RNA–Protein interactions for RNA: ENST00000596899.1

ZNF43-208, Transcript of zinc finger protein 43, humanhuman

TSL 3

Gene ZNF43, Length 447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF43-208ENST00000596899 SAMD9Q5K651 1589 aa22.57■■□□□ 1.2
ZNF43-208ENST00000596899 PRXQ9BXM0 1461 aa22.55■■□□□ 1.2
ZNF43-208ENST00000596899 NUP153P49790 1475 aaKnown RBP22.54■■□□□ 1.2
ZNF43-208ENST00000596899 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.53■■□□□ 1.2
ZNF43-208ENST00000596899 CEBPAP49715 358 aaPredicted RBP22.53■■□□□ 1.2
ZNF43-208ENST00000596899 UHRF1BP1Q6BDS2 1440 aa22.53■■□□□ 1.2
ZNF43-208ENST00000596899 LTBP4Q8N2S1 1624 aa22.51■■□□□ 1.19
ZNF43-208ENST00000596899 PTPRTO14522 1441 aa22.5■■□□□ 1.19
ZNF43-208ENST00000596899 IQSEC2Q5JU85 1478 aa22.49■■□□□ 1.19
ZNF43-208ENST00000596899 SETD1BQ9UPS6 1966 aaKnown RBP22.49■■□□□ 1.19
ZNF43-208ENST00000596899 C9orf84Q5VXU9 1444 aa22.48■■□□□ 1.19
ZNF43-208ENST00000596899 ATP10AO60312 1499 aa22.47■■□□□ 1.19
ZNF43-208ENST00000596899 PLEKHD1A6NEE1 506 aa22.45■■□□□ 1.18
ZNF43-208ENST00000596899 SCAPERQ9BY12 1400 aa22.43■■□□□ 1.18
ZNF43-208ENST00000596899 C3P01024 1663 aa22.41■■□□□ 1.18
ZNF43-208ENST00000596899 PLCH2O75038 1416 aa22.32■■□□□ 1.16
ZNF43-208ENST00000596899 NCOA1Q15788 1441 aa22.32■■□□□ 1.16
ZNF43-208ENST00000596899 MYO5CQ9NQX4 1742 aa22.32■■□□□ 1.16
ZNF43-208ENST00000596899 DIP2CQ9Y2E4 1556 aa22.29■■□□□ 1.16
ZNF43-208ENST00000596899 UBAP1LF5GYI3 381 aa22.28■■□□□ 1.16
ZNF43-208ENST00000596899 RANGAP1P46060 587 aaPredicted RBP22.28■■□□□ 1.16
ZNF43-208ENST00000596899 ZNF518AQ6AHZ1 1483 aa22.28■■□□□ 1.16
ZNF43-208ENST00000596899 CDK13Q14004 1512 aaKnown RBP22.27■■□□□ 1.16
ZNF43-208ENST00000596899 KDM5CP41229 1560 aa22.26■■□□□ 1.15
ZNF43-208ENST00000596899 MED1Q15648 1581 aaPredicted RBP22.26■■□□□ 1.15
ZNF43-208ENST00000596899 REREQ9P2R6 1566 aa22.26■■□□□ 1.15
ZNF43-208ENST00000596899 CAMSAP1Q5T5Y3 1602 aa22.26■■□□□ 1.15
ZNF43-208ENST00000596899 TRAPPC8Q9Y2L5 1435 aa22.25■■□□□ 1.15
ZNF43-208ENST00000596899 ABCA6Q8N139 1617 aa22.24■■□□□ 1.15
ZNF43-208ENST00000596899 EFCAB2Q5VUJ9 269 aa22.22■■□□□ 1.15
ZNF43-208ENST00000596899 ZNF335Q9H4Z2 1342 aaPredicted RBP22.22■■□□□ 1.15
ZNF43-208ENST00000596899 ESF1Q9H501 851 aaKnown RBP22.21■■□□□ 1.15
ZNF43-208ENST00000596899 MYT1LQ9UL68 1186 aa22.21■■□□□ 1.15
ZNF43-208ENST00000596899 AGLP35573 1532 aa22.18■■□□□ 1.14
ZNF43-208ENST00000596899 AFAP1Q8N556 730 aa22.18■■□□□ 1.14
ZNF43-208ENST00000596899 SUPT6HQ7KZ85 1726 aaKnown RBP22.17■■□□□ 1.14
ZNF43-208ENST00000596899 ARHGAP5Q13017 1502 aa22.16■■□□□ 1.14
ZNF43-208ENST00000596899 KIF14Q15058 1648 aa22.16■■□□□ 1.14
ZNF43-208ENST00000596899 NCKAP5LQ9HCH0 1330 aa22.14■■□□□ 1.14
ZNF43-208ENST00000596899 CNTLNQ9NXG0 1405 aa22.14■■□□□ 1.13
ZNF43-208ENST00000596899 MROH2AA6NES4 1674 aa22.13■■□□□ 1.13
ZNF43-208ENST00000596899 MLH3Q9UHC1 1453 aa22.11■■□□□ 1.13
ZNF43-208ENST00000596899 HSPA1LP34931 641 aa22.11■■□□□ 1.13
ZNF43-208ENST00000596899 CSRNP3Q8WYN3 585 aa22.11■■□□□ 1.13
ZNF43-208ENST00000596899 ZNF142P52746 1687 aaPredicted RBP22.11■■□□□ 1.13
ZNF43-208ENST00000596899 SCAF1Q9H7N4 1312 aaKnown RBP22.1■■□□□ 1.13
ZNF43-208ENST00000596899 NPATQ14207 1427 aa22.1■■□□□ 1.13
ZNF43-208ENST00000596899 MYO3AQ8NEV4 1616 aa22.09■■□□□ 1.13
ZNF43-208ENST00000596899 CDC42BPBQ9Y5S2 1711 aa22.07■■□□□ 1.12
ZNF43-208ENST00000596899 PLA2R1Q13018 1463 aa22.07■■□□□ 1.12
ZNF43-208ENST00000596899 KIDINS220Q9ULH0 1771 aa22.05■■□□□ 1.12
ZNF43-208ENST00000596899 ITSN2Q9NZM3 1697 aa22.05■■□□□ 1.12
ZNF43-208ENST00000596899 PIP4K2BP78356 416 aa22.05■■□□□ 1.12
ZNF43-208ENST00000596899 PHF23Q9BUL5 403 aaPredicted RBP22.05■■□□□ 1.12
ZNF43-208ENST00000596899 CEP170BQ9Y4F5 1589 aaPredicted RBP22.04■■□□□ 1.12
ZNF43-208ENST00000596899 TCOF1Q13428 1488 aaKnown RBP22.03■■□□□ 1.12
ZNF43-208ENST00000596899 PKD2Q13563 968 aa22.03■■□□□ 1.12
ZNF43-208ENST00000596899 ABCC1P33527 1531 aa22.02■■□□□ 1.12
ZNF43-208ENST00000596899 ATP1B4Q9UN42 357 aaPredicted RBP22.02■■□□□ 1.12
ZNF43-208ENST00000596899 CLTCQ00610 1675 aaKnown RBP22.01■■□□□ 1.11
ZNF43-208ENST00000596899 CDK11AQ9UQ88 783 aaPredicted RBP22■■□□□ 1.11
ZNF43-208ENST00000596899 ZMYM3Q14202 1370 aa21.99■■□□□ 1.11
ZNF43-208ENST00000596899 PREX2Q70Z35 1606 aa21.99■■□□□ 1.11
ZNF43-208ENST00000596899 PPP6R1Q9UPN7 881 aa21.99■■□□□ 1.11
ZNF43-208ENST00000596899 TROQ12816 1431 aaPredicted RBP21.98■■□□□ 1.11
ZNF43-208ENST00000596899 TOM1O60784 492 aa21.97■■□□□ 1.11
ZNF43-208ENST00000596899 CLIP1P30622 1438 aa21.97■■□□□ 1.11
ZNF43-208ENST00000596899 CPS1P31327 1500 aa21.95■■□□□ 1.1
ZNF43-208ENST00000596899 POLR1AO95602 1720 aaPredicted RBP21.94■■□□□ 1.1
ZNF43-208ENST00000596899 LRRIQ1Q96JM4 1722 aa21.94■■□□□ 1.1
ZNF43-208ENST00000596899 FMN1Q68DA7 1419 aa21.92■■□□□ 1.1
ZNF43-208ENST00000596899 PTPRKQ15262 1439 aa21.9■■□□□ 1.1
ZNF43-208ENST00000596899 SAMD9LQ8IVG5 1584 aa21.89■■□□□ 1.09
ZNF43-208ENST00000596899 DNMT1P26358 1616 aaKnown RBP21.88■■□□□ 1.09
ZNF43-208ENST00000596899 EEA1Q15075 1411 aa21.88■■□□□ 1.09
ZNF43-208ENST00000596899 CDC42BPAQ5VT25 1732 aa21.87■■□□□ 1.09
ZNF43-208ENST00000596899 SHANK2Q9UPX8 1470 aa21.87■■□□□ 1.09
ZNF43-208ENST00000596899 ALKQ9UM73 1620 aa21.87■■□□□ 1.09
ZNF43-208ENST00000596899 NEURL4Q96JN8 1562 aa21.87■■□□□ 1.09
ZNF43-208ENST00000596899 A2ML1A8K2U0 1454 aa21.84■■□□□ 1.09
ZNF43-208ENST00000596899 PLXNC1O60486 1568 aa21.83■■□□□ 1.09
ZNF43-208ENST00000596899 SENP3Q9H4L4 574 aaPredicted RBP21.81■■□□□ 1.08
ZNF43-208ENST00000596899 SYCP2Q9BX26 1530 aa21.8■■□□□ 1.08
ZNF43-208ENST00000596899 ARHGAP35Q9NRY4 1499 aa21.8■■□□□ 1.08
ZNF43-208ENST00000596899 ATP7AQ04656 1500 aa21.8■■□□□ 1.08
ZNF43-208ENST00000596899 VWDEQ8N2E2 1590 aa21.79■■□□□ 1.08
ZNF43-208ENST00000596899 INO80Q9ULG1 1556 aaPredicted RBP21.78■■□□□ 1.08
ZNF43-208ENST00000596899 SPAG9O60271 1321 aaKnown RBP21.78■■□□□ 1.08
ZNF43-208ENST00000596899 A2MP01023 1474 aa21.77■■□□□ 1.08
ZNF43-208ENST00000596899 GGT6Q6P531 493 aa21.76■■□□□ 1.07
ZNF43-208ENST00000596899 RGS17Q9UGC6 210 aaPredicted RBP21.74■■□□□ 1.07
ZNF43-208ENST00000596899 ZNF777Q9ULD5 760 aaPredicted RBP21.74■■□□□ 1.07
ZNF43-208ENST00000596899 RNF17Q9BXT8 1623 aaKnown RBP21.73■■□□□ 1.07
ZNF43-208ENST00000596899 ADGBQ8N7X0 1667 aa21.72■■□□□ 1.07
ZNF43-208ENST00000596899 STRCP1A6NGW2 1772 aa21.7■■□□□ 1.06
ZNF43-208ENST00000596899 CCDC18Q5T9S5 1454 aa21.69■■□□□ 1.06
ZNF43-208ENST00000596899 HNRNPMP52272 730 aaKnown RBP eCLIP21.68■■□□□ 1.067e-7■■■■□ 23.6
ZNF43-208ENST00000596899 SYNMO15061 1565 aa21.68■■□□□ 1.06
ZNF43-208ENST00000596899 IQGAP1P46940 1657 aa21.67■■□□□ 1.06
ZNF43-208ENST00000596899 DEPDC5O75140 1603 aa21.67■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms