RNA–Protein interactions for RNA: ENST00000604213.1

LYSMD4-211, Transcript of LysM domain containing 4, humanhuman

TSL 1 (best)

Gene LYSMD4, Length 2,356 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-211ENST00000604213 KIF7Q2M1P5 1343 aa20.83■□□□□ 0.92
LYSMD4-211ENST00000604213 TDRD9Q8NDG6 1382 aaKnown RBP20.82■□□□□ 0.92
LYSMD4-211ENST00000604213 ANKRD30BQ9BXX2 1392 aa20.82■□□□□ 0.92
LYSMD4-211ENST00000604213 RPRD2Q5VT52 1461 aaKnown RBP20.81■□□□□ 0.92
LYSMD4-211ENST00000604213 NESP48681 1621 aa20.81■□□□□ 0.92
LYSMD4-211ENST00000604213 DEKP35659 375 aaKnown RBP20.81■□□□□ 0.92
LYSMD4-211ENST00000604213 MIA2Q96PC5 1412 aa20.81■□□□□ 0.92
LYSMD4-211ENST00000604213 TEX14Q8IWB6 1497 aa20.8■□□□□ 0.92
LYSMD4-211ENST00000604213 SMG6Q86US8 1419 aaKnown RBP20.8■□□□□ 0.92
LYSMD4-211ENST00000604213 GAPVD1Q14C86 1478 aa20.79■□□□□ 0.92
LYSMD4-211ENST00000604213 NOP58Q9Y2X3 529 aaKnown RBP20.79■□□□□ 0.92
LYSMD4-211ENST00000604213 URB2Q14146 1524 aaKnown RBP20.79■□□□□ 0.92
LYSMD4-211ENST00000604213 POLR1AO95602 1720 aaPredicted RBP20.78■□□□□ 0.92
LYSMD4-211ENST00000604213 RNF123Q5XPI4 1314 aa20.75■□□□□ 0.91
LYSMD4-211ENST00000604213 EPRSP07814 1512 aaKnown RBP20.75■□□□□ 0.91
LYSMD4-211ENST00000604213 PAK3O75914 559 aaPredicted RBP20.74■□□□□ 0.91
LYSMD4-211ENST00000604213 LAMC3Q9Y6N6 1575 aa20.73■□□□□ 0.91
LYSMD4-211ENST00000604213 ROCK1Q13464 1354 aa20.73■□□□□ 0.91
LYSMD4-211ENST00000604213 DHX29Q7Z478 1369 aaKnown RBP20.72■□□□□ 0.91
LYSMD4-211ENST00000604213 NUDCQ9Y266 331 aa20.72■□□□□ 0.91
LYSMD4-211ENST00000604213 CDK13Q14004 1512 aaKnown RBP20.7■□□□□ 0.9
LYSMD4-211ENST00000604213 DAPK1P53355 1430 aa20.69■□□□□ 0.9
LYSMD4-211ENST00000604213 ABCC5O15440 1437 aa20.66■□□□□ 0.9
LYSMD4-211ENST00000604213 NBR1Q14596 966 aa20.66■□□□□ 0.9
LYSMD4-211ENST00000604213 CCDC136Q96JN2 1154 aa20.66■□□□□ 0.9
LYSMD4-211ENST00000604213 SLC4A1APQ9BWU0 796 aaKnown RBP20.65■□□□□ 0.9
LYSMD4-211ENST00000604213 WDR62O43379 1518 aa20.65■□□□□ 0.9
LYSMD4-211ENST00000604213 IPO9Q96P70 1041 aaKnown RBP20.64■□□□□ 0.89
LYSMD4-211ENST00000604213 DNMT1P26358 1616 aaKnown RBP20.63■□□□□ 0.89
LYSMD4-211ENST00000604213 MBD5Q9P267 1494 aa20.62■□□□□ 0.89
LYSMD4-211ENST00000604213 ANP32AP39687 249 aaKnown RBP20.61■□□□□ 0.89
LYSMD4-211ENST00000604213 BCORL1Q5H9F3 1711 aa20.61■□□□□ 0.89
LYSMD4-211ENST00000604213 IQGAP2Q13576 1575 aa20.6■□□□□ 0.89
LYSMD4-211ENST00000604213 PZPP20742 1482 aa20.59■□□□□ 0.89
LYSMD4-211ENST00000604213 ARID3CA6NKF2 412 aa20.59■□□□□ 0.89
LYSMD4-211ENST00000604213 USP47Q96K76 1375 aa20.58■□□□□ 0.89
LYSMD4-211ENST00000604213 DNAJC5BQ9UF47 199 aa20.58■□□□□ 0.89
LYSMD4-211ENST00000604213 PNISRQ8TF01 805 aaKnown RBP20.58■□□□□ 0.88
LYSMD4-211ENST00000604213 ZNF644Q9H582 1327 aaPredicted RBP20.58■□□□□ 0.88
LYSMD4-211ENST00000604213 CNGB1Q14028 1251 aaPredicted RBP20.57■□□□□ 0.88
LYSMD4-211ENST00000604213 ARID4BQ4LE39 1312 aaPredicted RBP20.57■□□□□ 0.88
LYSMD4-211ENST00000604213 TARBP1Q13395 1621 aaKnown RBP20.55■□□□□ 0.88
LYSMD4-211ENST00000604213 ZBTB47Q9UFB7 747 aaPredicted RBP20.54■□□□□ 0.88
LYSMD4-211ENST00000604213 POLR3GLQ9BT43 218 aa20.53■□□□□ 0.88
LYSMD4-211ENST00000604213 KDM5CP41229 1560 aa20.52■□□□□ 0.88
LYSMD4-211ENST00000604213 KIF14Q15058 1648 aa20.51■□□□□ 0.87
LYSMD4-211ENST00000604213 KIAA1107Q9UPP5 1409 aa20.51■□□□□ 0.87
LYSMD4-211ENST00000604213 SENP3-EIF4A1A0A087X0R7 540 aa20.5■□□□□ 0.87
LYSMD4-211ENST00000604213 TMC1Q8TDI8 760 aa20.5■□□□□ 0.87
LYSMD4-211ENST00000604213 PDS5BQ9NTI5 1447 aa20.5■□□□□ 0.87
LYSMD4-211ENST00000604213 ROCK2O75116 1388 aaKnown RBP20.49■□□□□ 0.87
LYSMD4-211ENST00000604213 LRPPRCP42704 1394 aaKnown RBP20.49■□□□□ 0.87
LYSMD4-211ENST00000604213 PBRM1Q86U86 1689 aa20.49■□□□□ 0.87
LYSMD4-211ENST00000604213 ZNF326Q5BKZ1 582 aaKnown RBP20.48■□□□□ 0.87
LYSMD4-211ENST00000604213 RTL5Q5HYW3 569 aaPredicted RBP20.48■□□□□ 0.87
LYSMD4-211ENST00000604213 ADAMTS12P58397 1594 aa20.47■□□□□ 0.87
LYSMD4-211ENST00000604213 KIF15Q9NS87 1388 aa20.45■□□□□ 0.86
LYSMD4-211ENST00000604213 UHRF1BP1Q6BDS2 1440 aa20.45■□□□□ 0.86
LYSMD4-211ENST00000604213 NUP153P49790 1475 aaKnown RBP20.45■□□□□ 0.86
LYSMD4-211ENST00000604213 RRP1P56182 461 aaKnown RBP20.44■□□□□ 0.86
LYSMD4-211ENST00000604213 PKD2Q13563 968 aa20.43■□□□□ 0.86
LYSMD4-211ENST00000604213 RALGAPBQ86X10 1494 aa20.43■□□□□ 0.86
LYSMD4-211ENST00000604213 BRD4O60885 1362 aaPredicted RBP20.43■□□□□ 0.86
LYSMD4-211ENST00000604213 CAMSAP2Q08AD1 1489 aa20.42■□□□□ 0.86
LYSMD4-211ENST00000604213 TCERG1O14776 1098 aaKnown RBP20.41■□□□□ 0.86
LYSMD4-211ENST00000604213 EXOC6Q8TAG9 804 aa20.41■□□□□ 0.86
LYSMD4-211ENST00000604213 ADGBQ8N7X0 1667 aa20.41■□□□□ 0.86
LYSMD4-211ENST00000604213 MYBBP1AQ9BQG0 1328 aaKnown RBP20.41■□□□□ 0.86
LYSMD4-211ENST00000604213 ADGRL2O95490 1459 aa20.4■□□□□ 0.86
LYSMD4-211ENST00000604213 KTN1Q86UP2 1357 aaKnown RBP20.4■□□□□ 0.86
LYSMD4-211ENST00000604213 DISP1Q96F81 1524 aa20.39■□□□□ 0.85
LYSMD4-211ENST00000604213 RALBP1Q15311 655 aa20.38■□□□□ 0.85
LYSMD4-211ENST00000604213 KIAA0556O60303 1618 aa20.38■□□□□ 0.85
LYSMD4-211ENST00000604213 CARD11Q9BXL7 1154 aa20.37■□□□□ 0.85
LYSMD4-211ENST00000604213 RAPGEF6Q8TEU7 1601 aa20.37■□□□□ 0.85
LYSMD4-211ENST00000604213 CFDP1Q9UEE9 299 aaPredicted RBP20.37■□□□□ 0.85
LYSMD4-211ENST00000604213 RCAN3Q9UKA8 241 aa20.37■□□□□ 0.85
LYSMD4-211ENST00000604213 PDE4AP27815 886 aa20.36■□□□□ 0.85
LYSMD4-211ENST00000604213 TROQ12816 1431 aaPredicted RBP20.35■□□□□ 0.85
LYSMD4-211ENST00000604213 PRG4Q92954 1404 aaPredicted RBP20.35■□□□□ 0.85
LYSMD4-211ENST00000604213 NPM2Q86SE8 214 aaKnown RBP20.35■□□□□ 0.85
LYSMD4-211ENST00000604213 ARHGEF12Q9NZN5 1544 aa20.35■□□□□ 0.85
LYSMD4-211ENST00000604213 GPATCH8Q9UKJ3 1502 aaKnown RBP20.34■□□□□ 0.85
LYSMD4-211ENST00000604213 ST20-MTHFSA0A0A6YYL1 179 aa20.34■□□□□ 0.85
LYSMD4-211ENST00000604213 BACH2Q9BYV9 841 aa20.34■□□□□ 0.85
LYSMD4-211ENST00000604213 CROCC2H7BZ55 1655 aa20.33■□□□□ 0.85
LYSMD4-211ENST00000604213 MS4A1P11836 297 aa20.33■□□□□ 0.85
LYSMD4-211ENST00000604213 ANKRD30AQ9BXX3 1397 aa20.33■□□□□ 0.85
LYSMD4-211ENST00000604213 KIAA0586Q9BVV6 1533 aa20.32■□□□□ 0.84
LYSMD4-211ENST00000604213 E9PCH4 1651 aa20.32■□□□□ 0.84
LYSMD4-211ENST00000604213 ITSN2Q9NZM3 1697 aa20.32■□□□□ 0.84
LYSMD4-211ENST00000604213 ANKRD50Q9ULJ7 1429 aa20.31■□□□□ 0.84
LYSMD4-211ENST00000604213 PDE3BQ13370 1112 aa20.31■□□□□ 0.84
LYSMD4-211ENST00000604213 USP35Q9P2H5 1018 aa20.29■□□□□ 0.84
LYSMD4-211ENST00000604213 ZNF777Q9ULD5 760 aaPredicted RBP20.28■□□□□ 0.84
LYSMD4-211ENST00000604213 NLRP13Q86W25 1043 aa20.28■□□□□ 0.84
LYSMD4-211ENST00000604213 LAS1LQ9Y4W2 734 aaKnown RBP20.27■□□□□ 0.84
LYSMD4-211ENST00000604213 PARD3Q8TEW0 1356 aa20.27■□□□□ 0.84
LYSMD4-211ENST00000604213 NUP155O75694 1391 aa20.27■□□□□ 0.83
LYSMD4-211ENST00000604213 NEFMP07197 916 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 10 ms