RNA–Protein interactions for RNA: ENST00000599343.5

SCN8A-208, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN8A, Length 5,976 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-208ENST00000599343 KIAA2012Q0VF49 1180 aa14.98□□□□□ -0.01
SCN8A-208ENST00000599343 KIAA1211Q6ZU35 1233 aa14.98□□□□□ -0.01
SCN8A-208ENST00000599343 RTF1Q92541 710 aaKnown RBP14.97□□□□□ -0.01
SCN8A-208ENST00000599343 HSPA5P11021 654 aaKnown RBP14.96□□□□□ -0.01
SCN8A-208ENST00000599343 ITPRIPQ8IWB1 547 aa14.96□□□□□ -0.01
SCN8A-208ENST00000599343 NOC3LQ8WTT2 800 aaKnown RBP14.95□□□□□ -0.02
SCN8A-208ENST00000599343 CFAP44Q96MT7 982 aa14.94□□□□□ -0.02
SCN8A-208ENST00000599343 CCER2I3L3R5 266 aa14.94□□□□□ -0.02
SCN8A-208ENST00000599343 MFAP1P55081 439 aaKnown RBP14.94□□□□□ -0.02
SCN8A-208ENST00000599343 RCAN3Q9UKA8 241 aa14.93□□□□□ -0.02
SCN8A-208ENST00000599343 TNIKQ9UKE5 1360 aa14.93□□□□□ -0.02
SCN8A-208ENST00000599343 MLECQ14165 292 aa14.92□□□□□ -0.02
SCN8A-208ENST00000599343 FOXD4L1Q9NU39 408 aa14.92□□□□□ -0.02
SCN8A-208ENST00000599343 STK26Q9P289 416 aa14.92□□□□□ -0.02
SCN8A-208ENST00000599343 PTMSP20962 102 aa14.92□□□□□ -0.02
SCN8A-208ENST00000599343 CCNB3Q8WWL7 1395 aa14.92□□□□□ -0.02
SCN8A-208ENST00000599343 IPO8O15397 1037 aaKnown RBP14.92□□□□□ -0.02
SCN8A-208ENST00000599343 HSP90B1P14625 803 aaKnown RBP14.91□□□□□ -0.02
SCN8A-208ENST00000599343 KTN1Q86UP2 1357 aaKnown RBP14.91□□□□□ -0.02
SCN8A-208ENST00000599343 PDE4CQ08493 712 aa14.91□□□□□ -0.02
SCN8A-208ENST00000599343 ZNF330Q9Y3S2 320 aaPredicted RBP14.91□□□□□ -0.02
SCN8A-208ENST00000599343 WRNQ14191 1432 aaPredicted RBP eCLIP14.91□□□□□ -0.02
SCN8A-208ENST00000599343 RWDD1Q9H446 243 aaPredicted RBP14.91□□□□□ -0.02
SCN8A-208ENST00000599343 GOLGA6L3A6NEY3 463 aa14.9□□□□□ -0.02
SCN8A-208ENST00000599343 CEP164Q9UPV0 1460 aa14.9□□□□□ -0.02
SCN8A-208ENST00000599343 TNNT3P45378 269 aaPredicted RBP14.9□□□□□ -0.02
SCN8A-208ENST00000599343 KIF27Q86VH2 1401 aa14.9□□□□□ -0.02
SCN8A-208ENST00000599343 NOL8Q76FK4 1167 aaKnown RBP14.89□□□□□ -0.03
SCN8A-208ENST00000599343 FOXD1Q16676 465 aa14.89□□□□□ -0.03
SCN8A-208ENST00000599343 U2AF1L5P0DN76 240 aaPredicted RBP14.88□□□□□ -0.03
SCN8A-208ENST00000599343 U2AF1Q01081 240 aaKnown RBP eCLIP14.88□□□□□ -0.03
SCN8A-208ENST00000599343 SYAP1Q96A49 352 aaPredicted RBP14.88□□□□□ -0.03
SCN8A-208ENST00000599343 KANK1Q14678 1352 aa14.88□□□□□ -0.03
SCN8A-208ENST00000599343 TCERG1O14776 1098 aaKnown RBP14.87□□□□□ -0.03
SCN8A-208ENST00000599343 HTATSF1O43719 755 aaKnown RBP14.86□□□□□ -0.03
SCN8A-208ENST00000599343 TPM4P67936 248 aa14.86□□□□□ -0.03
SCN8A-208ENST00000599343 TRIM6-TRIM34B2RNG4 842 aa14.86□□□□□ -0.03
SCN8A-208ENST00000599343 HDGFL2Q7Z4V5 671 aaPredicted RBP14.85□□□□□ -0.03
SCN8A-208ENST00000599343 CREBRFQ8IUR6 639 aa14.85□□□□□ -0.03
SCN8A-208ENST00000599343 PAK3O75914 559 aaPredicted RBP14.85□□□□□ -0.03
SCN8A-208ENST00000599343 A0A0U1RQG5 324 aaPredicted RBP14.84□□□□□ -0.03
SCN8A-208ENST00000599343 FOXD4L5Q5VV16 416 aaPredicted RBP14.84□□□□□ -0.03
SCN8A-208ENST00000599343 FOXD4L4Q8WXT5 416 aaPredicted RBP14.84□□□□□ -0.03
SCN8A-208ENST00000599343 TSHZ2Q9NRE2 1034 aa14.83□□□□□ -0.03
SCN8A-208ENST00000599343 CHMP3Q9Y3E7 222 aa14.83□□□□□ -0.03
SCN8A-208ENST00000599343 PMFBP1Q8TBY8 1022 aa14.83□□□□□ -0.04
SCN8A-208ENST00000599343 IPO9Q96P70 1041 aaKnown RBP14.83□□□□□ -0.04
SCN8A-208ENST00000599343 CALD1Q05682 793 aaKnown RBP14.82□□□□□ -0.04
SCN8A-208ENST00000599343 EIF4G1Q04637 1599 aaKnown RBP14.82□□□□□ -0.04
SCN8A-208ENST00000599343 PKD2Q13563 968 aa14.82□□□□□ -0.04
SCN8A-208ENST00000599343 GORABQ5T7V8 394 aa14.82□□□□□ -0.04
SCN8A-208ENST00000599343 GOLGA6L1Q8N7Z2 621 aa14.82□□□□□ -0.04
SCN8A-208ENST00000599343 SMC4Q9NTJ3 1288 aa14.82□□□□□ -0.04
SCN8A-208ENST00000599343 CLUAP1Q96AJ1 413 aa14.81□□□□□ -0.04
SCN8A-208ENST00000599343 PRM3Q9NNZ6 103 aa14.81□□□□□ -0.04
SCN8A-208ENST00000599343 CCDC146Q8IYE0 955 aa14.81□□□□□ -0.04
SCN8A-208ENST00000599343 CSB-PGBD3P0DP91 1061 aa14.8□□□□□ -0.04
SCN8A-208ENST00000599343 ROCK2O75116 1388 aaKnown RBP14.8□□□□□ -0.04
SCN8A-208ENST00000599343 SETD5Q9C0A6 1442 aa14.8□□□□□ -0.04
SCN8A-208ENST00000599343 HDGFP51858 240 aaKnown RBP14.79□□□□□ -0.04
SCN8A-208ENST00000599343 RASSF8Q8NHQ8 419 aa14.79□□□□□ -0.04
SCN8A-208ENST00000599343 GGT6Q6P531 493 aa14.79□□□□□ -0.04
SCN8A-208ENST00000599343 SLC4A10Q6U841 1118 aa14.79□□□□□ -0.04
SCN8A-208ENST00000599343 RALBP1Q15311 655 aa14.78□□□□□ -0.04
SCN8A-208ENST00000599343 GPATCH3Q96I76 525 aa14.78□□□□□ -0.04
SCN8A-208ENST00000599343 STK31Q9BXU1 1019 aa14.78□□□□□ -0.04
SCN8A-208ENST00000599343 ANO8Q9HCE9 1232 aaPredicted RBP14.77□□□□□ -0.05
SCN8A-208ENST00000599343 TIMELESSQ9UNS1 1208 aa14.77□□□□□ -0.05
SCN8A-208ENST00000599343 TAF7LQ5H9L4 462 aa14.76□□□□□ -0.05
SCN8A-208ENST00000599343 CSPP1Q1MSJ5 1256 aa14.76□□□□□ -0.05
SCN8A-208ENST00000599343 FHAD1B1AJZ9 1412 aa14.75□□□□□ -0.05
SCN8A-208ENST00000599343 BAZ1BQ9UIG0 1483 aaKnown RBP14.75□□□□□ -0.05
SCN8A-208ENST00000599343 SPAG9O60271 1321 aaKnown RBP14.74□□□□□ -0.05
SCN8A-208ENST00000599343 HMMRO75330 724 aa14.73□□□□□ -0.05
SCN8A-208ENST00000599343 CCDC34Q96HJ3 373 aa14.73□□□□□ -0.05
SCN8A-208ENST00000599343 TOMM22Q9NS69 142 aa14.73□□□□□ -0.05
SCN8A-208ENST00000599343 SLC4A3P48751 1232 aa14.72□□□□□ -0.05
SCN8A-208ENST00000599343 ARHGAP35Q9NRY4 1499 aa14.72□□□□□ -0.05
SCN8A-208ENST00000599343 CENPJQ9HC77 1338 aaPredicted RBP14.72□□□□□ -0.05
SCN8A-208ENST00000599343 TPM3P06753 285 aa14.72□□□□□ -0.05
SCN8A-208ENST00000599343 FOXD4L6Q3SYB3 417 aaPredicted RBP14.72□□□□□ -0.05
SCN8A-208ENST00000599343 FOXD4L3Q6VB84 417 aaPredicted RBP14.72□□□□□ -0.05
SCN8A-208ENST00000599343 KIF16BQ96L93 1317 aa14.71□□□□□ -0.05
SCN8A-208ENST00000599343 PHF14O94880 888 aa14.71□□□□□ -0.06
SCN8A-208ENST00000599343 HSP90AA2PQ14568 343 aaPredicted RBP14.71□□□□□ -0.06
SCN8A-208ENST00000599343 PES1O00541 588 aaKnown RBP14.7□□□□□ -0.06
SCN8A-208ENST00000599343 ST18O60284 1047 aa14.7□□□□□ -0.06
SCN8A-208ENST00000599343 SF3A1Q15459 793 aaKnown RBP14.7□□□□□ -0.06
SCN8A-208ENST00000599343 CCDC9Q9Y3X0 531 aaKnown RBP14.7□□□□□ -0.06
SCN8A-208ENST00000599343 TRHP20396 242 aaPredicted RBP14.69□□□□□ -0.06
SCN8A-208ENST00000599343 MPHOSPH9Q99550 1183 aa14.69□□□□□ -0.06
SCN8A-208ENST00000599343 ERCC6Q03468 1493 aa14.68□□□□□ -0.06
SCN8A-208ENST00000599343 VPS53Q5VIR6 699 aa14.68□□□□□ -0.06
SCN8A-208ENST00000599343 CCAR2Q8N163 923 aaKnown RBP14.68□□□□□ -0.06
SCN8A-208ENST00000599343 KANK4Q5T7N3 995 aaPredicted RBP14.68□□□□□ -0.06
SCN8A-208ENST00000599343 NUTM2DQ5VT03 806 aaPredicted RBP14.68□□□□□ -0.06
SCN8A-208ENST00000599343 TMX4Q9H1E5 349 aaPredicted RBP14.68□□□□□ -0.06
SCN8A-208ENST00000599343 RRP7AQ9Y3A4 280 aaKnown RBP14.67□□□□□ -0.06
SCN8A-208ENST00000599343 DDX11L8A8MPP1 907 aa14.67□□□□□ -0.06
SCN8A-208ENST00000599343 CEP89Q96ST8 783 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms