RNA–Protein interactions for RNA: ENST00000607272.2

MSH6-212, Transcript of mutS homolog 6, humanhuman

TSL 2

Gene MSH6, Length 2,219 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-212ENST00000607272 GCC2Q8IWJ2 1684 aa17.13■□□□□ 0.33
MSH6-212ENST00000607272 MYT1LQ9UL68 1186 aa17.13■□□□□ 0.33
MSH6-212ENST00000607272 ZBED9Q6R2W3 1325 aa17.13■□□□□ 0.33
MSH6-212ENST00000607272 NCOA1Q15788 1441 aa17.12■□□□□ 0.33
MSH6-212ENST00000607272 MPHOSPH9Q99550 1183 aa17.12■□□□□ 0.33
MSH6-212ENST00000607272 CCDC7Q96M83 1385 aa17.12■□□□□ 0.33
MSH6-212ENST00000607272 CHIC2Q9UKJ5 165 aa17.11■□□□□ 0.33
MSH6-212ENST00000607272 L3MBTL2Q969R5 705 aa17.11■□□□□ 0.33
MSH6-212ENST00000607272 CCDC184Q52MB2 194 aa17.09■□□□□ 0.33
MSH6-212ENST00000607272 KIF21AQ7Z4S6 1674 aa17.09■□□□□ 0.33
MSH6-212ENST00000607272 MIA2Q96PC5 1412 aa17.09■□□□□ 0.33
MSH6-212ENST00000607272 MRS2Q9HD23 443 aa17.09■□□□□ 0.33
MSH6-212ENST00000607272 FAM9BQ8IZU0 186 aa17.08■□□□□ 0.32
MSH6-212ENST00000607272 ABCA5Q8WWZ7 1642 aa17.08■□□□□ 0.32
MSH6-212ENST00000607272 GAPVD1Q14C86 1478 aa17.07■□□□□ 0.32
MSH6-212ENST00000607272 TDRD9Q8NDG6 1382 aaKnown RBP17.07■□□□□ 0.32
MSH6-212ENST00000607272 MAGI3Q5TCQ9 1506 aa17.07■□□□□ 0.32
MSH6-212ENST00000607272 C11orf95C9JLR9 678 aaPredicted RBP17.06■□□□□ 0.32
MSH6-212ENST00000607272 URB2Q14146 1524 aaKnown RBP17.04■□□□□ 0.32
MSH6-212ENST00000607272 NESP48681 1621 aa17.04■□□□□ 0.32
MSH6-212ENST00000607272 ANKRD30BQ9BXX2 1392 aa17.02■□□□□ 0.32
MSH6-212ENST00000607272 RPRD2Q5VT52 1461 aaKnown RBP17.02■□□□□ 0.32
MSH6-212ENST00000607272 KDM6BO15054 1643 aa17.02■□□□□ 0.32
MSH6-212ENST00000607272 B4GALNT3Q6L9W6 998 aa17.02■□□□□ 0.32
MSH6-212ENST00000607272 ROCK1Q13464 1354 aa17.01■□□□□ 0.31
MSH6-212ENST00000607272 SPATA31E1Q6ZUB1 1445 aa17.01■□□□□ 0.31
MSH6-212ENST00000607272 EPRSP07814 1512 aaKnown RBP17■□□□□ 0.31
MSH6-212ENST00000607272 KIF7Q2M1P5 1343 aa16.99■□□□□ 0.31
MSH6-212ENST00000607272 NBPF8Q3BBV2 869 aa16.99■□□□□ 0.31
MSH6-212ENST00000607272 TEX14Q8IWB6 1497 aa16.98■□□□□ 0.31
MSH6-212ENST00000607272 PLCB2Q00722 1185 aa16.98■□□□□ 0.31
MSH6-212ENST00000607272 LAMC3Q9Y6N6 1575 aa16.98■□□□□ 0.31
MSH6-212ENST00000607272 SMG6Q86US8 1419 aaKnown RBP16.97■□□□□ 0.31
MSH6-212ENST00000607272 POLR1AO95602 1720 aaPredicted RBP16.95■□□□□ 0.3
MSH6-212ENST00000607272 DAPK1P53355 1430 aa16.94■□□□□ 0.3
MSH6-212ENST00000607272 NOP58Q9Y2X3 529 aaKnown RBP16.92■□□□□ 0.3
MSH6-212ENST00000607272 RNF123Q5XPI4 1314 aa16.92■□□□□ 0.3
MSH6-212ENST00000607272 NUDCQ9Y266 331 aa16.91■□□□□ 0.3
MSH6-212ENST00000607272 PDS5BQ9NTI5 1447 aa16.91■□□□□ 0.3
MSH6-212ENST00000607272 CDK13Q14004 1512 aaKnown RBP16.91■□□□□ 0.3
MSH6-212ENST00000607272 IQGAP2Q13576 1575 aa16.9■□□□□ 0.3
MSH6-212ENST00000607272 WDR62O43379 1518 aa16.9■□□□□ 0.3
MSH6-212ENST00000607272 ARID4BQ4LE39 1312 aaPredicted RBP16.9■□□□□ 0.3
MSH6-212ENST00000607272 ABCC5O15440 1437 aa16.89■□□□□ 0.29
MSH6-212ENST00000607272 DHX29Q7Z478 1369 aaKnown RBP16.89■□□□□ 0.29
MSH6-212ENST00000607272 DNMT1P26358 1616 aaKnown RBP16.88■□□□□ 0.29
MSH6-212ENST00000607272 DEKP35659 375 aaKnown RBP16.87■□□□□ 0.29
MSH6-212ENST00000607272 CCDC136Q96JN2 1154 aa16.86■□□□□ 0.29
MSH6-212ENST00000607272 TAOK2Q9UL54 1235 aa16.86■□□□□ 0.29
MSH6-212ENST00000607272 TARBP1Q13395 1621 aaKnown RBP16.84■□□□□ 0.29
MSH6-212ENST00000607272 DNAJC5BQ9UF47 199 aa16.84■□□□□ 0.29
MSH6-212ENST00000607272 ANP32AP39687 249 aaKnown RBP16.83■□□□□ 0.28
MSH6-212ENST00000607272 USP47Q96K76 1375 aa16.83■□□□□ 0.28
MSH6-212ENST00000607272 MBD5Q9P267 1494 aa16.82■□□□□ 0.28
MSH6-212ENST00000607272 ROCK2O75116 1388 aaKnown RBP16.82■□□□□ 0.28
MSH6-212ENST00000607272 IPO9Q96P70 1041 aaKnown RBP16.81■□□□□ 0.28
MSH6-212ENST00000607272 ARID3CA6NKF2 412 aa16.81■□□□□ 0.28
MSH6-212ENST00000607272 PZPP20742 1482 aa16.81■□□□□ 0.28
MSH6-212ENST00000607272 ZNF644Q9H582 1327 aaPredicted RBP16.8■□□□□ 0.28
MSH6-212ENST00000607272 HAP1P54257 671 aaPredicted RBP16.8■□□□□ 0.28
MSH6-212ENST00000607272 PNISRQ8TF01 805 aaKnown RBP16.8■□□□□ 0.28
MSH6-212ENST00000607272 PAK3O75914 559 aaPredicted RBP16.8■□□□□ 0.28
MSH6-212ENST00000607272 KIAA1107Q9UPP5 1409 aa16.79■□□□□ 0.28
MSH6-212ENST00000607272 PBRM1Q86U86 1689 aa16.78■□□□□ 0.28
MSH6-212ENST00000607272 ADAMTS12P58397 1594 aa16.78■□□□□ 0.28
MSH6-212ENST00000607272 TMC1Q8TDI8 760 aa16.78■□□□□ 0.28
MSH6-212ENST00000607272 NBR1Q14596 966 aa16.76■□□□□ 0.27
MSH6-212ENST00000607272 POLR3GLQ9BT43 218 aa16.76■□□□□ 0.27
MSH6-212ENST00000607272 BCORL1Q5H9F3 1711 aa16.76■□□□□ 0.27
MSH6-212ENST00000607272 ZBTB47Q9UFB7 747 aaPredicted RBP16.76■□□□□ 0.27
MSH6-212ENST00000607272 KIF14Q15058 1648 aa16.75■□□□□ 0.27
MSH6-212ENST00000607272 KTN1Q86UP2 1357 aaKnown RBP16.75■□□□□ 0.27
MSH6-212ENST00000607272 NUP153P49790 1475 aaKnown RBP16.74■□□□□ 0.27
MSH6-212ENST00000607272 KDM5CP41229 1560 aa16.74■□□□□ 0.27
MSH6-212ENST00000607272 KIF15Q9NS87 1388 aa16.74■□□□□ 0.27
MSH6-212ENST00000607272 UHRF1BP1Q6BDS2 1440 aa16.74■□□□□ 0.27
MSH6-212ENST00000607272 ZNF326Q5BKZ1 582 aaKnown RBP16.73■□□□□ 0.27
MSH6-212ENST00000607272 PKD2Q13563 968 aa16.73■□□□□ 0.27
MSH6-212ENST00000607272 CNGB1Q14028 1251 aaPredicted RBP16.73■□□□□ 0.27
MSH6-212ENST00000607272 CFDP1Q9UEE9 299 aaPredicted RBP16.73■□□□□ 0.27
MSH6-212ENST00000607272 ADGRL2O95490 1459 aa16.72■□□□□ 0.27
MSH6-212ENST00000607272 BRD4O60885 1362 aaPredicted RBP16.72■□□□□ 0.27
MSH6-212ENST00000607272 LRPPRCP42704 1394 aaKnown RBP16.72■□□□□ 0.27
MSH6-212ENST00000607272 CAMSAP2Q08AD1 1489 aa16.71■□□□□ 0.27
MSH6-212ENST00000607272 RALBP1Q15311 655 aa16.71■□□□□ 0.27
MSH6-212ENST00000607272 RTL5Q5HYW3 569 aaPredicted RBP16.71■□□□□ 0.27
MSH6-212ENST00000607272 RALGAPBQ86X10 1494 aa16.71■□□□□ 0.27
MSH6-212ENST00000607272 KIAA0586Q9BVV6 1533 aa16.71■□□□□ 0.26
MSH6-212ENST00000607272 TROQ12816 1431 aaPredicted RBP16.7■□□□□ 0.26
MSH6-212ENST00000607272 KIAA0556O60303 1618 aa16.7■□□□□ 0.26
MSH6-212ENST00000607272 MYBBP1AQ9BQG0 1328 aaKnown RBP16.7■□□□□ 0.26
MSH6-212ENST00000607272 DISP1Q96F81 1524 aa16.7■□□□□ 0.26
MSH6-212ENST00000607272 ANKRD30AQ9BXX3 1397 aa16.7■□□□□ 0.26
MSH6-212ENST00000607272 RAPGEF6Q8TEU7 1601 aa16.69■□□□□ 0.26
MSH6-212ENST00000607272 ADGBQ8N7X0 1667 aa16.69■□□□□ 0.26
MSH6-212ENST00000607272 SLC4A2P04920 1241 aa16.69■□□□□ 0.26
MSH6-212ENST00000607272 CARD11Q9BXL7 1154 aa16.69■□□□□ 0.26
MSH6-212ENST00000607272 TCERG1O14776 1098 aaKnown RBP16.68■□□□□ 0.26
MSH6-212ENST00000607272 RRP1P56182 461 aaKnown RBP16.68■□□□□ 0.26
MSH6-212ENST00000607272 ARHGEF12Q9NZN5 1544 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms