RNA–Protein interactions for RNA: ENST00000597740.1

CAPN12-208, Transcript of calpain 12, humanhuman

TSL 4

Gene CAPN12, Length 547 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN12-208ENST00000597740 FER1L4A9Z1Z3 1794 aa27.07■■□□□ 1.92
CAPN12-208ENST00000597740 SCAPERQ9BY12 1400 aa27.06■■□□□ 1.92
CAPN12-208ENST00000597740 CDK13Q14004 1512 aaKnown RBP27.04■■□□□ 1.92
CAPN12-208ENST00000597740 PLCH2O75038 1416 aa27.01■■□□□ 1.91
CAPN12-208ENST00000597740 ARHGEF12Q9NZN5 1544 aa26.98■■□□□ 1.91
CAPN12-208ENST00000597740 ATP10AO60312 1499 aa26.98■■□□□ 1.91
CAPN12-208ENST00000597740 C9orf84Q5VXU9 1444 aa26.97■■□□□ 1.91
CAPN12-208ENST00000597740 CEBPAP49715 358 aaPredicted RBP26.96■■□□□ 1.91
CAPN12-208ENST00000597740 PREX1Q8TCU6 1659 aa26.95■■□□□ 1.9
CAPN12-208ENST00000597740 EFCAB2Q5VUJ9 269 aa26.92■■□□□ 1.9
CAPN12-208ENST00000597740 ATP1B4Q9UN42 357 aaPredicted RBP26.92■■□□□ 1.9
CAPN12-208ENST00000597740 MYO5CQ9NQX4 1742 aa26.88■■□□□ 1.89
CAPN12-208ENST00000597740 DISP3Q9P2K9 1392 aa26.88■■□□□ 1.89
CAPN12-208ENST00000597740 DMRT2Q9Y5R5 561 aa26.87■■□□□ 1.89
CAPN12-208ENST00000597740 UHRF1BP1Q6BDS2 1440 aa26.85■■□□□ 1.89
CAPN12-208ENST00000597740 MYT1LQ9UL68 1186 aa26.84■■□□□ 1.89
CAPN12-208ENST00000597740 ZNF518AQ6AHZ1 1483 aa26.84■■□□□ 1.89
CAPN12-208ENST00000597740 STRCQ7RTU9 1775 aa26.84■■□□□ 1.89
CAPN12-208ENST00000597740 ILDR2Q71H61 639 aa26.83■■□□□ 1.89
CAPN12-208ENST00000597740 KIF14Q15058 1648 aa26.83■■□□□ 1.88
CAPN12-208ENST00000597740 AFAP1Q8N556 730 aa26.82■■□□□ 1.88
CAPN12-208ENST00000597740 CDK11AQ9UQ88 783 aaPredicted RBP26.82■■□□□ 1.88
CAPN12-208ENST00000597740 ARHGAP5Q13017 1502 aa26.81■■□□□ 1.88
CAPN12-208ENST00000597740 EHMT2Q96KQ7 1210 aa26.8■■□□□ 1.88
CAPN12-208ENST00000597740 FMN1Q68DA7 1419 aa26.8■■□□□ 1.88
CAPN12-208ENST00000597740 KDM5CP41229 1560 aa26.79■■□□□ 1.88
CAPN12-208ENST00000597740 DIP2CQ9Y2E4 1556 aa26.76■■□□□ 1.87
CAPN12-208ENST00000597740 TROQ12816 1431 aaPredicted RBP26.75■■□□□ 1.87
CAPN12-208ENST00000597740 SOCS7O14512 581 aa26.74■■□□□ 1.87
CAPN12-208ENST00000597740 UBTFP17480 764 aaKnown RBP26.74■■□□□ 1.87
CAPN12-208ENST00000597740 CLIP1P30622 1438 aa26.73■■□□□ 1.87
CAPN12-208ENST00000597740 ARHGAP35Q9NRY4 1499 aa26.72■■□□□ 1.87
CAPN12-208ENST00000597740 REREQ9P2R6 1566 aa26.71■■□□□ 1.87
CAPN12-208ENST00000597740 PTPRTO14522 1441 aa26.71■■□□□ 1.87
CAPN12-208ENST00000597740 SETD1BQ9UPS6 1966 aaKnown RBP26.71■■□□□ 1.87
CAPN12-208ENST00000597740 C3P01024 1663 aa26.7■■□□□ 1.87
CAPN12-208ENST00000597740 ABCA6Q8N139 1617 aa26.7■■□□□ 1.86
CAPN12-208ENST00000597740 ESF1Q9H501 851 aaKnown RBP26.7■■□□□ 1.86
CAPN12-208ENST00000597740 LOC105371045A0A1W2PR82 267 aa26.68■■□□□ 1.86
CAPN12-208ENST00000597740 MLH3Q9UHC1 1453 aa26.68■■□□□ 1.86
CAPN12-208ENST00000597740 SPATA31D1Q6ZQQ2 1576 aa26.67■■□□□ 1.86
CAPN12-208ENST00000597740 AGLP35573 1532 aa26.64■■□□□ 1.85
CAPN12-208ENST00000597740 TRAPPC8Q9Y2L5 1435 aa26.64■■□□□ 1.85
CAPN12-208ENST00000597740 CDC42BPBQ9Y5S2 1711 aa26.63■■□□□ 1.85
CAPN12-208ENST00000597740 LTBP4Q8N2S1 1624 aa26.62■■□□□ 1.85
CAPN12-208ENST00000597740 ABCC1P33527 1531 aa26.61■■□□□ 1.85
CAPN12-208ENST00000597740 LRRIQ1Q96JM4 1722 aa26.61■■□□□ 1.85
CAPN12-208ENST00000597740 NCOA1Q15788 1441 aa26.59■■□□□ 1.85
CAPN12-208ENST00000597740 PREX2Q70Z35 1606 aa26.59■■□□□ 1.85
CAPN12-208ENST00000597740 ITSN2Q9NZM3 1697 aa26.57■■□□□ 1.84
CAPN12-208ENST00000597740 CNTLNQ9NXG0 1405 aa26.56■■□□□ 1.84
CAPN12-208ENST00000597740 IQSEC2Q5JU85 1478 aa26.55■■□□□ 1.84
CAPN12-208ENST00000597740 KIDINS220Q9ULH0 1771 aa26.53■■□□□ 1.84
CAPN12-208ENST00000597740 CAMSAP1Q5T5Y3 1602 aa26.51■■□□□ 1.83
CAPN12-208ENST00000597740 CCDC18Q5T9S5 1454 aa26.48■■□□□ 1.83
CAPN12-208ENST00000597740 NPATQ14207 1427 aa26.48■■□□□ 1.83
CAPN12-208ENST00000597740 ZNF777Q9ULD5 760 aaPredicted RBP26.47■■□□□ 1.83
CAPN12-208ENST00000597740 NCKAP5LQ9HCH0 1330 aa26.46■■□□□ 1.83
CAPN12-208ENST00000597740 SAMD9LQ8IVG5 1584 aa26.46■■□□□ 1.83
CAPN12-208ENST00000597740 ZMYM3Q14202 1370 aa26.46■■□□□ 1.83
CAPN12-208ENST00000597740 MROH2AA6NES4 1674 aa26.45■■□□□ 1.82
CAPN12-208ENST00000597740 CASKIN1Q8WXD9 1431 aa26.45■■□□□ 1.82
CAPN12-208ENST00000597740 CDC42BPAQ5VT25 1732 aa26.45■■□□□ 1.82
CAPN12-208ENST00000597740 ZNF335Q9H4Z2 1342 aaPredicted RBP26.44■■□□□ 1.82
CAPN12-208ENST00000597740 SPAG9O60271 1321 aaKnown RBP26.41■■□□□ 1.82
CAPN12-208ENST00000597740 UBAP1LF5GYI3 381 aa26.41■■□□□ 1.82
CAPN12-208ENST00000597740 SYCP2Q9BX26 1530 aa26.4■■□□□ 1.82
CAPN12-208ENST00000597740 SUPT6HQ7KZ85 1726 aaKnown RBP26.39■■□□□ 1.82
CAPN12-208ENST00000597740 HNRNPMP52272 730 aaKnown RBP eCLIP26.37■■□□□ 1.81
CAPN12-208ENST00000597740 CLTCQ00610 1675 aaKnown RBP26.37■■□□□ 1.81
CAPN12-208ENST00000597740 MYO3AQ8NEV4 1616 aa26.36■■□□□ 1.81
CAPN12-208ENST00000597740 ATP7AQ04656 1500 aa26.34■■□□□ 1.81
CAPN12-208ENST00000597740 PKD2Q13563 968 aa26.34■■□□□ 1.81
CAPN12-208ENST00000597740 PLA2R1Q13018 1463 aa26.34■■□□□ 1.81
CAPN12-208ENST00000597740 GPATCH8Q9UKJ3 1502 aaKnown RBP26.34■■□□□ 1.81
CAPN12-208ENST00000597740 ZNF142P52746 1687 aaPredicted RBP26.33■■□□□ 1.81
CAPN12-208ENST00000597740 CEP170BQ9Y4F5 1589 aaPredicted RBP26.33■■□□□ 1.8
CAPN12-208ENST00000597740 GGT6Q6P531 493 aa26.32■■□□□ 1.8
CAPN12-208ENST00000597740 PTPRKQ15262 1439 aa26.31■■□□□ 1.8
CAPN12-208ENST00000597740 CEP162Q5TB80 1403 aa26.31■■□□□ 1.8
CAPN12-208ENST00000597740 A2MP01023 1474 aa26.31■■□□□ 1.8
CAPN12-208ENST00000597740 FYCO1Q9BQS8 1478 aa26.31■■□□□ 1.8
CAPN12-208ENST00000597740 PLXNC1O60486 1568 aa26.31■■□□□ 1.8
CAPN12-208ENST00000597740 TCOF1Q13428 1488 aaKnown RBP26.3■■□□□ 1.8
CAPN12-208ENST00000597740 INO80Q9ULG1 1556 aaPredicted RBP26.29■■□□□ 1.8
CAPN12-208ENST00000597740 CFDP1Q9UEE9 299 aaPredicted RBP26.27■■□□□ 1.8
CAPN12-208ENST00000597740 PPP6R1Q9UPN7 881 aa26.27■■□□□ 1.8
CAPN12-208ENST00000597740 KIAA1107Q9UPP5 1409 aa26.27■■□□□ 1.8
CAPN12-208ENST00000597740 PLEKHH2Q8IVE3 1493 aa26.26■■□□□ 1.79
CAPN12-208ENST00000597740 CCNB3Q8WWL7 1395 aa26.22■■□□□ 1.79
CAPN12-208ENST00000597740 SCAF1Q9H7N4 1312 aaKnown RBP26.21■■□□□ 1.79
CAPN12-208ENST00000597740 A2ML1A8K2U0 1454 aa26.18■■□□□ 1.78
CAPN12-208ENST00000597740 PIP4K2BP78356 416 aa26.17■■□□□ 1.78
CAPN12-208ENST00000597740 ADGBQ8N7X0 1667 aa26.16■■□□□ 1.78
CAPN12-208ENST00000597740 HSPA1LP34931 641 aa26.16■■□□□ 1.78
CAPN12-208ENST00000597740 DNMT1P26358 1616 aaKnown RBP26.16■■□□□ 1.78
CAPN12-208ENST00000597740 ZNF644Q9H582 1327 aaPredicted RBP26.14■■□□□ 1.77
CAPN12-208ENST00000597740 MTUS2Q5JR59 1369 aa26.13■■□□□ 1.77
CAPN12-208ENST00000597740 MED1Q15648 1581 aaPredicted RBP26.12■■□□□ 1.77
CAPN12-208ENST00000597740 TOM1O60784 492 aa26.11■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 74.1 ms