RNA–Protein interactions for RNA: ENST00000610234.5

LINC01278-207, Transcript of long intergenic non-protein coding RNA 1278, humanhuman

TSL 4 BASIC

Gene LINC01278, Length 555 nt, Biotype sense overlapping, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01278-207ENST00000610234 CDK13Q14004 1512 aaKnown RBP24.05■■□□□ 1.44
LINC01278-207ENST00000610234 EEA1Q15075 1411 aa24.04■■□□□ 1.44
LINC01278-207ENST00000610234 ATP10AO60312 1499 aa24.03■■□□□ 1.44
LINC01278-207ENST00000610234 RANGAP1P46060 587 aaPredicted RBP24.03■■□□□ 1.44
LINC01278-207ENST00000610234 MLECQ14165 292 aa24.02■■□□□ 1.44
LINC01278-207ENST00000610234 PREX1Q8TCU6 1659 aa24.02■■□□□ 1.44
LINC01278-207ENST00000610234 C9orf84Q5VXU9 1444 aa24.01■■□□□ 1.43
LINC01278-207ENST00000610234 STRCQ7RTU9 1775 aa23.97■■□□□ 1.43
LINC01278-207ENST00000610234 CEBPAP49715 358 aaPredicted RBP23.93■■□□□ 1.42
LINC01278-207ENST00000610234 KDM5CP41229 1560 aa23.92■■□□□ 1.42
LINC01278-207ENST00000610234 MYO5CQ9NQX4 1742 aa23.92■■□□□ 1.42
LINC01278-207ENST00000610234 EFCAB2Q5VUJ9 269 aa23.91■■□□□ 1.42
LINC01278-207ENST00000610234 ZNF518AQ6AHZ1 1483 aa23.9■■□□□ 1.42
LINC01278-207ENST00000610234 ILDR2Q71H61 639 aa23.9■■□□□ 1.42
LINC01278-207ENST00000610234 SETD1BQ9UPS6 1966 aaKnown RBP23.88■■□□□ 1.41
LINC01278-207ENST00000610234 KIF14Q15058 1648 aa23.88■■□□□ 1.41
LINC01278-207ENST00000610234 REREQ9P2R6 1566 aa23.87■■□□□ 1.41
LINC01278-207ENST00000610234 DMRT2Q9Y5R5 561 aa23.87■■□□□ 1.41
LINC01278-207ENST00000610234 UHRF1BP1Q6BDS2 1440 aa23.86■■□□□ 1.41
LINC01278-207ENST00000610234 DIP2CQ9Y2E4 1556 aa23.85■■□□□ 1.41
LINC01278-207ENST00000610234 DISP3Q9P2K9 1392 aa23.84■■□□□ 1.41
LINC01278-207ENST00000610234 AFAP1Q8N556 730 aa23.83■■□□□ 1.41
LINC01278-207ENST00000610234 PTPRTO14522 1441 aa23.83■■□□□ 1.4
LINC01278-207ENST00000610234 FMN1Q68DA7 1419 aa23.83■■□□□ 1.4
LINC01278-207ENST00000610234 SOCS7O14512 581 aa23.82■■□□□ 1.4
LINC01278-207ENST00000610234 TROQ12816 1431 aaPredicted RBP23.81■■□□□ 1.4
LINC01278-207ENST00000610234 ARHGAP35Q9NRY4 1499 aa23.8■■□□□ 1.4
LINC01278-207ENST00000610234 MLH3Q9UHC1 1453 aa23.8■■□□□ 1.4
LINC01278-207ENST00000610234 C3P01024 1663 aa23.79■■□□□ 1.4
LINC01278-207ENST00000610234 ARHGAP5Q13017 1502 aa23.79■■□□□ 1.4
LINC01278-207ENST00000610234 ABCA6Q8N139 1617 aa23.79■■□□□ 1.4
LINC01278-207ENST00000610234 AGLP35573 1532 aa23.79■■□□□ 1.4
LINC01278-207ENST00000610234 LTBP4Q8N2S1 1624 aa23.78■■□□□ 1.4
LINC01278-207ENST00000610234 CDK11AQ9UQ88 783 aaPredicted RBP23.77■■□□□ 1.4
LINC01278-207ENST00000610234 LRRIQ1Q96JM4 1722 aa23.74■■□□□ 1.39
LINC01278-207ENST00000610234 CDC42BPBQ9Y5S2 1711 aa23.74■■□□□ 1.39
LINC01278-207ENST00000610234 SPATA31D1Q6ZQQ2 1576 aa23.73■■□□□ 1.39
LINC01278-207ENST00000610234 TRAPPC8Q9Y2L5 1435 aa23.72■■□□□ 1.39
LINC01278-207ENST00000610234 IQSEC2Q5JU85 1478 aa23.72■■□□□ 1.39
LINC01278-207ENST00000610234 ABCC1P33527 1531 aa23.71■■□□□ 1.39
LINC01278-207ENST00000610234 CLIP1P30622 1438 aa23.71■■□□□ 1.39
LINC01278-207ENST00000610234 NCOA1Q15788 1441 aa23.71■■□□□ 1.39
LINC01278-207ENST00000610234 ATP1B4Q9UN42 357 aaPredicted RBP23.71■■□□□ 1.39
LINC01278-207ENST00000610234 PREX2Q70Z35 1606 aa23.69■■□□□ 1.38
LINC01278-207ENST00000610234 KIDINS220Q9ULH0 1771 aa23.67■■□□□ 1.38
LINC01278-207ENST00000610234 ITSN2Q9NZM3 1697 aa23.66■■□□□ 1.38
LINC01278-207ENST00000610234 CNTLNQ9NXG0 1405 aa23.66■■□□□ 1.38
LINC01278-207ENST00000610234 MYT1LQ9UL68 1186 aa23.63■■□□□ 1.37
LINC01278-207ENST00000610234 NPATQ14207 1427 aa23.62■■□□□ 1.37
LINC01278-207ENST00000610234 UBTFP17480 764 aaKnown RBP23.62■■□□□ 1.37
LINC01278-207ENST00000610234 MROH2AA6NES4 1674 aa23.6■■□□□ 1.37
LINC01278-207ENST00000610234 CAMSAP1Q5T5Y3 1602 aa23.59■■□□□ 1.37
LINC01278-207ENST00000610234 ESF1Q9H501 851 aaKnown RBP23.58■■□□□ 1.37
LINC01278-207ENST00000610234 CDC42BPAQ5VT25 1732 aa23.57■■□□□ 1.36
LINC01278-207ENST00000610234 SAMD9LQ8IVG5 1584 aa23.57■■□□□ 1.36
LINC01278-207ENST00000610234 CCDC18Q5T9S5 1454 aa23.56■■□□□ 1.36
LINC01278-207ENST00000610234 EHMT2Q96KQ7 1210 aa23.55■■□□□ 1.36
LINC01278-207ENST00000610234 CASKIN1Q8WXD9 1431 aa23.55■■□□□ 1.36
LINC01278-207ENST00000610234 ZMYM3Q14202 1370 aa23.53■■□□□ 1.36
LINC01278-207ENST00000610234 ZNF142P52746 1687 aaPredicted RBP23.51■■□□□ 1.35
LINC01278-207ENST00000610234 PLA2R1Q13018 1463 aa23.5■■□□□ 1.35
LINC01278-207ENST00000610234 PLXNC1O60486 1568 aa23.5■■□□□ 1.35
LINC01278-207ENST00000610234 ZNF335Q9H4Z2 1342 aaPredicted RBP23.5■■□□□ 1.35
LINC01278-207ENST00000610234 NCKAP5LQ9HCH0 1330 aa23.49■■□□□ 1.35
LINC01278-207ENST00000610234 TCOF1Q13428 1488 aaKnown RBP23.49■■□□□ 1.35
LINC01278-207ENST00000610234 SYCP2Q9BX26 1530 aa23.48■■□□□ 1.35
LINC01278-207ENST00000610234 MYO3AQ8NEV4 1616 aa23.48■■□□□ 1.35
LINC01278-207ENST00000610234 PTPRKQ15262 1439 aa23.46■■□□□ 1.35
LINC01278-207ENST00000610234 GPATCH8Q9UKJ3 1502 aaKnown RBP23.46■■□□□ 1.35
LINC01278-207ENST00000610234 SUPT6HQ7KZ85 1726 aaKnown RBP23.45■■□□□ 1.34
LINC01278-207ENST00000610234 CLTCQ00610 1675 aaKnown RBP23.44■■□□□ 1.34
LINC01278-207ENST00000610234 INO80Q9ULG1 1556 aaPredicted RBP23.44■■□□□ 1.34
LINC01278-207ENST00000610234 CEP170BQ9Y4F5 1589 aaPredicted RBP23.44■■□□□ 1.34
LINC01278-207ENST00000610234 ATP7AQ04656 1500 aa23.44■■□□□ 1.34
LINC01278-207ENST00000610234 SPAG9O60271 1321 aaKnown RBP23.44■■□□□ 1.34
LINC01278-207ENST00000610234 KIAA1107Q9UPP5 1409 aa23.43■■□□□ 1.34
LINC01278-207ENST00000610234 PKD2Q13563 968 aa23.43■■□□□ 1.34
LINC01278-207ENST00000610234 FYCO1Q9BQS8 1478 aa23.43■■□□□ 1.34
LINC01278-207ENST00000610234 UBAP1LF5GYI3 381 aa23.41■■□□□ 1.34
LINC01278-207ENST00000610234 A2MP01023 1474 aa23.41■■□□□ 1.34
LINC01278-207ENST00000610234 HNRNPMP52272 730 aaKnown RBP eCLIP23.4■■□□□ 1.34
LINC01278-207ENST00000610234 ZNF777Q9ULD5 760 aaPredicted RBP23.38■■□□□ 1.33
LINC01278-207ENST00000610234 PLEKHH2Q8IVE3 1493 aa23.36■■□□□ 1.33
LINC01278-207ENST00000610234 PPP6R1Q9UPN7 881 aa23.34■■□□□ 1.33
LINC01278-207ENST00000610234 A2ML1A8K2U0 1454 aa23.32■■□□□ 1.32
LINC01278-207ENST00000610234 DNMT1P26358 1616 aaKnown RBP23.32■■□□□ 1.32
LINC01278-207ENST00000610234 ADGBQ8N7X0 1667 aa23.3■■□□□ 1.32
LINC01278-207ENST00000610234 CHIC1Q5VXU3 224 aa23.3■■□□□ 1.32
LINC01278-207ENST00000610234 GGT6Q6P531 493 aa23.3■■□□□ 1.32
LINC01278-207ENST00000610234 CFDP1Q9UEE9 299 aaPredicted RBP23.3■■□□□ 1.32
LINC01278-207ENST00000610234 NEURL4Q96JN8 1562 aa23.28■■□□□ 1.32
LINC01278-207ENST00000610234 MBD5Q9P267 1494 aa23.27■■□□□ 1.32
LINC01278-207ENST00000610234 MED1Q15648 1581 aaPredicted RBP23.27■■□□□ 1.32
LINC01278-207ENST00000610234 CCNB3Q8WWL7 1395 aa23.26■■□□□ 1.31
LINC01278-207ENST00000610234 CPS1P31327 1500 aa23.25■■□□□ 1.31
LINC01278-207ENST00000610234 HSPA1LP34931 641 aa23.24■■□□□ 1.31
LINC01278-207ENST00000610234 POLR1AO95602 1720 aaPredicted RBP23.24■■□□□ 1.31
LINC01278-207ENST00000610234 RTEL1-TNFRSF6BF6WH68 1400 aa23.23■■□□□ 1.31
LINC01278-207ENST00000610234 SHANK2Q9UPX8 1470 aa23.22■■□□□ 1.31
LINC01278-207ENST00000610234 ZNF644Q9H582 1327 aaPredicted RBP23.21■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms