RNA–Protein interactions for RNA: ENST00000602303.5

UBE2E3-204, Transcript of ubiquitin conjugating enzyme E2 E3, humanhuman

TSL 5

Gene UBE2E3, Length 654 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2E3-204ENST00000602303 PREX1Q8TCU6 1659 aa11.68□□□□□ -0.54
UBE2E3-204ENST00000602303 FER1L4A9Z1Z3 1794 aa11.67□□□□□ -0.54
UBE2E3-204ENST00000602303 SETD1BQ9UPS6 1966 aaKnown RBP11.67□□□□□ -0.54
UBE2E3-204ENST00000602303 ARID3CA6NKF2 412 aa11.67□□□□□ -0.54
UBE2E3-204ENST00000602303 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.67□□□□□ -0.54
UBE2E3-204ENST00000602303 HNRNPUL2Q1KMD3 747 aaKnown RBP11.67□□□□□ -0.54
UBE2E3-204ENST00000602303 ILDR2Q71H61 639 aa11.67□□□□□ -0.54
UBE2E3-204ENST00000602303 ARHGEF12Q9NZN5 1544 aa11.66□□□□□ -0.54
UBE2E3-204ENST00000602303 IQSEC2Q5JU85 1478 aa11.66□□□□□ -0.54
UBE2E3-204ENST00000602303 PTPRTO14522 1441 aa11.64□□□□□ -0.55
UBE2E3-204ENST00000602303 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.64□□□□□ -0.55
UBE2E3-204ENST00000602303 ATP10AO60312 1499 aa11.63□□□□□ -0.55
UBE2E3-204ENST00000602303 SPATA31D1Q6ZQQ2 1576 aa11.63□□□□□ -0.55
UBE2E3-204ENST00000602303 C9orf84Q5VXU9 1444 aa11.63□□□□□ -0.55
UBE2E3-204ENST00000602303 P3H3Q8IVL6 736 aa11.63□□□□□ -0.55
UBE2E3-204ENST00000602303 HECW1Q76N89 1606 aa11.63□□□□□ -0.55
UBE2E3-204ENST00000602303 UHRF1BP1Q6BDS2 1440 aa11.62□□□□□ -0.55
UBE2E3-204ENST00000602303 STRCQ7RTU9 1775 aa11.62□□□□□ -0.55
UBE2E3-204ENST00000602303 PLCH2O75038 1416 aa11.61□□□□□ -0.55
UBE2E3-204ENST00000602303 SIGLEC1Q9BZZ2 1709 aa11.61□□□□□ -0.55
UBE2E3-204ENST00000602303 SCAPERQ9BY12 1400 aa11.6□□□□□ -0.55
UBE2E3-204ENST00000602303 MLECQ14165 292 aa11.58□□□□□ -0.56
UBE2E3-204ENST00000602303 REREQ9P2R6 1566 aa11.58□□□□□ -0.56
UBE2E3-204ENST00000602303 ZNF518AQ6AHZ1 1483 aa11.57□□□□□ -0.56
UBE2E3-204ENST00000602303 EFCAB2Q5VUJ9 269 aa11.56□□□□□ -0.56
UBE2E3-204ENST00000602303 CSRNP3Q8WYN3 585 aa11.56□□□□□ -0.56
UBE2E3-204ENST00000602303 LTBP4Q8N2S1 1624 aa11.55□□□□□ -0.56
UBE2E3-204ENST00000602303 KDM5CP41229 1560 aa11.54□□□□□ -0.56
UBE2E3-204ENST00000602303 EEA1Q15075 1411 aa11.54□□□□□ -0.56
UBE2E3-204ENST00000602303 TRAPPC8Q9Y2L5 1435 aa11.53□□□□□ -0.56
UBE2E3-204ENST00000602303 AGLP35573 1532 aa11.53□□□□□ -0.56
UBE2E3-204ENST00000602303 MYO5CQ9NQX4 1742 aa11.52□□□□□ -0.56
UBE2E3-204ENST00000602303 CEBPAP49715 358 aaPredicted RBP11.52□□□□□ -0.57
UBE2E3-204ENST00000602303 CDK11AQ9UQ88 783 aaPredicted RBP11.52□□□□□ -0.57
UBE2E3-204ENST00000602303 CNTLNQ9NXG0 1405 aa11.52□□□□□ -0.57
UBE2E3-204ENST00000602303 NCOA1Q15788 1441 aa11.51□□□□□ -0.57
UBE2E3-204ENST00000602303 MLH3Q9UHC1 1453 aa11.51□□□□□ -0.57
UBE2E3-204ENST00000602303 NPATQ14207 1427 aa11.5□□□□□ -0.57
UBE2E3-204ENST00000602303 C3P01024 1663 aa11.49□□□□□ -0.57
UBE2E3-204ENST00000602303 ESF1Q9H501 851 aaKnown RBP11.49□□□□□ -0.57
UBE2E3-204ENST00000602303 DIP2CQ9Y2E4 1556 aa11.48□□□□□ -0.57
UBE2E3-204ENST00000602303 FMN1Q68DA7 1419 aa11.47□□□□□ -0.57
UBE2E3-204ENST00000602303 KIF14Q15058 1648 aa11.46□□□□□ -0.57
UBE2E3-204ENST00000602303 CDK13Q14004 1512 aaKnown RBP11.46□□□□□ -0.57
UBE2E3-204ENST00000602303 CLIP1P30622 1438 aa11.45□□□□□ -0.58
UBE2E3-204ENST00000602303 AFAP1Q8N556 730 aa11.45□□□□□ -0.58
UBE2E3-204ENST00000602303 MROH2AA6NES4 1674 aa11.45□□□□□ -0.58
UBE2E3-204ENST00000602303 ARHGAP5Q13017 1502 aa11.45□□□□□ -0.58
UBE2E3-204ENST00000602303 PLA2R1Q13018 1463 aa11.44□□□□□ -0.58
UBE2E3-204ENST00000602303 TROQ12816 1431 aaPredicted RBP11.44□□□□□ -0.58
UBE2E3-204ENST00000602303 PKD2Q13563 968 aa11.44□□□□□ -0.58
UBE2E3-204ENST00000602303 ABCA6Q8N139 1617 aa11.43□□□□□ -0.58
UBE2E3-204ENST00000602303 CAMSAP1Q5T5Y3 1602 aa11.42□□□□□ -0.58
UBE2E3-204ENST00000602303 UBAP1LF5GYI3 381 aa11.41□□□□□ -0.58
UBE2E3-204ENST00000602303 MYT1LQ9UL68 1186 aa11.41□□□□□ -0.58
UBE2E3-204ENST00000602303 ABCC1P33527 1531 aa11.4□□□□□ -0.59
UBE2E3-204ENST00000602303 ZNF142P52746 1687 aaPredicted RBP11.4□□□□□ -0.59
UBE2E3-204ENST00000602303 TCOF1Q13428 1488 aaKnown RBP11.39□□□□□ -0.59
UBE2E3-204ENST00000602303 RANGAP1P46060 587 aaPredicted RBP11.39□□□□□ -0.59
UBE2E3-204ENST00000602303 ZMYM3Q14202 1370 aa11.39□□□□□ -0.59
UBE2E3-204ENST00000602303 CDC42BPBQ9Y5S2 1711 aa11.38□□□□□ -0.59
UBE2E3-204ENST00000602303 KIDINS220Q9ULH0 1771 aa11.38□□□□□ -0.59
UBE2E3-204ENST00000602303 PREX2Q70Z35 1606 aa11.38□□□□□ -0.59
UBE2E3-204ENST00000602303 ITSN2Q9NZM3 1697 aa11.36□□□□□ -0.59
UBE2E3-204ENST00000602303 ZNF335Q9H4Z2 1342 aaPredicted RBP11.36□□□□□ -0.59
UBE2E3-204ENST00000602303 SCAF1Q9H7N4 1312 aaKnown RBP11.35□□□□□ -0.59
UBE2E3-204ENST00000602303 TOM1O60784 492 aa11.35□□□□□ -0.59
UBE2E3-204ENST00000602303 MED1Q15648 1581 aaPredicted RBP11.35□□□□□ -0.59
UBE2E3-204ENST00000602303 CEP170BQ9Y4F5 1589 aaPredicted RBP11.35□□□□□ -0.59
UBE2E3-204ENST00000602303 MYO3AQ8NEV4 1616 aa11.35□□□□□ -0.59
UBE2E3-204ENST00000602303 CPS1P31327 1500 aa11.35□□□□□ -0.59
UBE2E3-204ENST00000602303 NCKAP5LQ9HCH0 1330 aa11.34□□□□□ -0.59
UBE2E3-204ENST00000602303 CCDC18Q5T9S5 1454 aa11.33□□□□□ -0.6
UBE2E3-204ENST00000602303 ATP1B4Q9UN42 357 aaPredicted RBP11.33□□□□□ -0.6
UBE2E3-204ENST00000602303 PTPRKQ15262 1439 aa11.33□□□□□ -0.6
UBE2E3-204ENST00000602303 ARHGAP35Q9NRY4 1499 aa11.32□□□□□ -0.6
UBE2E3-204ENST00000602303 PLXNC1O60486 1568 aa11.32□□□□□ -0.6
UBE2E3-204ENST00000602303 SAMD9LQ8IVG5 1584 aa11.32□□□□□ -0.6
UBE2E3-204ENST00000602303 SUPT6HQ7KZ85 1726 aaKnown RBP11.32□□□□□ -0.6
UBE2E3-204ENST00000602303 KIAA1107Q9UPP5 1409 aa11.31□□□□□ -0.6
UBE2E3-204ENST00000602303 A2ML1A8K2U0 1454 aa11.31□□□□□ -0.6
UBE2E3-204ENST00000602303 PLEKHH2Q8IVE3 1493 aa11.31□□□□□ -0.6
UBE2E3-204ENST00000602303 HSPA1LP34931 641 aa11.3□□□□□ -0.6
UBE2E3-204ENST00000602303 MAPK8IP2Q13387 824 aaPredicted RBP11.3□□□□□ -0.6
UBE2E3-204ENST00000602303 SPAG9O60271 1321 aaKnown RBP11.3□□□□□ -0.6
UBE2E3-204ENST00000602303 FAM135AQ9P2D6 1515 aa11.29□□□□□ -0.6
UBE2E3-204ENST00000602303 CDC42BPAQ5VT25 1732 aa11.29□□□□□ -0.6
UBE2E3-204ENST00000602303 CLTCQ00610 1675 aaKnown RBP11.28□□□□□ -0.6
UBE2E3-204ENST00000602303 A2MP01023 1474 aa11.28□□□□□ -0.6
UBE2E3-204ENST00000602303 ATP7AQ04656 1500 aa11.28□□□□□ -0.6
UBE2E3-204ENST00000602303 CASKIN1Q8WXD9 1431 aa11.27□□□□□ -0.6
UBE2E3-204ENST00000602303 SHANK2Q9UPX8 1470 aa11.27□□□□□ -0.6
UBE2E3-204ENST00000602303 LRRIQ1Q96JM4 1722 aa11.27□□□□□ -0.61
UBE2E3-204ENST00000602303 INO80Q9ULG1 1556 aaPredicted RBP11.27□□□□□ -0.61
UBE2E3-204ENST00000602303 DNMT1P26358 1616 aaKnown RBP11.27□□□□□ -0.61
UBE2E3-204ENST00000602303 UBTFP17480 764 aaKnown RBP11.26□□□□□ -0.61
UBE2E3-204ENST00000602303 POLR1AO95602 1720 aaPredicted RBP11.26□□□□□ -0.61
UBE2E3-204ENST00000602303 SYCP2Q9BX26 1530 aa11.25□□□□□ -0.61
UBE2E3-204ENST00000602303 ADGBQ8N7X0 1667 aa11.24□□□□□ -0.61
UBE2E3-204ENST00000602303 MED14O60244 1454 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms