RNA–Protein interactions for RNA: ENST00000600387.5

ARHGEF1-221, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 3

Gene ARHGEF1, Length 2,272 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-221ENST00000600387 GAPVD1Q14C86 1478 aa25.39■■□□□ 1.66
ARHGEF1-221ENST00000600387 SPATA31E1Q6ZUB1 1445 aa25.39■■□□□ 1.65
ARHGEF1-221ENST00000600387 SMG6Q86US8 1419 aaKnown RBP25.39■■□□□ 1.65
ARHGEF1-221ENST00000600387 TEX14Q8IWB6 1497 aa25.39■■□□□ 1.65
ARHGEF1-221ENST00000600387 NOP58Q9Y2X3 529 aaKnown RBP25.38■■□□□ 1.65
ARHGEF1-221ENST00000600387 ANKRD30BQ9BXX2 1392 aa25.37■■□□□ 1.65
ARHGEF1-221ENST00000600387 KIF7Q2M1P5 1343 aa25.36■■□□□ 1.65
ARHGEF1-221ENST00000600387 LAMC3Q9Y6N6 1575 aa25.36■■□□□ 1.65
ARHGEF1-221ENST00000600387 DEKP35659 375 aaKnown RBP25.36■■□□□ 1.65
ARHGEF1-221ENST00000600387 NESP48681 1621 aa25.35■■□□□ 1.65
ARHGEF1-221ENST00000600387 URB2Q14146 1524 aaKnown RBP25.34■■□□□ 1.65
ARHGEF1-221ENST00000600387 EPRSP07814 1512 aaKnown RBP25.34■■□□□ 1.65
ARHGEF1-221ENST00000600387 NBPF8Q3BBV2 869 aa25.33■■□□□ 1.65
ARHGEF1-221ENST00000600387 ROCK1Q13464 1354 aa25.33■■□□□ 1.65
ARHGEF1-221ENST00000600387 TDRD9Q8NDG6 1382 aaKnown RBP25.32■■□□□ 1.64
ARHGEF1-221ENST00000600387 RNF123Q5XPI4 1314 aa25.3■■□□□ 1.64
ARHGEF1-221ENST00000600387 FOXD1Q16676 465 aa25.29■■□□□ 1.64
ARHGEF1-221ENST00000600387 NUDCQ9Y266 331 aa25.28■■□□□ 1.64
ARHGEF1-221ENST00000600387 DNMT1P26358 1616 aaKnown RBP25.26■■□□□ 1.63
ARHGEF1-221ENST00000600387 DAPK1P53355 1430 aa25.25■■□□□ 1.63
ARHGEF1-221ENST00000600387 DHX29Q7Z478 1369 aaKnown RBP25.23■■□□□ 1.63
ARHGEF1-221ENST00000600387 WDR62O43379 1518 aa25.23■■□□□ 1.63
ARHGEF1-221ENST00000600387 CDK13Q14004 1512 aaKnown RBP25.22■■□□□ 1.63
ARHGEF1-221ENST00000600387 CCDC136Q96JN2 1154 aa25.22■■□□□ 1.63
ARHGEF1-221ENST00000600387 IQGAP2Q13576 1575 aa25.22■■□□□ 1.63
ARHGEF1-221ENST00000600387 ANP32AP39687 249 aaKnown RBP25.21■■□□□ 1.63
ARHGEF1-221ENST00000600387 PAK3O75914 559 aaPredicted RBP25.2■■□□□ 1.62
ARHGEF1-221ENST00000600387 IPO9Q96P70 1041 aaKnown RBP25.19■■□□□ 1.62
ARHGEF1-221ENST00000600387 ARID4BQ4LE39 1312 aaPredicted RBP25.18■■□□□ 1.62
ARHGEF1-221ENST00000600387 SLC4A1APQ9BWU0 796 aaKnown RBP25.17■■□□□ 1.62
ARHGEF1-221ENST00000600387 ABCC5O15440 1437 aa25.17■■□□□ 1.62
ARHGEF1-221ENST00000600387 BCORL1Q5H9F3 1711 aa25.16■■□□□ 1.62
ARHGEF1-221ENST00000600387 MBD5Q9P267 1494 aa25.16■■□□□ 1.62
ARHGEF1-221ENST00000600387 NBR1Q14596 966 aa25.15■■□□□ 1.62
ARHGEF1-221ENST00000600387 PBRM1Q86U86 1689 aa25.14■■□□□ 1.62
ARHGEF1-221ENST00000600387 KIF14Q15058 1648 aa25.14■■□□□ 1.61
ARHGEF1-221ENST00000600387 TARBP1Q13395 1621 aaKnown RBP25.12■■□□□ 1.61
ARHGEF1-221ENST00000600387 USP47Q96K76 1375 aa25.11■■□□□ 1.61
ARHGEF1-221ENST00000600387 KDM5CP41229 1560 aa25.1■■□□□ 1.61
ARHGEF1-221ENST00000600387 ZBTB47Q9UFB7 747 aaPredicted RBP25.1■■□□□ 1.61
ARHGEF1-221ENST00000600387 PZPP20742 1482 aa25.09■■□□□ 1.61
ARHGEF1-221ENST00000600387 ROCK2O75116 1388 aaKnown RBP25.09■■□□□ 1.61
ARHGEF1-221ENST00000600387 ADGBQ8N7X0 1667 aa25.08■■□□□ 1.6
ARHGEF1-221ENST00000600387 RTL5Q5HYW3 569 aaPredicted RBP25.07■■□□□ 1.6
ARHGEF1-221ENST00000600387 PNISRQ8TF01 805 aaKnown RBP25.07■■□□□ 1.6
ARHGEF1-221ENST00000600387 PDS5BQ9NTI5 1447 aa25.06■■□□□ 1.6
ARHGEF1-221ENST00000600387 ADAMTS12P58397 1594 aa25.04■■□□□ 1.6
ARHGEF1-221ENST00000600387 KIAA1107Q9UPP5 1409 aa25.03■■□□□ 1.6
ARHGEF1-221ENST00000600387 TMC1Q8TDI8 760 aa25.02■■□□□ 1.6
ARHGEF1-221ENST00000600387 LRPPRCP42704 1394 aaKnown RBP25■■□□□ 1.59
ARHGEF1-221ENST00000600387 KTN1Q86UP2 1357 aaKnown RBP25■■□□□ 1.59
ARHGEF1-221ENST00000600387 POLR3GLQ9BT43 218 aa24.99■■□□□ 1.59
ARHGEF1-221ENST00000600387 KIF15Q9NS87 1388 aa24.99■■□□□ 1.59
ARHGEF1-221ENST00000600387 ZNF644Q9H582 1327 aaPredicted RBP24.98■■□□□ 1.59
ARHGEF1-221ENST00000600387 ITSN2Q9NZM3 1697 aa24.98■■□□□ 1.59
ARHGEF1-221ENST00000600387 UHRF1BP1Q6BDS2 1440 aa24.98■■□□□ 1.59
ARHGEF1-221ENST00000600387 RALGAPBQ86X10 1494 aa24.97■■□□□ 1.59
ARHGEF1-221ENST00000600387 ARID3CA6NKF2 412 aa24.97■■□□□ 1.59
ARHGEF1-221ENST00000600387 BRD4O60885 1362 aaPredicted RBP24.96■■□□□ 1.59
ARHGEF1-221ENST00000600387 CNGB1Q14028 1251 aaPredicted RBP24.96■■□□□ 1.59
ARHGEF1-221ENST00000600387 CROCC2H7BZ55 1655 aa24.96■■□□□ 1.59
ARHGEF1-221ENST00000600387 ADGRL2O95490 1459 aa24.95■■□□□ 1.58
ARHGEF1-221ENST00000600387 RAPGEF6Q8TEU7 1601 aa24.95■■□□□ 1.58
ARHGEF1-221ENST00000600387 TCERG1O14776 1098 aaKnown RBP24.94■■□□□ 1.58
ARHGEF1-221ENST00000600387 CAMSAP2Q08AD1 1489 aa24.94■■□□□ 1.58
ARHGEF1-221ENST00000600387 KIAA0556O60303 1618 aa24.93■■□□□ 1.58
ARHGEF1-221ENST00000600387 NUP153P49790 1475 aaKnown RBP24.93■■□□□ 1.58
ARHGEF1-221ENST00000600387 RRP1P56182 461 aaKnown RBP24.92■■□□□ 1.58
ARHGEF1-221ENST00000600387 ZNF326Q5BKZ1 582 aaKnown RBP24.92■■□□□ 1.58
ARHGEF1-221ENST00000600387 MYBBP1AQ9BQG0 1328 aaKnown RBP24.92■■□□□ 1.58
ARHGEF1-221ENST00000600387 RALBP1Q15311 655 aa24.91■■□□□ 1.58
ARHGEF1-221ENST00000600387 E9PCH4 1651 aa24.91■■□□□ 1.58
ARHGEF1-221ENST00000600387 ARHGEF12Q9NZN5 1544 aa24.91■■□□□ 1.58
ARHGEF1-221ENST00000600387 PKD2Q13563 968 aa24.88■■□□□ 1.57
ARHGEF1-221ENST00000600387 DISP1Q96F81 1524 aa24.86■■□□□ 1.57
ARHGEF1-221ENST00000600387 MS4A1P11836 297 aa24.86■■□□□ 1.57
ARHGEF1-221ENST00000600387 USP35Q9P2H5 1018 aa24.85■■□□□ 1.57
ARHGEF1-221ENST00000600387 TROQ12816 1431 aaPredicted RBP24.85■■□□□ 1.57
ARHGEF1-221ENST00000600387 PDE3BQ13370 1112 aa24.84■■□□□ 1.57
ARHGEF1-221ENST00000600387 CARD11Q9BXL7 1154 aa24.84■■□□□ 1.57
ARHGEF1-221ENST00000600387 RCAN3Q9UKA8 241 aa24.84■■□□□ 1.57
ARHGEF1-221ENST00000600387 ANKRD30AQ9BXX3 1397 aa24.84■■□□□ 1.57
ARHGEF1-221ENST00000600387 ADCY10Q96PN6 1610 aa24.84■■□□□ 1.57
ARHGEF1-221ENST00000600387 EXOC6Q8TAG9 804 aa24.83■■□□□ 1.57
ARHGEF1-221ENST00000600387 CFDP1Q9UEE9 299 aaPredicted RBP24.83■■□□□ 1.57
ARHGEF1-221ENST00000600387 KIAA0586Q9BVV6 1533 aa24.83■■□□□ 1.57
ARHGEF1-221ENST00000600387 PDE4AP27815 886 aa24.82■■□□□ 1.56
ARHGEF1-221ENST00000600387 GPATCH8Q9UKJ3 1502 aaKnown RBP24.81■■□□□ 1.56
ARHGEF1-221ENST00000600387 SENP3-EIF4A1A0A087X0R7 540 aa24.81■■□□□ 1.56
ARHGEF1-221ENST00000600387 BACH2Q9BYV9 841 aa24.8■■□□□ 1.56
ARHGEF1-221ENST00000600387 ANKRD50Q9ULJ7 1429 aa24.79■■□□□ 1.56
ARHGEF1-221ENST00000600387 NPM2Q86SE8 214 aaKnown RBP24.78■■□□□ 1.56
ARHGEF1-221ENST00000600387 PRG4Q92954 1404 aaPredicted RBP24.77■■□□□ 1.56
ARHGEF1-221ENST00000600387 KDM5DQ9BY66 1539 aa24.76■■□□□ 1.55
ARHGEF1-221ENST00000600387 ST20-MTHFSA0A0A6YYL1 179 aa24.75■■□□□ 1.55
ARHGEF1-221ENST00000600387 NLRP13Q86W25 1043 aa24.75■■□□□ 1.55
ARHGEF1-221ENST00000600387 CEP170Q5SW79 1584 aa24.74■■□□□ 1.55
ARHGEF1-221ENST00000600387 PPM1GO15355 546 aaPredicted RBP24.74■■□□□ 1.55
ARHGEF1-221ENST00000600387 PARD3Q8TEW0 1356 aa24.73■■□□□ 1.55
ARHGEF1-221ENST00000600387 NEFMP07197 916 aa24.72■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms