RNA–Protein interactions for RNA: ENST00000600077.5

HOMER3-212, Transcript of homer scaffold protein 3, humanhuman

TSL 3

Gene HOMER3, Length 675 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-212ENST00000600077 PTPRTO14522 1441 aa23.57■■□□□ 1.36
HOMER3-212ENST00000600077 ARHGEF12Q9NZN5 1544 aa23.56■■□□□ 1.36
HOMER3-212ENST00000600077 UHRF1BP1Q6BDS2 1440 aa23.56■■□□□ 1.36
HOMER3-212ENST00000600077 IQSEC2Q5JU85 1478 aa23.56■■□□□ 1.36
HOMER3-212ENST00000600077 HECW1Q76N89 1606 aa23.53■■□□□ 1.36
HOMER3-212ENST00000600077 CEBPAP49715 358 aaPredicted RBP23.53■■□□□ 1.36
HOMER3-212ENST00000600077 NUP153P49790 1475 aaKnown RBP23.53■■□□□ 1.36
HOMER3-212ENST00000600077 ATP10AO60312 1499 aa23.52■■□□□ 1.36
HOMER3-212ENST00000600077 SETD1BQ9UPS6 1966 aaKnown RBP23.51■■□□□ 1.35
HOMER3-212ENST00000600077 SAMD9Q5K651 1589 aa23.51■■□□□ 1.35
HOMER3-212ENST00000600077 C9orf84Q5VXU9 1444 aa23.5■■□□□ 1.35
HOMER3-212ENST00000600077 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.49■■□□□ 1.35
HOMER3-212ENST00000600077 SCAPERQ9BY12 1400 aa23.47■■□□□ 1.35
HOMER3-212ENST00000600077 LTBP4Q8N2S1 1624 aa23.45■■□□□ 1.34
HOMER3-212ENST00000600077 PLCH2O75038 1416 aa23.39■■□□□ 1.33
HOMER3-212ENST00000600077 EFCAB2Q5VUJ9 269 aa23.34■■□□□ 1.33
HOMER3-212ENST00000600077 ESF1Q9H501 851 aaKnown RBP23.33■■□□□ 1.33
HOMER3-212ENST00000600077 TRAPPC8Q9Y2L5 1435 aa23.33■■□□□ 1.32
HOMER3-212ENST00000600077 UBAP1LF5GYI3 381 aa23.32■■□□□ 1.32
HOMER3-212ENST00000600077 NCOA1Q15788 1441 aa23.32■■□□□ 1.32
HOMER3-212ENST00000600077 ZNF518AQ6AHZ1 1483 aa23.3■■□□□ 1.32
HOMER3-212ENST00000600077 C3P01024 1663 aa23.28■■□□□ 1.32
HOMER3-212ENST00000600077 MYT1LQ9UL68 1186 aa23.27■■□□□ 1.32
HOMER3-212ENST00000600077 RANGAP1P46060 587 aaPredicted RBP23.25■■□□□ 1.31
HOMER3-212ENST00000600077 REREQ9P2R6 1566 aa23.25■■□□□ 1.31
HOMER3-212ENST00000600077 CSRNP3Q8WYN3 585 aa23.23■■□□□ 1.31
HOMER3-212ENST00000600077 AFAP1Q8N556 730 aa23.22■■□□□ 1.31
HOMER3-212ENST00000600077 KDM5CP41229 1560 aa23.22■■□□□ 1.31
HOMER3-212ENST00000600077 CNTLNQ9NXG0 1405 aa23.21■■□□□ 1.31
HOMER3-212ENST00000600077 AGLP35573 1532 aa23.21■■□□□ 1.31
HOMER3-212ENST00000600077 MYO5CQ9NQX4 1742 aa23.21■■□□□ 1.31
HOMER3-212ENST00000600077 CAMSAP1Q5T5Y3 1602 aa23.19■■□□□ 1.3
HOMER3-212ENST00000600077 DIP2CQ9Y2E4 1556 aa23.19■■□□□ 1.3
HOMER3-212ENST00000600077 ZNF335Q9H4Z2 1342 aaPredicted RBP23.19■■□□□ 1.3
HOMER3-212ENST00000600077 CDK13Q14004 1512 aaKnown RBP23.18■■□□□ 1.3
HOMER3-212ENST00000600077 CDK11AQ9UQ88 783 aaPredicted RBP23.17■■□□□ 1.3
HOMER3-212ENST00000600077 MLH3Q9UHC1 1453 aa23.16■■□□□ 1.3
HOMER3-212ENST00000600077 NPATQ14207 1427 aa23.16■■□□□ 1.3
HOMER3-212ENST00000600077 PKD2Q13563 968 aa23.15■■□□□ 1.3
HOMER3-212ENST00000600077 MED1Q15648 1581 aaPredicted RBP23.14■■□□□ 1.3
HOMER3-212ENST00000600077 NCKAP5LQ9HCH0 1330 aa23.14■■□□□ 1.3
HOMER3-212ENST00000600077 ARHGAP5Q13017 1502 aa23.12■■□□□ 1.29
HOMER3-212ENST00000600077 HSPA1LP34931 641 aa23.1■■□□□ 1.29
HOMER3-212ENST00000600077 ABCA6Q8N139 1617 aa23.1■■□□□ 1.29
HOMER3-212ENST00000600077 PLA2R1Q13018 1463 aa23.09■■□□□ 1.29
HOMER3-212ENST00000600077 SCAF1Q9H7N4 1312 aaKnown RBP23.08■■□□□ 1.28
HOMER3-212ENST00000600077 TOM1O60784 492 aa23.07■■□□□ 1.28
HOMER3-212ENST00000600077 PHF23Q9BUL5 403 aaPredicted RBP23.07■■□□□ 1.28
HOMER3-212ENST00000600077 KIF14Q15058 1648 aa23.06■■□□□ 1.28
HOMER3-212ENST00000600077 ZMYM3Q14202 1370 aa23.05■■□□□ 1.28
HOMER3-212ENST00000600077 ATP1B4Q9UN42 357 aaPredicted RBP23.05■■□□□ 1.28
HOMER3-212ENST00000600077 MROH2AA6NES4 1674 aa23.05■■□□□ 1.28
HOMER3-212ENST00000600077 PPP6R1Q9UPN7 881 aa23.04■■□□□ 1.28
HOMER3-212ENST00000600077 PIP4K2BP78356 416 aa23.03■■□□□ 1.28
HOMER3-212ENST00000600077 CLIP1P30622 1438 aa23.02■■□□□ 1.28
HOMER3-212ENST00000600077 TCOF1Q13428 1488 aaKnown RBP23.02■■□□□ 1.28
HOMER3-212ENST00000600077 TROQ12816 1431 aaPredicted RBP23.01■■□□□ 1.27
HOMER3-212ENST00000600077 FMN1Q68DA7 1419 aa22.99■■□□□ 1.27
HOMER3-212ENST00000600077 EEA1Q15075 1411 aa22.99■■□□□ 1.27
HOMER3-212ENST00000600077 ZNF142P52746 1687 aaPredicted RBP22.98■■□□□ 1.27
HOMER3-212ENST00000600077 SUPT6HQ7KZ85 1726 aaKnown RBP22.96■■□□□ 1.27
HOMER3-212ENST00000600077 CPS1P31327 1500 aa22.95■■□□□ 1.26
HOMER3-212ENST00000600077 ABCC1P33527 1531 aa22.95■■□□□ 1.26
HOMER3-212ENST00000600077 CEP170BQ9Y4F5 1589 aaPredicted RBP22.95■■□□□ 1.26
HOMER3-212ENST00000600077 KIDINS220Q9ULH0 1771 aa22.94■■□□□ 1.26
HOMER3-212ENST00000600077 MYO3AQ8NEV4 1616 aa22.94■■□□□ 1.26
HOMER3-212ENST00000600077 CDC42BPBQ9Y5S2 1711 aa22.94■■□□□ 1.26
HOMER3-212ENST00000600077 ITSN2Q9NZM3 1697 aa22.91■■□□□ 1.26
HOMER3-212ENST00000600077 PTPRKQ15262 1439 aa22.9■■□□□ 1.26
HOMER3-212ENST00000600077 PREX2Q70Z35 1606 aa22.88■■□□□ 1.25
HOMER3-212ENST00000600077 SHANK2Q9UPX8 1470 aa22.86■■□□□ 1.25
HOMER3-212ENST00000600077 CLTCQ00610 1675 aaKnown RBP22.86■■□□□ 1.25
HOMER3-212ENST00000600077 A2ML1A8K2U0 1454 aa22.84■■□□□ 1.25
HOMER3-212ENST00000600077 SPAG9O60271 1321 aaKnown RBP22.83■■□□□ 1.25
HOMER3-212ENST00000600077 SAMD9LQ8IVG5 1584 aa22.82■■□□□ 1.24
HOMER3-212ENST00000600077 DNMT1P26358 1616 aaKnown RBP22.79■■□□□ 1.24
HOMER3-212ENST00000600077 GGT6Q6P531 493 aa22.79■■□□□ 1.24
HOMER3-212ENST00000600077 A2MP01023 1474 aa22.77■■□□□ 1.24
HOMER3-212ENST00000600077 POLR1AO95602 1720 aaPredicted RBP22.77■■□□□ 1.23
HOMER3-212ENST00000600077 ARHGAP35Q9NRY4 1499 aa22.76■■□□□ 1.23
HOMER3-212ENST00000600077 ANKLE2Q86XL3 938 aa22.75■■□□□ 1.23
HOMER3-212ENST00000600077 ZNF777Q9ULD5 760 aaPredicted RBP22.75■■□□□ 1.23
HOMER3-212ENST00000600077 PLXNC1O60486 1568 aa22.75■■□□□ 1.23
HOMER3-212ENST00000600077 ATP7AQ04656 1500 aa22.73■■□□□ 1.23
HOMER3-212ENST00000600077 NEURL4Q96JN8 1562 aa22.73■■□□□ 1.23
HOMER3-212ENST00000600077 CDC42BPAQ5VT25 1732 aa22.72■■□□□ 1.23
HOMER3-212ENST00000600077 UBTFP17480 764 aaKnown RBP22.72■■□□□ 1.23
HOMER3-212ENST00000600077 ALKQ9UM73 1620 aa22.71■■□□□ 1.23
HOMER3-212ENST00000600077 HNRNPMP52272 730 aaKnown RBP eCLIP22.71■■□□□ 1.23
HOMER3-212ENST00000600077 LRRIQ1Q96JM4 1722 aa22.71■■□□□ 1.23
HOMER3-212ENST00000600077 RGS17Q9UGC6 210 aaPredicted RBP22.7■■□□□ 1.22
HOMER3-212ENST00000600077 CCDC18Q5T9S5 1454 aa22.7■■□□□ 1.22
HOMER3-212ENST00000600077 SYCP2Q9BX26 1530 aa22.7■■□□□ 1.22
HOMER3-212ENST00000600077 VWDEQ8N2E2 1590 aa22.7■■□□□ 1.22
HOMER3-212ENST00000600077 THEMISQ8N1K5 641 aaPredicted RBP22.69■■□□□ 1.22
HOMER3-212ENST00000600077 KIAA1107Q9UPP5 1409 aa22.68■■□□□ 1.22
HOMER3-212ENST00000600077 TNRQ92752 1358 aa22.67■■□□□ 1.22
HOMER3-212ENST00000600077 INO80Q9ULG1 1556 aaPredicted RBP22.67■■□□□ 1.22
HOMER3-212ENST00000600077 PLEKHH2Q8IVE3 1493 aa22.66■■□□□ 1.22
HOMER3-212ENST00000600077 SENP3Q9H4L4 574 aaPredicted RBP22.66■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms