RNA–Protein interactions for RNA: ENST00000608431.1

LINC00649-213, long intergenic non-protein coding RNA 649, humanhuman

TSL 5

Gene LINC00649, Length 260 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-213ENST00000608431 ABCA9Q8IUA7 1624 aa10.18□□□□□ -0.78
LINC00649-213ENST00000608431 IGF1RP08069 1367 aa10.17□□□□□ -0.78
LINC00649-213ENST00000608431 RICTORQ6R327 1708 aa10.16□□□□□ -0.78
LINC00649-213ENST00000608431 RAPGEF3O95398 923 aa10.16□□□□□ -0.78
LINC00649-213ENST00000608431 UGGT2Q9NYU1 1516 aa10.16□□□□□ -0.78
LINC00649-213ENST00000608431 KIF27Q86VH2 1401 aa10.15□□□□□ -0.79
LINC00649-213ENST00000608431 U3KPZ7 1027 aaPredicted RBP10.14□□□□□ -0.79
LINC00649-213ENST00000608431 ATXN8OSP0DMR3 200 aa10.13□□□□□ -0.79
LINC00649-213ENST00000608431 UHRF1BP1Q6BDS2 1440 aa10.13□□□□□ -0.79
LINC00649-213ENST00000608431 UBAP1LF5GYI3 381 aa10.12□□□□□ -0.79
LINC00649-213ENST00000608431 AKNAQ7Z591 1439 aa10.12□□□□□ -0.79
LINC00649-213ENST00000608431 ABCA8O94911 1581 aa10.12□□□□□ -0.79
LINC00649-213ENST00000608431 SIGLEC1Q9BZZ2 1709 aa10.11□□□□□ -0.79
LINC00649-213ENST00000608431 EFCAB5A4FU69 1503 aa10.11□□□□□ -0.79
LINC00649-213ENST00000608431 CARMIL1Q5VZK9 1371 aa10.11□□□□□ -0.79
LINC00649-213ENST00000608431 CFAP74Q9C0B2 1584 aa10.09□□□□□ -0.79
LINC00649-213ENST00000608431 ZMYM4Q5VZL5 1548 aa10.08□□□□□ -0.8
LINC00649-213ENST00000608431 ZFYVE16Q7Z3T8 1539 aa10.07□□□□□ -0.8
LINC00649-213ENST00000608431 ARHGEF12Q9NZN5 1544 aa10.07□□□□□ -0.8
LINC00649-213ENST00000608431 DENND4BO75064 1496 aaPredicted RBP10.07□□□□□ -0.8
LINC00649-213ENST00000608431 CTTNBP2Q8WZ74 1663 aa10.06□□□□□ -0.8
LINC00649-213ENST00000608431 MAGI2Q86UL8 1455 aa10.06□□□□□ -0.8
LINC00649-213ENST00000608431 FHOD3Q2V2M9 1422 aa10.06□□□□□ -0.8
LINC00649-213ENST00000608431 GOLGA3Q08378 1498 aa10.05□□□□□ -0.8
LINC00649-213ENST00000608431 MLECQ14165 292 aa10.05□□□□□ -0.8
LINC00649-213ENST00000608431 POTEDQ86YR6 584 aa10.05□□□□□ -0.8
LINC00649-213ENST00000608431 ATF5Q9Y2D1 282 aaPredicted RBP10.05□□□□□ -0.8
LINC00649-213ENST00000608431 SRCAPQ6ZRS2 3230 aa10.05□□□□□ -0.8
LINC00649-213ENST00000608431 C3P01024 1663 aa10.03□□□□□ -0.8
LINC00649-213ENST00000608431 FAM9AQ8IZU1 332 aaPredicted RBP10.03□□□□□ -0.8
LINC00649-213ENST00000608431 SUPT6HQ7KZ85 1726 aaKnown RBP10.02□□□□□ -0.8
LINC00649-213ENST00000608431 HSPA1LP34931 641 aa10.02□□□□□ -0.81
LINC00649-213ENST00000608431 NCOA1Q15788 1441 aa10.01□□□□□ -0.81
LINC00649-213ENST00000608431 CEBPAP49715 358 aaPredicted RBP10□□□□□ -0.81
LINC00649-213ENST00000608431 HECW1Q76N89 1606 aa9.99□□□□□ -0.81
LINC00649-213ENST00000608431 ATP10BO94823 1461 aa9.98□□□□□ -0.81
LINC00649-213ENST00000608431 CAMSAP1Q5T5Y3 1602 aa9.97□□□□□ -0.81
LINC00649-213ENST00000608431 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.97□□□□□ -0.81
LINC00649-213ENST00000608431 TOM1O60784 492 aa9.97□□□□□ -0.81
LINC00649-213ENST00000608431 HNRNPUL2Q1KMD3 747 aaKnown RBP9.97□□□□□ -0.81
LINC00649-213ENST00000608431 SAMD1Q6SPF0 538 aaPredicted RBP9.97□□□□□ -0.81
LINC00649-213ENST00000608431 C9orf84Q5VXU9 1444 aa9.97□□□□□ -0.81
LINC00649-213ENST00000608431 ATP10AO60312 1499 aa9.97□□□□□ -0.81
LINC00649-213ENST00000608431 RAPGEF2Q9Y4G8 1499 aa9.97□□□□□ -0.81
LINC00649-213ENST00000608431 ZNF335Q9H4Z2 1342 aaPredicted RBP9.96□□□□□ -0.82
LINC00649-213ENST00000608431 PIP4K2BP78356 416 aa9.95□□□□□ -0.82
LINC00649-213ENST00000608431 TRAPPC8Q9Y2L5 1435 aa9.94□□□□□ -0.82
LINC00649-213ENST00000608431 ZNF142P52746 1687 aaPredicted RBP9.91□□□□□ -0.82
LINC00649-213ENST00000608431 ARID3CA6NKF2 412 aa9.91□□□□□ -0.82
LINC00649-213ENST00000608431 ESF1Q9H501 851 aaKnown RBP9.91□□□□□ -0.82
LINC00649-213ENST00000608431 RAPGEF6Q8TEU7 1601 aa9.91□□□□□ -0.82
LINC00649-213ENST00000608431 CPS1P31327 1500 aa9.91□□□□□ -0.82
LINC00649-213ENST00000608431 PKD2Q13563 968 aa9.9□□□□□ -0.82
LINC00649-213ENST00000608431 PTPRKQ15262 1439 aa9.9□□□□□ -0.83
LINC00649-213ENST00000608431 MROH2AA6NES4 1674 aa9.9□□□□□ -0.83
LINC00649-213ENST00000608431 RNF39Q9H2S5 420 aa9.89□□□□□ -0.83
LINC00649-213ENST00000608431 PLA2R1Q13018 1463 aa9.89□□□□□ -0.83
LINC00649-213ENST00000608431 REREQ9P2R6 1566 aa9.88□□□□□ -0.83
LINC00649-213ENST00000608431 SETD1AO15047 1707 aaKnown RBP9.87□□□□□ -0.83
LINC00649-213ENST00000608431 POLR1AO95602 1720 aaPredicted RBP9.87□□□□□ -0.83
LINC00649-213ENST00000608431 NCKAP5LQ9HCH0 1330 aa9.87□□□□□ -0.83
LINC00649-213ENST00000608431 AGLP35573 1532 aa9.87□□□□□ -0.83
LINC00649-213ENST00000608431 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.87□□□□□ -0.83
LINC00649-213ENST00000608431 NPATQ14207 1427 aa9.86□□□□□ -0.83
LINC00649-213ENST00000608431 SCAPERQ9BY12 1400 aa9.86□□□□□ -0.83
LINC00649-213ENST00000608431 CNTLNQ9NXG0 1405 aa9.86□□□□□ -0.83
LINC00649-213ENST00000608431 RGS17Q9UGC6 210 aaPredicted RBP9.86□□□□□ -0.83
LINC00649-213ENST00000608431 TCOF1Q13428 1488 aaKnown RBP9.85□□□□□ -0.83
LINC00649-213ENST00000608431 MYO3AQ8NEV4 1616 aa9.85□□□□□ -0.83
LINC00649-213ENST00000608431 MYO5CQ9NQX4 1742 aa9.85□□□□□ -0.83
LINC00649-213ENST00000608431 PLEKHD1A6NEE1 506 aa9.83□□□□□ -0.84
LINC00649-213ENST00000608431 ZNF518AQ6AHZ1 1483 aa9.83□□□□□ -0.84
LINC00649-213ENST00000608431 DIP2CQ9Y2E4 1556 aa9.83□□□□□ -0.84
LINC00649-213ENST00000608431 KDM5CP41229 1560 aa9.82□□□□□ -0.84
LINC00649-213ENST00000608431 CEP170BQ9Y4F5 1589 aaPredicted RBP9.82□□□□□ -0.84
LINC00649-213ENST00000608431 ALKQ9UM73 1620 aa9.82□□□□□ -0.84
LINC00649-213ENST00000608431 SHANK2Q9UPX8 1470 aa9.81□□□□□ -0.84
LINC00649-213ENST00000608431 ZNF219Q9P2Y4 722 aaPredicted RBP9.8□□□□□ -0.84
LINC00649-213ENST00000608431 NUP153P49790 1475 aaKnown RBP9.79□□□□□ -0.84
LINC00649-213ENST00000608431 ABCA6Q8N139 1617 aa9.79□□□□□ -0.84
LINC00649-213ENST00000608431 RNF17Q9BXT8 1623 aaKnown RBP9.79□□□□□ -0.84
LINC00649-213ENST00000608431 POTEAQ6S8J7 498 aa9.79□□□□□ -0.84
LINC00649-213ENST00000608431 SPINK5Q9NQ38 1064 aaPredicted RBP9.79□□□□□ -0.84
LINC00649-213ENST00000608431 PLCH2O75038 1416 aa9.79□□□□□ -0.84
LINC00649-213ENST00000608431 SAMD9Q5K651 1589 aa9.79□□□□□ -0.84
LINC00649-213ENST00000608431 SUPT5HO00267 1087 aaKnown RBP9.78□□□□□ -0.84
LINC00649-213ENST00000608431 MYT1LQ9UL68 1186 aa9.78□□□□□ -0.84
LINC00649-213ENST00000608431 APLP2Q06481 763 aa9.76□□□□□ -0.85
LINC00649-213ENST00000608431 P3H3Q8IVL6 736 aa9.76□□□□□ -0.85
LINC00649-213ENST00000608431 CLTCQ00610 1675 aaKnown RBP9.76□□□□□ -0.85
LINC00649-213ENST00000608431 SYNMO15061 1565 aa9.75□□□□□ -0.85
LINC00649-213ENST00000608431 EFCAB2Q5VUJ9 269 aa9.75□□□□□ -0.85
LINC00649-213ENST00000608431 UPF1Q92900 1129 aaKnown RBP eCLIP9.75□□□□□ -0.85
LINC00649-213ENST00000608431 DNMT1P26358 1616 aaKnown RBP9.74□□□□□ -0.85
LINC00649-213ENST00000608431 MLH3Q9UHC1 1453 aa9.74□□□□□ -0.85
LINC00649-213ENST00000608431 VWDEQ8N2E2 1590 aa9.74□□□□□ -0.85
LINC00649-213ENST00000608431 NEURL4Q96JN8 1562 aa9.74□□□□□ -0.85
LINC00649-213ENST00000608431 ZMYM3Q14202 1370 aa9.74□□□□□ -0.85
LINC00649-213ENST00000608431 C1QBPQ07021 282 aaKnown RBP9.73□□□□□ -0.85
LINC00649-213ENST00000608431 A2ML1A8K2U0 1454 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 10.2 ms