RNA–Protein interactions for RNA: ENST00000598706.1

RAB11B-203, Transcript of RAB11B, member RAS oncogene family, humanhuman

TSL 2

Gene RAB11B, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB11B-203ENST00000598706 HECW1Q76N89 1606 aa24.24■■□□□ 1.47
RAB11B-203ENST00000598706 ARHGEF12Q9NZN5 1544 aa24.24■■□□□ 1.47
RAB11B-203ENST00000598706 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP24.23■■□□□ 1.47
RAB11B-203ENST00000598706 DMRT2Q9Y5R5 561 aa24.22■■□□□ 1.47
RAB11B-203ENST00000598706 PLEKHD1A6NEE1 506 aa24.16■■□□□ 1.46
RAB11B-203ENST00000598706 UHRF1BP1Q6BDS2 1440 aa24.14■■□□□ 1.45
RAB11B-203ENST00000598706 C9orf84Q5VXU9 1444 aa24.13■■□□□ 1.45
RAB11B-203ENST00000598706 CEBPAP49715 358 aaPredicted RBP24.13■■□□□ 1.45
RAB11B-203ENST00000598706 ATP10AO60312 1499 aa24.13■■□□□ 1.45
RAB11B-203ENST00000598706 SETD1BQ9UPS6 1966 aaKnown RBP24.12■■□□□ 1.45
RAB11B-203ENST00000598706 SCAPERQ9BY12 1400 aa24.1■■□□□ 1.45
RAB11B-203ENST00000598706 PTPRTO14522 1441 aa24.1■■□□□ 1.45
RAB11B-203ENST00000598706 LTBP4Q8N2S1 1624 aa24.08■■□□□ 1.45
RAB11B-203ENST00000598706 IQSEC2Q5JU85 1478 aa24.07■■□□□ 1.44
RAB11B-203ENST00000598706 PLCH2O75038 1416 aa24.02■■□□□ 1.44
RAB11B-203ENST00000598706 C3P01024 1663 aa24.01■■□□□ 1.43
RAB11B-203ENST00000598706 MYO5CQ9NQX4 1742 aa23.98■■□□□ 1.43
RAB11B-203ENST00000598706 RANGAP1P46060 587 aaPredicted RBP23.97■■□□□ 1.43
RAB11B-203ENST00000598706 CDK13Q14004 1512 aaKnown RBP23.97■■□□□ 1.43
RAB11B-203ENST00000598706 ZNF518AQ6AHZ1 1483 aa23.95■■□□□ 1.42
RAB11B-203ENST00000598706 KDM5CP41229 1560 aa23.94■■□□□ 1.42
RAB11B-203ENST00000598706 DIP2CQ9Y2E4 1556 aa23.93■■□□□ 1.42
RAB11B-203ENST00000598706 NCOA1Q15788 1441 aa23.93■■□□□ 1.42
RAB11B-203ENST00000598706 REREQ9P2R6 1566 aa23.92■■□□□ 1.42
RAB11B-203ENST00000598706 EFCAB2Q5VUJ9 269 aa23.9■■□□□ 1.42
RAB11B-203ENST00000598706 CSRNP3Q8WYN3 585 aa23.89■■□□□ 1.41
RAB11B-203ENST00000598706 TRAPPC8Q9Y2L5 1435 aa23.89■■□□□ 1.41
RAB11B-203ENST00000598706 ABCA6Q8N139 1617 aa23.87■■□□□ 1.41
RAB11B-203ENST00000598706 AFAP1Q8N556 730 aa23.84■■□□□ 1.41
RAB11B-203ENST00000598706 CAMSAP1Q5T5Y3 1602 aa23.84■■□□□ 1.41
RAB11B-203ENST00000598706 ESF1Q9H501 851 aaKnown RBP23.83■■□□□ 1.41
RAB11B-203ENST00000598706 MYT1LQ9UL68 1186 aa23.83■■□□□ 1.41
RAB11B-203ENST00000598706 KIF14Q15058 1648 aa23.83■■□□□ 1.41
RAB11B-203ENST00000598706 AGLP35573 1532 aa23.83■■□□□ 1.41
RAB11B-203ENST00000598706 ARHGAP5Q13017 1502 aa23.83■■□□□ 1.41
RAB11B-203ENST00000598706 UBAP1LF5GYI3 381 aa23.82■■□□□ 1.4
RAB11B-203ENST00000598706 MLH3Q9UHC1 1453 aa23.79■■□□□ 1.4
RAB11B-203ENST00000598706 CNTLNQ9NXG0 1405 aa23.78■■□□□ 1.4
RAB11B-203ENST00000598706 ZNF335Q9H4Z2 1342 aaPredicted RBP23.78■■□□□ 1.4
RAB11B-203ENST00000598706 MED1Q15648 1581 aaPredicted RBP23.76■■□□□ 1.39
RAB11B-203ENST00000598706 MROH2AA6NES4 1674 aa23.75■■□□□ 1.39
RAB11B-203ENST00000598706 NPATQ14207 1427 aa23.74■■□□□ 1.39
RAB11B-203ENST00000598706 CDC42BPBQ9Y5S2 1711 aa23.73■■□□□ 1.39
RAB11B-203ENST00000598706 NCKAP5LQ9HCH0 1330 aa23.71■■□□□ 1.39
RAB11B-203ENST00000598706 CDK11AQ9UQ88 783 aaPredicted RBP23.71■■□□□ 1.39
RAB11B-203ENST00000598706 SUPT6HQ7KZ85 1726 aaKnown RBP23.7■■□□□ 1.39
RAB11B-203ENST00000598706 ZNF142P52746 1687 aaPredicted RBP23.7■■□□□ 1.39
RAB11B-203ENST00000598706 TROQ12816 1431 aaPredicted RBP23.7■■□□□ 1.38
RAB11B-203ENST00000598706 KIDINS220Q9ULH0 1771 aa23.7■■□□□ 1.38
RAB11B-203ENST00000598706 ITSN2Q9NZM3 1697 aa23.7■■□□□ 1.38
RAB11B-203ENST00000598706 ABCC1P33527 1531 aa23.69■■□□□ 1.38
RAB11B-203ENST00000598706 EEA1Q15075 1411 aa23.69■■□□□ 1.38
RAB11B-203ENST00000598706 ATP1B4Q9UN42 357 aaPredicted RBP23.69■■□□□ 1.38
RAB11B-203ENST00000598706 MYO3AQ8NEV4 1616 aa23.68■■□□□ 1.38
RAB11B-203ENST00000598706 PLA2R1Q13018 1463 aa23.68■■□□□ 1.38
RAB11B-203ENST00000598706 CLIP1P30622 1438 aa23.67■■□□□ 1.38
RAB11B-203ENST00000598706 FMN1Q68DA7 1419 aa23.67■■□□□ 1.38
RAB11B-203ENST00000598706 PREX2Q70Z35 1606 aa23.66■■□□□ 1.38
RAB11B-203ENST00000598706 TCOF1Q13428 1488 aaKnown RBP23.64■■□□□ 1.38
RAB11B-203ENST00000598706 PKD2Q13563 968 aa23.64■■□□□ 1.37
RAB11B-203ENST00000598706 HSPA1LP34931 641 aa23.63■■□□□ 1.37
RAB11B-203ENST00000598706 CEP170BQ9Y4F5 1589 aaPredicted RBP23.63■■□□□ 1.37
RAB11B-203ENST00000598706 ZMYM3Q14202 1370 aa23.63■■□□□ 1.37
RAB11B-203ENST00000598706 LRRIQ1Q96JM4 1722 aa23.62■■□□□ 1.37
RAB11B-203ENST00000598706 SCAF1Q9H7N4 1312 aaKnown RBP23.6■■□□□ 1.37
RAB11B-203ENST00000598706 CLTCQ00610 1675 aaKnown RBP23.6■■□□□ 1.37
RAB11B-203ENST00000598706 PPP6R1Q9UPN7 881 aa23.57■■□□□ 1.36
RAB11B-203ENST00000598706 PIP4K2BP78356 416 aa23.56■■□□□ 1.36
RAB11B-203ENST00000598706 SAMD9LQ8IVG5 1584 aa23.55■■□□□ 1.36
RAB11B-203ENST00000598706 ARHGAP35Q9NRY4 1499 aa23.54■■□□□ 1.36
RAB11B-203ENST00000598706 PTPRKQ15262 1439 aa23.53■■□□□ 1.36
RAB11B-203ENST00000598706 CDC42BPAQ5VT25 1732 aa23.53■■□□□ 1.36
RAB11B-203ENST00000598706 PHF23Q9BUL5 403 aaPredicted RBP23.52■■□□□ 1.36
RAB11B-203ENST00000598706 CPS1P31327 1500 aa23.52■■□□□ 1.36
RAB11B-203ENST00000598706 TOM1O60784 492 aa23.51■■□□□ 1.35
RAB11B-203ENST00000598706 POLR1AO95602 1720 aaPredicted RBP23.5■■□□□ 1.35
RAB11B-203ENST00000598706 PLXNC1O60486 1568 aa23.48■■□□□ 1.35
RAB11B-203ENST00000598706 DNMT1P26358 1616 aaKnown RBP23.47■■□□□ 1.35
RAB11B-203ENST00000598706 SYCP2Q9BX26 1530 aa23.46■■□□□ 1.35
RAB11B-203ENST00000598706 A2ML1A8K2U0 1454 aa23.45■■□□□ 1.34
RAB11B-203ENST00000598706 NEURL4Q96JN8 1562 aa23.44■■□□□ 1.34
RAB11B-203ENST00000598706 ATP7AQ04656 1500 aa23.44■■□□□ 1.34
RAB11B-203ENST00000598706 SHANK2Q9UPX8 1470 aa23.44■■□□□ 1.34
RAB11B-203ENST00000598706 SPAG9O60271 1321 aaKnown RBP23.43■■□□□ 1.34
RAB11B-203ENST00000598706 INO80Q9ULG1 1556 aaPredicted RBP23.42■■□□□ 1.34
RAB11B-203ENST00000598706 A2MP01023 1474 aa23.41■■□□□ 1.34
RAB11B-203ENST00000598706 CCDC18Q5T9S5 1454 aa23.41■■□□□ 1.34
RAB11B-203ENST00000598706 ALKQ9UM73 1620 aa23.41■■□□□ 1.34
RAB11B-203ENST00000598706 UBTFP17480 764 aaKnown RBP23.38■■□□□ 1.33
RAB11B-203ENST00000598706 GGT6Q6P531 493 aa23.38■■□□□ 1.33
RAB11B-203ENST00000598706 ZNF777Q9ULD5 760 aaPredicted RBP23.38■■□□□ 1.33
RAB11B-203ENST00000598706 VWDEQ8N2E2 1590 aa23.36■■□□□ 1.33
RAB11B-203ENST00000598706 EHMT2Q96KQ7 1210 aa23.35■■□□□ 1.33
RAB11B-203ENST00000598706 HNRNPMP52272 730 aaKnown RBP eCLIP23.34■■□□□ 1.33
RAB11B-203ENST00000598706 ADGBQ8N7X0 1667 aa23.34■■□□□ 1.33
RAB11B-203ENST00000598706 GPATCH8Q9UKJ3 1502 aaKnown RBP23.31■■□□□ 1.32
RAB11B-203ENST00000598706 CASKIN1Q8WXD9 1431 aa23.31■■□□□ 1.32
RAB11B-203ENST00000598706 KIAA1107Q9UPP5 1409 aa23.3■■□□□ 1.32
RAB11B-203ENST00000598706 PLEKHH2Q8IVE3 1493 aa23.29■■□□□ 1.32
RAB11B-203ENST00000598706 TNRQ92752 1358 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms