RNA–Protein interactions for RNA: ENST00000604187.1

PDLIM1P1-201, Transcript of PDZ and LIM domain 1 pseudogene 1, humanhuman

BASIC

Gene PDLIM1P1, Length 969 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1P1-201ENST00000604187 DISP3Q9P2K9 1392 aa19.93■□□□□ 0.78
PDLIM1P1-201ENST00000604187 SCAPERQ9BY12 1400 aa19.92■□□□□ 0.78
PDLIM1P1-201ENST00000604187 HECW1Q76N89 1606 aa19.91■□□□□ 0.78
PDLIM1P1-201ENST00000604187 ILDR2Q71H61 639 aa19.89■□□□□ 0.77
PDLIM1P1-201ENST00000604187 ARHGEF12Q9NZN5 1544 aa19.88■□□□□ 0.77
PDLIM1P1-201ENST00000604187 CEBPAP49715 358 aaPredicted RBP19.88■□□□□ 0.77
PDLIM1P1-201ENST00000604187 PLCH2O75038 1416 aa19.87■□□□□ 0.77
PDLIM1P1-201ENST00000604187 C9orf84Q5VXU9 1444 aa19.87■□□□□ 0.77
PDLIM1P1-201ENST00000604187 CDK13Q14004 1512 aaKnown RBP19.86■□□□□ 0.77
PDLIM1P1-201ENST00000604187 ATP10AO60312 1499 aa19.86■□□□□ 0.77
PDLIM1P1-201ENST00000604187 SOCS7O14512 581 aa19.84■□□□□ 0.77
PDLIM1P1-201ENST00000604187 DMRT2Q9Y5R5 561 aa19.84■□□□□ 0.77
PDLIM1P1-201ENST00000604187 FER1L4A9Z1Z3 1794 aa19.84■□□□□ 0.77
PDLIM1P1-201ENST00000604187 EFCAB2Q5VUJ9 269 aa19.81■□□□□ 0.76
PDLIM1P1-201ENST00000604187 EEA1Q15075 1411 aa19.81■□□□□ 0.76
PDLIM1P1-201ENST00000604187 UHRF1BP1Q6BDS2 1440 aa19.81■□□□□ 0.76
PDLIM1P1-201ENST00000604187 PREX1Q8TCU6 1659 aa19.78■□□□□ 0.76
PDLIM1P1-201ENST00000604187 ZNF518AQ6AHZ1 1483 aa19.76■□□□□ 0.75
PDLIM1P1-201ENST00000604187 ATP1B4Q9UN42 357 aaPredicted RBP19.76■□□□□ 0.75
PDLIM1P1-201ENST00000604187 AFAP1Q8N556 730 aa19.75■□□□□ 0.75
PDLIM1P1-201ENST00000604187 MYT1LQ9UL68 1186 aa19.74■□□□□ 0.75
PDLIM1P1-201ENST00000604187 PTPRTO14522 1441 aa19.72■□□□□ 0.75
PDLIM1P1-201ENST00000604187 SPATA31D1Q6ZQQ2 1576 aa19.72■□□□□ 0.75
PDLIM1P1-201ENST00000604187 CDK11AQ9UQ88 783 aaPredicted RBP19.71■□□□□ 0.75
PDLIM1P1-201ENST00000604187 ARHGAP5Q13017 1502 aa19.7■□□□□ 0.74
PDLIM1P1-201ENST00000604187 STRCQ7RTU9 1775 aa19.7■□□□□ 0.74
PDLIM1P1-201ENST00000604187 KDM5CP41229 1560 aa19.7■□□□□ 0.74
PDLIM1P1-201ENST00000604187 FMN1Q68DA7 1419 aa19.68■□□□□ 0.74
PDLIM1P1-201ENST00000604187 DIP2CQ9Y2E4 1556 aa19.68■□□□□ 0.74
PDLIM1P1-201ENST00000604187 KIF14Q15058 1648 aa19.67■□□□□ 0.74
PDLIM1P1-201ENST00000604187 ESF1Q9H501 851 aaKnown RBP19.67■□□□□ 0.74
PDLIM1P1-201ENST00000604187 TROQ12816 1431 aaPredicted RBP19.67■□□□□ 0.74
PDLIM1P1-201ENST00000604187 MYO5CQ9NQX4 1742 aa19.65■□□□□ 0.74
PDLIM1P1-201ENST00000604187 EHMT2Q96KQ7 1210 aa19.65■□□□□ 0.74
PDLIM1P1-201ENST00000604187 CLIP1P30622 1438 aa19.64■□□□□ 0.73
PDLIM1P1-201ENST00000604187 TRAPPC8Q9Y2L5 1435 aa19.64■□□□□ 0.73
PDLIM1P1-201ENST00000604187 REREQ9P2R6 1566 aa19.64■□□□□ 0.73
PDLIM1P1-201ENST00000604187 LTBP4Q8N2S1 1624 aa19.64■□□□□ 0.73
PDLIM1P1-201ENST00000604187 MLH3Q9UHC1 1453 aa19.63■□□□□ 0.73
PDLIM1P1-201ENST00000604187 NCOA1Q15788 1441 aa19.63■□□□□ 0.73
PDLIM1P1-201ENST00000604187 UBTFP17480 764 aaKnown RBP19.61■□□□□ 0.73
PDLIM1P1-201ENST00000604187 ABCA6Q8N139 1617 aa19.61■□□□□ 0.73
PDLIM1P1-201ENST00000604187 AGLP35573 1532 aa19.61■□□□□ 0.73
PDLIM1P1-201ENST00000604187 IQSEC2Q5JU85 1478 aa19.6■□□□□ 0.73
PDLIM1P1-201ENST00000604187 ARHGAP35Q9NRY4 1499 aa19.6■□□□□ 0.73
PDLIM1P1-201ENST00000604187 CNTLNQ9NXG0 1405 aa19.58■□□□□ 0.72
PDLIM1P1-201ENST00000604187 C3P01024 1663 aa19.57■□□□□ 0.72
PDLIM1P1-201ENST00000604187 ABCC1P33527 1531 aa19.56■□□□□ 0.72
PDLIM1P1-201ENST00000604187 ZNF335Q9H4Z2 1342 aaPredicted RBP19.53■□□□□ 0.72
PDLIM1P1-201ENST00000604187 NPATQ14207 1427 aa19.52■□□□□ 0.72
PDLIM1P1-201ENST00000604187 UBAP1LF5GYI3 381 aa19.52■□□□□ 0.72
PDLIM1P1-201ENST00000604187 NCKAP5LQ9HCH0 1330 aa19.51■□□□□ 0.71
PDLIM1P1-201ENST00000604187 CAMSAP1Q5T5Y3 1602 aa19.51■□□□□ 0.71
PDLIM1P1-201ENST00000604187 SETD1BQ9UPS6 1966 aaKnown RBP19.51■□□□□ 0.71
PDLIM1P1-201ENST00000604187 ZMYM3Q14202 1370 aa19.48■□□□□ 0.71
PDLIM1P1-201ENST00000604187 PREX2Q70Z35 1606 aa19.48■□□□□ 0.71
PDLIM1P1-201ENST00000604187 ZNF777Q9ULD5 760 aaPredicted RBP19.46■□□□□ 0.71
PDLIM1P1-201ENST00000604187 CDC42BPBQ9Y5S2 1711 aa19.45■□□□□ 0.7
PDLIM1P1-201ENST00000604187 ITSN2Q9NZM3 1697 aa19.45■□□□□ 0.7
PDLIM1P1-201ENST00000604187 SPAG9O60271 1321 aaKnown RBP19.45■□□□□ 0.7
PDLIM1P1-201ENST00000604187 KIDINS220Q9ULH0 1771 aa19.44■□□□□ 0.7
PDLIM1P1-201ENST00000604187 SAMD9LQ8IVG5 1584 aa19.44■□□□□ 0.7
PDLIM1P1-201ENST00000604187 CCDC18Q5T9S5 1454 aa19.43■□□□□ 0.7
PDLIM1P1-201ENST00000604187 PKD2Q13563 968 aa19.43■□□□□ 0.7
PDLIM1P1-201ENST00000604187 CASKIN1Q8WXD9 1431 aa19.42■□□□□ 0.7
PDLIM1P1-201ENST00000604187 PLA2R1Q13018 1463 aa19.42■□□□□ 0.7
PDLIM1P1-201ENST00000604187 TCOF1Q13428 1488 aaKnown RBP19.41■□□□□ 0.7
PDLIM1P1-201ENST00000604187 SYCP2Q9BX26 1530 aa19.41■□□□□ 0.7
PDLIM1P1-201ENST00000604187 PTPRKQ15262 1439 aa19.4■□□□□ 0.7
PDLIM1P1-201ENST00000604187 MROH2AA6NES4 1674 aa19.4■□□□□ 0.7
PDLIM1P1-201ENST00000604187 LRRIQ1Q96JM4 1722 aa19.39■□□□□ 0.7
PDLIM1P1-201ENST00000604187 PPP6R1Q9UPN7 881 aa19.39■□□□□ 0.69
PDLIM1P1-201ENST00000604187 HNRNPMP52272 730 aaKnown RBP eCLIP19.38■□□□□ 0.69
PDLIM1P1-201ENST00000604187 MYO3AQ8NEV4 1616 aa19.37■□□□□ 0.69
PDLIM1P1-201ENST00000604187 CEP170BQ9Y4F5 1589 aaPredicted RBP19.37■□□□□ 0.69
PDLIM1P1-201ENST00000604187 SCAF1Q9H7N4 1312 aaKnown RBP19.36■□□□□ 0.69
PDLIM1P1-201ENST00000604187 GGT6Q6P531 493 aa19.36■□□□□ 0.69
PDLIM1P1-201ENST00000604187 ATP7AQ04656 1500 aa19.35■□□□□ 0.69
PDLIM1P1-201ENST00000604187 GPATCH8Q9UKJ3 1502 aaKnown RBP19.35■□□□□ 0.69
PDLIM1P1-201ENST00000604187 A2MP01023 1474 aa19.35■□□□□ 0.69
PDLIM1P1-201ENST00000604187 HSPA1LP34931 641 aa19.34■□□□□ 0.69
PDLIM1P1-201ENST00000604187 PLXNC1O60486 1568 aa19.34■□□□□ 0.69
PDLIM1P1-201ENST00000604187 ZNF142P52746 1687 aaPredicted RBP19.33■□□□□ 0.69
PDLIM1P1-201ENST00000604187 PIP4K2BP78356 416 aa19.33■□□□□ 0.68
PDLIM1P1-201ENST00000604187 KIAA1107Q9UPP5 1409 aa19.33■□□□□ 0.68
PDLIM1P1-201ENST00000604187 CDC42BPAQ5VT25 1732 aa19.31■□□□□ 0.68
PDLIM1P1-201ENST00000604187 CLTCQ00610 1675 aaKnown RBP19.31■□□□□ 0.68
PDLIM1P1-201ENST00000604187 FYCO1Q9BQS8 1478 aa19.31■□□□□ 0.68
PDLIM1P1-201ENST00000604187 CFDP1Q9UEE9 299 aaPredicted RBP19.31■□□□□ 0.68
PDLIM1P1-201ENST00000604187 PLEKHH2Q8IVE3 1493 aa19.3■□□□□ 0.68
PDLIM1P1-201ENST00000604187 INO80Q9ULG1 1556 aaPredicted RBP19.3■□□□□ 0.68
PDLIM1P1-201ENST00000604187 SUPT6HQ7KZ85 1726 aaKnown RBP19.3■□□□□ 0.68
PDLIM1P1-201ENST00000604187 A2ML1A8K2U0 1454 aa19.29■□□□□ 0.68
PDLIM1P1-201ENST00000604187 MED1Q15648 1581 aaPredicted RBP19.28■□□□□ 0.68
PDLIM1P1-201ENST00000604187 CCNB3Q8WWL7 1395 aa19.28■□□□□ 0.68
PDLIM1P1-201ENST00000604187 TOM1O60784 492 aa19.27■□□□□ 0.68
PDLIM1P1-201ENST00000604187 CPS1P31327 1500 aa19.24■□□□□ 0.67
PDLIM1P1-201ENST00000604187 SHANK2Q9UPX8 1470 aa19.23■□□□□ 0.67
PDLIM1P1-201ENST00000604187 TNRQ92752 1358 aa19.23■□□□□ 0.67
PDLIM1P1-201ENST00000604187 DNMT1P26358 1616 aaKnown RBP19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms