RNA–Protein interactions for RNA: ENST00000608263.5

CTCFL-216, Transcript of CCCTC-binding factor like, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTCFL, Length 4,040 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-216ENST00000608263 ERICH3Q5RHP9 1530 aa13.75□□□□□ -0.21
CTCFL-216ENST00000608263 WDR43Q15061 677 aaKnown RBP eCLIP13.74□□□□□ -0.21
CTCFL-216ENST00000608263 FGD6Q6ZV73 1430 aa13.74□□□□□ -0.21
CTCFL-216ENST00000608263 ZBTB7CA1YPR0 619 aa13.74□□□□□ -0.21
CTCFL-216ENST00000608263 CARMIL2Q6F5E8 1435 aa13.73□□□□□ -0.21
CTCFL-216ENST00000608263 OSCARQ8IYS5 282 aa13.72□□□□□ -0.21
CTCFL-216ENST00000608263 HNRNPMP52272 730 aaKnown RBP eCLIP13.72□□□□□ -0.21
CTCFL-216ENST00000608263 EIF5BO60841 1220 aaKnown RBP13.71□□□□□ -0.21
CTCFL-216ENST00000608263 RGS3P49796 1198 aa13.71□□□□□ -0.22
CTCFL-216ENST00000608263 A0A0G2JS52 829 aa13.69□□□□□ -0.22
CTCFL-216ENST00000608263 NEFMP07197 916 aa13.69□□□□□ -0.22
CTCFL-216ENST00000608263 NEUROD2Q15784 382 aa13.69□□□□□ -0.22
CTCFL-216ENST00000608263 NUDCQ9Y266 331 aa13.68□□□□□ -0.22
CTCFL-216ENST00000608263 SAFB2Q14151 953 aaKnown RBP eCLIP13.68□□□□□ -0.22
CTCFL-216ENST00000608263 ST20-MTHFSA0A0A6YYL1 179 aa13.68□□□□□ -0.22
CTCFL-216ENST00000608263 NBPF8Q3BBV2 869 aa13.67□□□□□ -0.22
CTCFL-216ENST00000608263 CFTRP13569 1480 aa13.67□□□□□ -0.22
CTCFL-216ENST00000608263 KIF7Q2M1P5 1343 aa13.67□□□□□ -0.22
CTCFL-216ENST00000608263 UACAQ9BZF9 1416 aa13.67□□□□□ -0.22
CTCFL-216ENST00000608263 C11orf95C9JLR9 678 aaPredicted RBP13.67□□□□□ -0.22
CTCFL-216ENST00000608263 NUP155O75694 1391 aa13.66□□□□□ -0.22
CTCFL-216ENST00000608263 PLIN1O60240 522 aa13.66□□□□□ -0.22
CTCFL-216ENST00000608263 MSH5O43196 834 aa13.65□□□□□ -0.22
CTCFL-216ENST00000608263 TIAM1Q13009 1591 aa13.65□□□□□ -0.22
CTCFL-216ENST00000608263 TNNT2P45379 298 aaPredicted RBP13.65□□□□□ -0.22
CTCFL-216ENST00000608263 RCAN3Q9UKA8 241 aa13.64□□□□□ -0.23
CTCFL-216ENST00000608263 EFCAB2Q5VUJ9 269 aa13.64□□□□□ -0.23
CTCFL-216ENST00000608263 LMOD2Q6P5Q4 547 aa13.64□□□□□ -0.23
CTCFL-216ENST00000608263 CCDC7Q96M83 1385 aa13.64□□□□□ -0.23
CTCFL-216ENST00000608263 ZBED9Q6R2W3 1325 aa13.63□□□□□ -0.23
CTCFL-216ENST00000608263 KNSTRNQ9Y448 316 aa13.63□□□□□ -0.23
CTCFL-216ENST00000608263 KIF3BO15066 747 aa13.62□□□□□ -0.23
CTCFL-216ENST00000608263 MYOM3Q5VTT5 1437 aa13.62□□□□□ -0.23
CTCFL-216ENST00000608263 ERICH6BQ5W0A0 696 aa13.62□□□□□ -0.23
CTCFL-216ENST00000608263 EXOC6Q8TAG9 804 aa13.62□□□□□ -0.23
CTCFL-216ENST00000608263 NUTM2DQ5VT03 806 aaPredicted RBP13.62□□□□□ -0.23
CTCFL-216ENST00000608263 GAPVD1Q14C86 1478 aa13.62□□□□□ -0.23
CTCFL-216ENST00000608263 NCOA2Q15596 1464 aa13.62□□□□□ -0.23
CTCFL-216ENST00000608263 PPM1GO15355 546 aaPredicted RBP13.61□□□□□ -0.23
CTCFL-216ENST00000608263 CASKIN1Q8WXD9 1431 aa13.6□□□□□ -0.23
CTCFL-216ENST00000608263 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.6□□□□□ -0.23
CTCFL-216ENST00000608263 PTPRGP23470 1445 aa13.6□□□□□ -0.23
CTCFL-216ENST00000608263 MAPKBP1O60336 1514 aa13.59□□□□□ -0.23
CTCFL-216ENST00000608263 FANCIQ9NVI1 1328 aa13.59□□□□□ -0.23
CTCFL-216ENST00000608263 USP47Q96K76 1375 aa13.58□□□□□ -0.24
CTCFL-216ENST00000608263 PAK3O75914 559 aaPredicted RBP13.58□□□□□ -0.24
CTCFL-216ENST00000608263 STK26Q9P289 416 aa13.58□□□□□ -0.24
CTCFL-216ENST00000608263 FRAT1Q92837 279 aaPredicted RBP13.58□□□□□ -0.24
CTCFL-216ENST00000608263 IPO9Q96P70 1041 aaKnown RBP13.58□□□□□ -0.24
CTCFL-216ENST00000608263 ROCK2O75116 1388 aaKnown RBP13.58□□□□□ -0.24
CTCFL-216ENST00000608263 SOX12O15370 315 aa13.57□□□□□ -0.24
CTCFL-216ENST00000608263 SLC4A3P48751 1232 aa13.57□□□□□ -0.24
CTCFL-216ENST00000608263 AKNAQ7Z591 1439 aa13.56□□□□□ -0.24
CTCFL-216ENST00000608263 CNTLNQ9NXG0 1405 aa13.56□□□□□ -0.24
CTCFL-216ENST00000608263 POGKQ9P215 609 aa13.56□□□□□ -0.24
CTCFL-216ENST00000608263 NAIPQ13075 1403 aa13.55□□□□□ -0.24
CTCFL-216ENST00000608263 TMF1P82094 1093 aa13.54□□□□□ -0.24
CTCFL-216ENST00000608263 HFM1A2PYH4 1435 aa13.53□□□□□ -0.24
CTCFL-216ENST00000608263 KTN1Q86UP2 1357 aaKnown RBP13.53□□□□□ -0.24
CTCFL-216ENST00000608263 PCF11O94913 1555 aaKnown RBP13.53□□□□□ -0.24
CTCFL-216ENST00000608263 CCDC146Q8IYE0 955 aa13.53□□□□□ -0.24
CTCFL-216ENST00000608263 FAM69CQ0P6D2 419 aa13.53□□□□□ -0.24
CTCFL-216ENST00000608263 CDCA7LQ96GN5 454 aa13.52□□□□□ -0.24
CTCFL-216ENST00000608263 FYCO1Q9BQS8 1478 aa13.52□□□□□ -0.24
CTCFL-216ENST00000608263 ANKRD30AQ9BXX3 1397 aa13.52□□□□□ -0.25
CTCFL-216ENST00000608263 SPAG9O60271 1321 aaKnown RBP13.52□□□□□ -0.25
CTCFL-216ENST00000608263 HAP1P54257 671 aaPredicted RBP13.51□□□□□ -0.25
CTCFL-216ENST00000608263 NLRP13Q86W25 1043 aa13.51□□□□□ -0.25
CTCFL-216ENST00000608263 PTPRKQ15262 1439 aa13.51□□□□□ -0.25
CTCFL-216ENST00000608263 RALBP1Q15311 655 aa13.51□□□□□ -0.25
CTCFL-216ENST00000608263 UPF2Q9HAU5 1272 aaKnown RBP13.51□□□□□ -0.25
CTCFL-216ENST00000608263 DDRGK1Q96HY6 314 aa13.51□□□□□ -0.25
CTCFL-216ENST00000608263 PANK3Q9H999 370 aa13.51□□□□□ -0.25
CTCFL-216ENST00000608263 POLA1P09884 1462 aaPredicted RBP13.5□□□□□ -0.25
CTCFL-216ENST00000608263 PDE4AP27815 886 aa13.5□□□□□ -0.25
CTCFL-216ENST00000608263 RRP1P56182 461 aaKnown RBP13.5□□□□□ -0.25
CTCFL-216ENST00000608263 LAMC3Q9Y6N6 1575 aa13.49□□□□□ -0.25
CTCFL-216ENST00000608263 SKAP1Q86WV1 359 aa13.49□□□□□ -0.25
CTCFL-216ENST00000608263 SPRYD3Q8NCJ5 442 aa13.48□□□□□ -0.25
CTCFL-216ENST00000608263 CRBNQ96SW2 442 aa13.48□□□□□ -0.25
CTCFL-216ENST00000608263 MYBBP1AQ9BQG0 1328 aaKnown RBP13.48□□□□□ -0.25
CTCFL-216ENST00000608263 NUTM2FA1L443 756 aa13.48□□□□□ -0.25
CTCFL-216ENST00000608263 TCERG1O14776 1098 aaKnown RBP13.48□□□□□ -0.25
CTCFL-216ENST00000608263 WASHC2CQ9Y4E1 1318 aa13.47□□□□□ -0.25
CTCFL-216ENST00000608263 HSP90AA1P07900 732 aaKnown RBP13.46□□□□□ -0.25
CTCFL-216ENST00000608263 KIF15Q9NS87 1388 aa13.46□□□□□ -0.26
CTCFL-216ENST00000608263 ZBTB4Q9P1Z0 1013 aaPredicted RBP13.45□□□□□ -0.26
CTCFL-216ENST00000608263 KANK1Q14678 1352 aa13.45□□□□□ -0.26
CTCFL-216ENST00000608263 NBPF1Q3BBV0 1214 aa13.45□□□□□ -0.26
CTCFL-216ENST00000608263 TOPBP1Q92547 1522 aa13.45□□□□□ -0.26
CTCFL-216ENST00000608263 BIVM-ERCC5R4GMW8 1640 aa13.44□□□□□ -0.26
CTCFL-216ENST00000608263 SRPK2P78362 688 aaKnown RBP13.43□□□□□ -0.26
CTCFL-216ENST00000608263 PNISRQ8TF01 805 aaKnown RBP13.43□□□□□ -0.26
CTCFL-216ENST00000608263 SLKQ9H2G2 1235 aaPredicted RBP13.43□□□□□ -0.26
CTCFL-216ENST00000608263 AFAP1Q8N556 730 aa13.42□□□□□ -0.26
CTCFL-216ENST00000608263 CDK13Q14004 1512 aaKnown RBP13.42□□□□□ -0.26
CTCFL-216ENST00000608263 CLUAP1Q96AJ1 413 aa13.42□□□□□ -0.26
CTCFL-216ENST00000608263 CDCA8Q53HL2 280 aa13.41□□□□□ -0.26
CTCFL-216ENST00000608263 RRP7AQ9Y3A4 280 aaKnown RBP13.41□□□□□ -0.26
CTCFL-216ENST00000608263 U2SURPO15042 1029 aaKnown RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms