RNA–Protein interactions for RNA: ENST00000608623.1

LINC01278-202, Transcript of long intergenic non-protein coding RNA 1278, humanhuman

Gene LINC01278, Length 5,053 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01278-202ENST00000608623 STRN4Q9NRL3 753 aa5.03□□□□□ -1.6
LINC01278-202ENST00000608623 EIF4G2P78344 907 aaKnown RBP eCLIP5.03□□□□□ -1.6
LINC01278-202ENST00000608623 LAMC3Q9Y6N6 1575 aa5.03□□□□□ -1.6
LINC01278-202ENST00000608623 ESCO1Q5FWF5 840 aa5.02□□□□□ -1.61
LINC01278-202ENST00000608623 PAXIP1Q6ZW49 1069 aaPredicted RBP5.02□□□□□ -1.61
LINC01278-202ENST00000608623 C8orf37Q96NL8 207 aa5.02□□□□□ -1.61
LINC01278-202ENST00000608623 SYNJ1O43426 1573 aa5.02□□□□□ -1.61
LINC01278-202ENST00000608623 LTV1Q96GA3 475 aaPredicted RBP5.01□□□□□ -1.61
LINC01278-202ENST00000608623 SLC26A8Q96RN1 970 aa5.01□□□□□ -1.61
LINC01278-202ENST00000608623 NBPF8Q3BBV2 869 aa5.01□□□□□ -1.61
LINC01278-202ENST00000608623 NBPF14Q5TI25 921 aa5.01□□□□□ -1.61
LINC01278-202ENST00000608623 C16orf71Q8IYS4 520 aaPredicted RBP5.01□□□□□ -1.61
LINC01278-202ENST00000608623 TEX14Q8IWB6 1497 aa5.01□□□□□ -1.61
LINC01278-202ENST00000608623 ZRANB1Q9UGI0 708 aa5□□□□□ -1.61
LINC01278-202ENST00000608623 BCL11BQ9C0K0 894 aaPredicted RBP5□□□□□ -1.61
LINC01278-202ENST00000608623 AKNAQ7Z591 1439 aa4.99□□□□□ -1.61
LINC01278-202ENST00000608623 CANXP27824 592 aaKnown RBP4.99□□□□□ -1.61
LINC01278-202ENST00000608623 TOP2AP11388 1531 aaKnown RBP4.99□□□□□ -1.61
LINC01278-202ENST00000608623 SYNJ2O15056 1496 aa4.99□□□□□ -1.61
LINC01278-202ENST00000608623 HDGFL2Q7Z4V5 671 aaPredicted RBP4.98□□□□□ -1.61
LINC01278-202ENST00000608623 RAPGEF2Q9Y4G8 1499 aa4.98□□□□□ -1.61
LINC01278-202ENST00000608623 TOPBP1Q92547 1522 aa4.98□□□□□ -1.61
LINC01278-202ENST00000608623 GOLGA2Q08379 1002 aa4.98□□□□□ -1.61
LINC01278-202ENST00000608623 VGFO15240 615 aaPredicted RBP4.98□□□□□ -1.61
LINC01278-202ENST00000608623 AMPHP49418 695 aa4.98□□□□□ -1.61
LINC01278-202ENST00000608623 CERKQ8TCT0 537 aa4.98□□□□□ -1.61
LINC01278-202ENST00000608623 FMN1Q68DA7 1419 aa4.98□□□□□ -1.61
LINC01278-202ENST00000608623 RBM33Q96EV2 1170 aaKnown RBP4.98□□□□□ -1.61
LINC01278-202ENST00000608623 PRDM11Q9NQV5 511 aa4.98□□□□□ -1.61
LINC01278-202ENST00000608623 HMGXB3Q12766 1538 aa4.98□□□□□ -1.61
LINC01278-202ENST00000608623 EEA1Q15075 1411 aa4.97□□□□□ -1.61
LINC01278-202ENST00000608623 ILDR1Q86SU0 546 aaPredicted RBP4.97□□□□□ -1.61
LINC01278-202ENST00000608623 WIZO95785 1651 aa4.97□□□□□ -1.61
LINC01278-202ENST00000608623 CFTRP13569 1480 aa4.97□□□□□ -1.61
LINC01278-202ENST00000608623 NCKAP5LQ9HCH0 1330 aa4.97□□□□□ -1.61
LINC01278-202ENST00000608623 SCAPERQ9BY12 1400 aa4.97□□□□□ -1.61
LINC01278-202ENST00000608623 FBXO41Q8TF61 875 aa4.97□□□□□ -1.61
LINC01278-202ENST00000608623 TONSLQ96HA7 1378 aa4.97□□□□□ -1.61
LINC01278-202ENST00000608623 PLB1Q6P1J6 1458 aa4.97□□□□□ -1.61
LINC01278-202ENST00000608623 BICRAQ9NZM4 1560 aa4.97□□□□□ -1.61
LINC01278-202ENST00000608623 FHOD3Q2V2M9 1422 aa4.97□□□□□ -1.61
LINC01278-202ENST00000608623 UACAQ9BZF9 1416 aa4.97□□□□□ -1.61
LINC01278-202ENST00000608623 TNNT2P45379 298 aaPredicted RBP4.96□□□□□ -1.61
LINC01278-202ENST00000608623 ZNF608Q9ULD9 1512 aaPredicted RBP4.96□□□□□ -1.61
LINC01278-202ENST00000608623 MSH6P52701 1360 aa4.96□□□□□ -1.62
LINC01278-202ENST00000608623 GPRASP1Q5JY77 1395 aa4.96□□□□□ -1.62
LINC01278-202ENST00000608623 ANKRD30AQ9BXX3 1397 aa4.96□□□□□ -1.62
LINC01278-202ENST00000608623 CDCA8Q53HL2 280 aa4.96□□□□□ -1.62
LINC01278-202ENST00000608623 NLRP2Q9NX02 1062 aa4.96□□□□□ -1.62
LINC01278-202ENST00000608623 BAG6P46379 1132 aa4.95□□□□□ -1.62
LINC01278-202ENST00000608623 XPCQ01831 940 aaPredicted RBP4.95□□□□□ -1.62
LINC01278-202ENST00000608623 CADPS2Q86UW7 1296 aa4.95□□□□□ -1.62
LINC01278-202ENST00000608623 HMGB2P26583 209 aaKnown RBP4.95□□□□□ -1.62
LINC01278-202ENST00000608623 CCDC18Q5T9S5 1454 aa4.95□□□□□ -1.62
LINC01278-202ENST00000608623 NUTM2GQ5VZR2 741 aa4.95□□□□□ -1.62
LINC01278-202ENST00000608623 DCAF11Q8TEB1 546 aa4.95□□□□□ -1.62
LINC01278-202ENST00000608623 NUP155O75694 1391 aa4.95□□□□□ -1.62
LINC01278-202ENST00000608623 UHRF1BP1Q6BDS2 1440 aa4.95□□□□□ -1.62
LINC01278-202ENST00000608623 MAGI1Q96QZ7 1491 aaPredicted RBP4.95□□□□□ -1.62
LINC01278-202ENST00000608623 WASHC2AQ641Q2 1341 aa4.95□□□□□ -1.62
LINC01278-202ENST00000608623 POLD1P28340 1107 aa4.94□□□□□ -1.62
LINC01278-202ENST00000608623 RXRBP28702 533 aa4.94□□□□□ -1.62
LINC01278-202ENST00000608623 TOM1L2Q6ZVM7 507 aa4.94□□□□□ -1.62
LINC01278-202ENST00000608623 CFAP53Q96M91 514 aa4.94□□□□□ -1.62
LINC01278-202ENST00000608623 POLA1P09884 1462 aaPredicted RBP4.94□□□□□ -1.62
LINC01278-202ENST00000608623 PKD2Q13563 968 aa4.94□□□□□ -1.62
LINC01278-202ENST00000608623 GPR162Q16538 588 aa4.94□□□□□ -1.62
LINC01278-202ENST00000608623 CLSPNQ9HAW4 1339 aa4.94□□□□□ -1.62
LINC01278-202ENST00000608623 GRM1Q13255 1194 aa4.94□□□□□ -1.62
LINC01278-202ENST00000608623 ZNF772Q68DY9 489 aaPredicted RBP4.94□□□□□ -1.62
LINC01278-202ENST00000608623 ACIN1Q9UKV3 1341 aaKnown RBP4.94□□□□□ -1.62
LINC01278-202ENST00000608623 ARHGAP5Q13017 1502 aa4.93□□□□□ -1.62
LINC01278-202ENST00000608623 TRIM26Q12899 539 aaPredicted RBP4.93□□□□□ -1.62
LINC01278-202ENST00000608623 TRAK1Q9UPV9 953 aa4.93□□□□□ -1.62
LINC01278-202ENST00000608623 HIRIP3Q9BW71 556 aaPredicted RBP4.93□□□□□ -1.62
LINC01278-202ENST00000608623 ISY1Q9ULR0 285 aaKnown RBP4.93□□□□□ -1.62
LINC01278-202ENST00000608623 DENND4BO75064 1496 aaPredicted RBP4.93□□□□□ -1.62
LINC01278-202ENST00000608623 NPM3O75607 178 aaKnown RBP4.93□□□□□ -1.62
LINC01278-202ENST00000608623 MINK1Q8N4C8 1332 aaPredicted RBP4.92□□□□□ -1.62
LINC01278-202ENST00000608623 SUGP2Q8IX01 1082 aaKnown RBP eCLIP4.92□□□□□ -1.62
LINC01278-202ENST00000608623 RTF1Q92541 710 aaKnown RBP4.92□□□□□ -1.62
LINC01278-202ENST00000608623 CWC22Q9HCG8 908 aaKnown RBP4.92□□□□□ -1.62
LINC01278-202ENST00000608623 U2SURPO15042 1029 aaKnown RBP4.92□□□□□ -1.62
LINC01278-202ENST00000608623 BEGAINQ9BUH8 593 aa4.92□□□□□ -1.62
LINC01278-202ENST00000608623 CARD11Q9BXL7 1154 aa4.92□□□□□ -1.62
LINC01278-202ENST00000608623 PRDM2Q13029 1718 aa4.92□□□□□ -1.62
LINC01278-202ENST00000608623 RAPGEF4Q8WZA2 1011 aa4.92□□□□□ -1.62
LINC01278-202ENST00000608623 NUDCQ9Y266 331 aa4.92□□□□□ -1.62
LINC01278-202ENST00000608623 ZEB1P37275 1124 aaPredicted RBP4.91□□□□□ -1.62
LINC01278-202ENST00000608623 LAS1LQ9Y4W2 734 aaKnown RBP4.91□□□□□ -1.62
LINC01278-202ENST00000608623 ASXL2Q76L83 1435 aa4.91□□□□□ -1.62
LINC01278-202ENST00000608623 PMFBP1Q8TBY8 1022 aa4.91□□□□□ -1.62
LINC01278-202ENST00000608623 WDR43Q15061 677 aaKnown RBP eCLIP4.91□□□□□ -1.62
LINC01278-202ENST00000608623 LRRC59Q96AG4 307 aaKnown RBP4.91□□□□□ -1.62
LINC01278-202ENST00000608623 IGF1RP08069 1367 aa4.91□□□□□ -1.62
LINC01278-202ENST00000608623 ABTB2Q8N961 1025 aa4.9□□□□□ -1.62
LINC01278-202ENST00000608623 KNSTRNQ9Y448 316 aa4.9□□□□□ -1.62
LINC01278-202ENST00000608623 DDX54Q8TDD1 881 aaKnown RBP4.9□□□□□ -1.62
LINC01278-202ENST00000608623 FBXW7Q969H0 707 aa4.9□□□□□ -1.62
LINC01278-202ENST00000608623 NLRP6P59044 892 aa4.9□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms