RNA–Protein interactions for RNA: ENST00000602655.5

PPFIA3-206, Transcript of PTPRF interacting protein alpha 3, humanhuman

TSL 1 (best)

Gene PPFIA3, Length 3,493 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA3-206ENST00000602655 RTL5Q5HYW3 569 aaPredicted RBP21.27■■□□□ 1
PPFIA3-206ENST00000602655 SLC4A1APQ9BWU0 796 aaKnown RBP21.27■□□□□ 0.99
PPFIA3-206ENST00000602655 MAGI3Q5TCQ9 1506 aa21.26■□□□□ 0.99
PPFIA3-206ENST00000602655 MYOM3Q5VTT5 1437 aa21.26■□□□□ 0.99
PPFIA3-206ENST00000602655 SENP3Q9H4L4 574 aaPredicted RBP21.26■□□□□ 0.99
PPFIA3-206ENST00000602655 TSPY4P0CV99 314 aa21.24■□□□□ 0.99
PPFIA3-206ENST00000602655 TSPY10P0CW01 314 aa21.24■□□□□ 0.99
PPFIA3-206ENST00000602655 CYB5RLQ6IPT4 315 aa21.23■□□□□ 0.99
PPFIA3-206ENST00000602655 NUP153P49790 1475 aaKnown RBP21.21■□□□□ 0.99
PPFIA3-206ENST00000602655 FANCIQ9NVI1 1328 aa21.21■□□□□ 0.99
PPFIA3-206ENST00000602655 DDX10Q13206 875 aaKnown RBP21.2■□□□□ 0.98
PPFIA3-206ENST00000602655 OSCARQ8IYS5 282 aa21.2■□□□□ 0.98
PPFIA3-206ENST00000602655 IL27Q8NEV9 243 aa21.18■□□□□ 0.98
PPFIA3-206ENST00000602655 CCDC18Q5T9S5 1454 aa21.17■□□□□ 0.98
PPFIA3-206ENST00000602655 SAMD9Q5K651 1589 aa21.17■□□□□ 0.98
PPFIA3-206ENST00000602655 KDM2AQ9Y2K7 1162 aa21.17■□□□□ 0.98
PPFIA3-206ENST00000602655 TONSLQ96HA7 1378 aa21.16■□□□□ 0.98
PPFIA3-206ENST00000602655 NPM1P06748 294 aaKnown RBP eCLIP21.15■□□□□ 0.98
PPFIA3-206ENST00000602655 KIAA0556O60303 1618 aa21.14■□□□□ 0.98
PPFIA3-206ENST00000602655 MPHOSPH9Q99550 1183 aa21.14■□□□□ 0.97
PPFIA3-206ENST00000602655 NUP160Q12769 1436 aa21.14■□□□□ 0.97
PPFIA3-206ENST00000602655 ERCC6L2Q5T890 1561 aa21.13■□□□□ 0.97
PPFIA3-206ENST00000602655 UGGT2Q9NYU1 1516 aa21.12■□□□□ 0.97
PPFIA3-206ENST00000602655 RGL3Q3MIN7 710 aa21.11■□□□□ 0.97
PPFIA3-206ENST00000602655 ARHGEF11O15085 1522 aa21.11■□□□□ 0.97
PPFIA3-206ENST00000602655 ERICH6BQ5W0A0 696 aa21.1■□□□□ 0.97
PPFIA3-206ENST00000602655 HECW1Q76N89 1606 aa21.09■□□□□ 0.97
PPFIA3-206ENST00000602655 ATP10BO94823 1461 aa21.08■□□□□ 0.96
PPFIA3-206ENST00000602655 NOP58Q9Y2X3 529 aaKnown RBP21.07■□□□□ 0.96
PPFIA3-206ENST00000602655 AFAP1Q8N556 730 aa21.07■□□□□ 0.96
PPFIA3-206ENST00000602655 PKD2Q13563 968 aa21.06■□□□□ 0.96
PPFIA3-206ENST00000602655 MAP3K1Q13233 1512 aa21.06■□□□□ 0.96
PPFIA3-206ENST00000602655 UBE2Q2Q8WVN8 375 aa21.05■□□□□ 0.96
PPFIA3-206ENST00000602655 TROQ12816 1431 aaPredicted RBP21.05■□□□□ 0.96
PPFIA3-206ENST00000602655 EHBP1L1Q8N3D4 1523 aa21.05■□□□□ 0.96
PPFIA3-206ENST00000602655 LRRIQ1Q96JM4 1722 aa21.04■□□□□ 0.96
PPFIA3-206ENST00000602655 NAIPQ13075 1403 aa21.03■□□□□ 0.96
PPFIA3-206ENST00000602655 CFAP43Q8NDM7 1665 aa21.01■□□□□ 0.95
PPFIA3-206ENST00000602655 SUPT6HQ7KZ85 1726 aaKnown RBP21.01■□□□□ 0.95
PPFIA3-206ENST00000602655 RAPGEF6Q8TEU7 1601 aa21■□□□□ 0.95
PPFIA3-206ENST00000602655 UACAQ9BZF9 1416 aa21■□□□□ 0.95
PPFIA3-206ENST00000602655 L3MBTL2Q969R5 705 aa20.99■□□□□ 0.95
PPFIA3-206ENST00000602655 PTPN23Q9H3S7 1636 aa20.98■□□□□ 0.95
PPFIA3-206ENST00000602655 PAK3O75914 559 aaPredicted RBP20.98■□□□□ 0.95
PPFIA3-206ENST00000602655 CHD1O14646 1710 aa20.98■□□□□ 0.95
PPFIA3-206ENST00000602655 SENP3-EIF4A1A0A087X0R7 540 aa20.97■□□□□ 0.95
PPFIA3-206ENST00000602655 PPP1R15AO75807 674 aaPredicted RBP20.97■□□□□ 0.95
PPFIA3-206ENST00000602655 NUP155O75694 1391 aa20.97■□□□□ 0.95
PPFIA3-206ENST00000602655 ANP32CO43423 234 aa20.96■□□□□ 0.95
PPFIA3-206ENST00000602655 ABCC5O15440 1437 aa20.96■□□□□ 0.95
PPFIA3-206ENST00000602655 PLPPR3Q6T4P5 718 aa20.95■□□□□ 0.94
PPFIA3-206ENST00000602655 GPATCH8Q9UKJ3 1502 aaKnown RBP20.93■□□□□ 0.94
PPFIA3-206ENST00000602655 KIF14Q15058 1648 aa20.93■□□□□ 0.94
PPFIA3-206ENST00000602655 HNRNPUQ00839 825 aaKnown RBP eCLIP20.93■□□□□ 0.94
PPFIA3-206ENST00000602655 DAPK1P53355 1430 aa20.92■□□□□ 0.94
PPFIA3-206ENST00000602655 HFM1A2PYH4 1435 aa20.92■□□□□ 0.94
PPFIA3-206ENST00000602655 EFCAB2Q5VUJ9 269 aa20.91■□□□□ 0.94
PPFIA3-206ENST00000602655 B4GALNT3Q6L9W6 998 aa20.91■□□□□ 0.94
PPFIA3-206ENST00000602655 MAPKBP1O60336 1514 aa20.9■□□□□ 0.94
PPFIA3-206ENST00000602655 CHGAP10645 457 aaKnown RBP20.89■□□□□ 0.93
PPFIA3-206ENST00000602655 ZBTB47Q9UFB7 747 aaPredicted RBP20.89■□□□□ 0.93
PPFIA3-206ENST00000602655 ANP32AP39687 249 aaKnown RBP20.88■□□□□ 0.93
PPFIA3-206ENST00000602655 ANKRD30AQ9BXX3 1397 aa20.87■□□□□ 0.93
PPFIA3-206ENST00000602655 CAMSAP2Q08AD1 1489 aa20.87■□□□□ 0.93
PPFIA3-206ENST00000602655 GGT6Q6P531 493 aa20.85■□□□□ 0.93
PPFIA3-206ENST00000602655 DCAF11Q8TEB1 546 aa20.85■□□□□ 0.93
PPFIA3-206ENST00000602655 MIA2Q96PC5 1412 aa20.84■□□□□ 0.93
PPFIA3-206ENST00000602655 KIF15Q9NS87 1388 aa20.84■□□□□ 0.93
PPFIA3-206ENST00000602655 KDM6BO15054 1643 aa20.83■□□□□ 0.93
PPFIA3-206ENST00000602655 ARHGAP5Q13017 1502 aa20.83■□□□□ 0.92
PPFIA3-206ENST00000602655 KIF3BO15066 747 aa20.82■□□□□ 0.92
PPFIA3-206ENST00000602655 RAPGEF3O95398 923 aa20.82■□□□□ 0.92
PPFIA3-206ENST00000602655 NPM2Q86SE8 214 aaKnown RBP20.81■□□□□ 0.92
PPFIA3-206ENST00000602655 ANKRD50Q9ULJ7 1429 aa20.8■□□□□ 0.92
PPFIA3-206ENST00000602655 HSPA5P11021 654 aaKnown RBP20.8■□□□□ 0.92
PPFIA3-206ENST00000602655 SPAG9O60271 1321 aaKnown RBP20.8■□□□□ 0.92
PPFIA3-206ENST00000602655 NBPF8Q3BBV2 869 aa20.79■□□□□ 0.92
PPFIA3-206ENST00000602655 PKNOX2Q96KN3 472 aa20.79■□□□□ 0.92
PPFIA3-206ENST00000602655 MLECQ14165 292 aa20.78■□□□□ 0.92
PPFIA3-206ENST00000602655 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.78■□□□□ 0.92
PPFIA3-206ENST00000602655 PPP4R2Q9NY27 417 aa20.78■□□□□ 0.92
PPFIA3-206ENST00000602655 C9orf84Q5VXU9 1444 aa20.78■□□□□ 0.92
PPFIA3-206ENST00000602655 NCOA1Q15788 1441 aa20.77■□□□□ 0.92
PPFIA3-206ENST00000602655 LAS1LQ9Y4W2 734 aaKnown RBP20.77■□□□□ 0.92
PPFIA3-206ENST00000602655 TIMELESSQ9UNS1 1208 aa20.76■□□□□ 0.91
PPFIA3-206ENST00000602655 NUTM2DQ5VT03 806 aaPredicted RBP20.75■□□□□ 0.91
PPFIA3-206ENST00000602655 NEFMP07197 916 aa20.72■□□□□ 0.91
PPFIA3-206ENST00000602655 FAM69CQ0P6D2 419 aa20.72■□□□□ 0.91
PPFIA3-206ENST00000602655 ABCA8O94911 1581 aa20.72■□□□□ 0.91
PPFIA3-206ENST00000602655 EIF4G2P78344 907 aaKnown RBP eCLIP20.72■□□□□ 0.914e-8■■■■■ 37.9
PPFIA3-206ENST00000602655 SCAPERQ9BY12 1400 aa20.7■□□□□ 0.9
PPFIA3-206ENST00000602655 AKNAQ7Z591 1439 aa20.69■□□□□ 0.9
PPFIA3-206ENST00000602655 IPO9Q96P70 1041 aaKnown RBP20.66■□□□□ 0.9
PPFIA3-206ENST00000602655 TCOF1Q13428 1488 aaKnown RBP20.66■□□□□ 0.9
PPFIA3-206ENST00000602655 CARD11Q9BXL7 1154 aa20.66■□□□□ 0.9
PPFIA3-206ENST00000602655 BRPF3Q9ULD4 1205 aa20.65■□□□□ 0.9
PPFIA3-206ENST00000602655 TRAPPC8Q9Y2L5 1435 aa20.65■□□□□ 0.9
PPFIA3-206ENST00000602655 SYCP2Q9BX26 1530 aa20.64■□□□□ 0.89
PPFIA3-206ENST00000602655 C11orf95C9JLR9 678 aaPredicted RBP20.64■□□□□ 0.89
PPFIA3-206ENST00000602655 CCER2I3L3R5 266 aa20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms