WASHC2AQ641Q2 1341 aa35.46■■■■□ 3.27
CDH24-206ENST00000610348 PREX2Q70Z35 1606 aa35.44■■■■□ 3.26
CDH24-206ENST00000610348 KDM5DQ9BY66 1539 aa35.44■■■■□ 3.26
CDH24-206ENST00000610348 TSPY4P0CV99 314 aa35.44■■■■□ 3.26
CDH24-206ENST00000610348 TSPY10P0CW01 314 aa35.44■■■■□ 3.26
CDH24-206ENST00000610348 SUPT16HQ9Y5B9 1047 aaKnown RBP35.42■■■■□ 3.26
CDH24-206ENST00000610348 RSPH4AQ5TD94 716 aa35.39■■■■□ 3.26
CDH24-206ENST00000610348 NBPF8Q3BBV2 869 aa35.38■■■■□ 3.25
CDH24-206ENST00000610348 MBD5Q9P267 1494 aa35.38■■■■□ 3.25
CDH24-206ENST00000610348 POLR1AO95602 1720 aaPredicted RBP35.37■■■■□ 3.25
CDH24-206ENST00000610348 CDC42BPBQ9Y5S2 1711 aa35.37■■■■□ 3.25
CDH24-206ENST00000610348 CNTLNQ9NXG0 1405 aa35.37■■■■□ 3.25
CDH24-206ENST00000610348 ABCC2Q92887 1545 aa35.36■■■■□ 3.25
CDH24-206ENST00000610348 CCDC141Q6ZP82 1450 aa35.35■■■■□ 3.25
CDH24-206ENST00000610348 PKD2Q13563 968 aa35.35■■■■□ 3.25
CDH24-206ENST00000610348 SPATA31E1Q6ZUB1 1445 aa35.34■■■■□ 3.25
CDH24-206ENST00000610348 SAMD9LQ8IVG5 1584 aa35.34■■■■□ 3.25
CDH24-206ENST00000610348 CCDC7Q96M83 1385 aa35.33■■■■□ 3.25
CDH24-206ENST00000610348 KIF15Q9NS87 1388 aa35.3■■■■□ 3.24
CDH24-206ENST00000610348 NUP155O75694 1391 aa35.3■■■■□ 3.24
CDH24-206ENST00000610348 UHRF1BP1LA0JNW5 1464 aa35.27■■■■□ 3.24
CDH24-206ENST00000610348 MAST1Q9Y2H9 1570 aa35.25■■■■□ 3.23
CDH24-206ENST00000610348 HNRNPMP52272 730 aaKnown RBP eCLIP35.25■■■■□ 3.23
CDH24-206ENST00000610348 ARHGEF12Q9NZN5 1544 aa35.23■■■■□ 3.23
CDH24-206ENST00000610348 PLEKHH2Q8IVE3 1493 aa35.21■■■■□ 3.23
CDH24-206ENST00000610348 UHRF1BP1Q6BDS2 1440 aa35.2■■■■□ 3.23
CDH24-206ENST00000610348 ZCCHC11Q5TAX3 1644 aaKnown RBP35.2■■■■□ 3.23
CDH24-206ENST00000610348 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP35.2■■■■□ 3.23
CDH24-206ENST00000610348 TTC37Q6PGP7 1564 aa35.2■■■■□ 3.23
CDH24-206ENST00000610348 RIMBP3CA6NJZ7 1639 aa35.2■■■■□ 3.23
CDH24-206ENST00000610348 RIMBP3BA6NNM3 1639 aa35.2■■■■□ 3.23
CDH24-206ENST00000610348 RIMBP3Q9UFD9 1639 aa35.2■■■■□ 3.23
CDH24-206ENST00000610348 MYO5CQ9NQX4 1742 aa35.19■■■■□ 3.22
CDH24-206ENST00000610348 ARHGAP5Q13017 1502 aa35.18■■■■□ 3.22
CDH24-206ENST00000610348 C11orf95C9JLR9 678 aaPredicted RBP35.16■■■■□ 3.22
CDH24-206ENST00000610348 SYCP2Q9BX26 1530 aa35.14■■■■□ 3.22
CDH24-206ENST00000610348 KIF7Q2M1P5 1343 aa35.12■■■■□ 3.21
CDH24-206ENST00000610348 PLXNC1O60486 1568 aa35.11■■■■□ 3.21
CDH24-206ENST00000610348 RALGAPBQ86X10 1494 aa35.1■■■■□ 3.21
CDH24-206ENST00000610348 FAM135AQ9P2D6 1515 aa35.1■■■■□ 3.21
CDH24-206ENST00000610348 ARID4BQ4LE39 1312 aaPredicted RBP35.09■■■■□ 3.21
CDH24-206ENST00000610348 UNC13BO14795 1591 aa35.08■■■■□ 3.21
CDH24-206ENST00000610348 KDM5CP41229 1560 aa35.08■■■■□ 3.21
CDH24-206ENST00000610348 USP47Q96K76 1375 aa35.08■■■■□ 3.21
CDH24-206ENST00000610348 PRKRIP1Q9H875 184 aaPredicted RBP35.05■■■■□ 3.2
CDH24-206ENST00000610348 NEFLP07196 543 aa35.03■■■■□ 3.2
CDH24-206ENST00000610348 PLCH2O75038 1416 aa34.98■■■■□ 3.19
CDH24-206ENST00000610348 DUOX2Q9NRD8 1548 aa34.96■■■■□ 3.19
CDH24-206ENST00000610348 ZNF326Q5BKZ1 582 aaKnown RBP34.96■■■■□ 3.19
CDH24-206ENST00000610348 HNRNPUQ00839 825 aaKnown RBP eCLIP34.96■■■■□ 3.19
CDH24-206ENST00000610348 CYB5RLQ6IPT4 315 aa34.96■■■■□ 3.19
CDH24-206ENST00000610348 BCORL1Q5H9F3 1711 aa34.95■■■■□ 3.19
CDH24-206ENST00000610348 FKBP8Q14318 412 aa34.95■■■■□ 3.19
CDH24-206ENST00000610348 IQGAP3Q86VI3 1631 aa34.94■■■■□ 3.18
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms