RNA–Protein interactions for RNA: ENST00000593977.1

LINC00649-204, long intergenic non-protein coding RNA 649, humanhuman

TSL 5 BASIC

Gene LINC00649, Length 640 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00649-204ENST00000593977 RASEFQ8IZ41 740 aa7.34□□□□□ -1.23
LINC00649-204ENST00000593977 OTUD5Q96G74 571 aa7.33□□□□□ -1.24
LINC00649-204ENST00000593977 BAZ1BQ9UIG0 1483 aaKnown RBP7.32□□□□□ -1.24
LINC00649-204ENST00000593977 HECW2Q9P2P5 1572 aa7.31□□□□□ -1.24
LINC00649-204ENST00000593977 DISP3Q9P2K9 1392 aa7.31□□□□□ -1.24
LINC00649-204ENST00000593977 SUPT5HO00267 1087 aaKnown RBP7.3□□□□□ -1.24
LINC00649-204ENST00000593977 PYGBP11216 843 aa7.3□□□□□ -1.24
LINC00649-204ENST00000593977 CD44P16070 742 aaKnown RBP7.3□□□□□ -1.24
LINC00649-204ENST00000593977 CEP164Q9UPV0 1460 aa7.3□□□□□ -1.24
LINC00649-204ENST00000593977 ZNF608Q9ULD9 1512 aaPredicted RBP7.29□□□□□ -1.24
LINC00649-204ENST00000593977 SMARCA4P51532 1647 aa7.27□□□□□ -1.25
LINC00649-204ENST00000593977 WDR70Q9NW82 654 aa7.27□□□□□ -1.25
LINC00649-204ENST00000593977 ZNF467Q7Z7K2 595 aaPredicted RBP7.26□□□□□ -1.25
LINC00649-204ENST00000593977 SYNJ2O15056 1496 aa7.25□□□□□ -1.25
LINC00649-204ENST00000593977 URB2Q14146 1524 aaKnown RBP7.25□□□□□ -1.25
LINC00649-204ENST00000593977 FANCD2Q9BXW9 1451 aa7.24□□□□□ -1.25
LINC00649-204ENST00000593977 NPM2Q86SE8 214 aaKnown RBP7.24□□□□□ -1.25
LINC00649-204ENST00000593977 KCNV2Q8TDN2 545 aa7.22□□□□□ -1.25
LINC00649-204ENST00000593977 TRIM26Q12899 539 aaPredicted RBP7.21□□□□□ -1.26
LINC00649-204ENST00000593977 PDAP1Q13442 181 aaKnown RBP7.21□□□□□ -1.26
LINC00649-204ENST00000593977 CHD1O14646 1710 aa7.21□□□□□ -1.26
LINC00649-204ENST00000593977 IFT140Q96RY7 1462 aa7.2□□□□□ -1.26
LINC00649-204ENST00000593977 POTEB2H3BUK9 544 aa7.2□□□□□ -1.26
LINC00649-204ENST00000593977 LMOD2Q6P5Q4 547 aa7.2□□□□□ -1.26
LINC00649-204ENST00000593977 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.2□□□□□ -1.26
LINC00649-204ENST00000593977 UBTFP17480 764 aaKnown RBP7.19□□□□□ -1.26
LINC00649-204ENST00000593977 CADPS2Q86UW7 1296 aa7.19□□□□□ -1.26
LINC00649-204ENST00000593977 FARP1Q9Y4F1 1045 aaPredicted RBP7.19□□□□□ -1.26
LINC00649-204ENST00000593977 PEG3Q9GZU2 1588 aa7.19□□□□□ -1.26
LINC00649-204ENST00000593977 GAPVD1Q14C86 1478 aa7.17□□□□□ -1.26
LINC00649-204ENST00000593977 CLASP1Q7Z460 1538 aa7.17□□□□□ -1.26
LINC00649-204ENST00000593977 ZNF579Q8NAF0 562 aaKnown RBP7.17□□□□□ -1.26
LINC00649-204ENST00000593977 ADGRL1O94910 1474 aa7.17□□□□□ -1.26
LINC00649-204ENST00000593977 TSPYL2Q9H2G4 693 aaPredicted RBP7.16□□□□□ -1.26
LINC00649-204ENST00000593977 KIF13AQ9H1H9 1805 aa7.15□□□□□ -1.26
LINC00649-204ENST00000593977 ARHGEF1Q92888 912 aaKnown RBP7.15□□□□□ -1.26
LINC00649-204ENST00000593977 EIF4G3O43432 1585 aaKnown RBP7.14□□□□□ -1.27
LINC00649-204ENST00000593977 AQRO60306 1485 aaKnown RBP eCLIP7.14□□□□□ -1.27
LINC00649-204ENST00000593977 HRCP23327 699 aa7.14□□□□□ -1.27
LINC00649-204ENST00000593977 PSEN1P49768 467 aa7.14□□□□□ -1.27
LINC00649-204ENST00000593977 MFRPQ9BY79 579 aa7.14□□□□□ -1.27
LINC00649-204ENST00000593977 PCDHB8Q9UN66 801 aa7.13□□□□□ -1.27
LINC00649-204ENST00000593977 PCDHB13Q9Y5F0 798 aa7.13□□□□□ -1.27
LINC00649-204ENST00000593977 FAM69CQ0P6D2 419 aa7.11□□□□□ -1.27
LINC00649-204ENST00000593977 E2F4Q16254 413 aa7.11□□□□□ -1.27
LINC00649-204ENST00000593977 ZRANB1Q9UGI0 708 aa7.11□□□□□ -1.27
LINC00649-204ENST00000593977 KDM6BO15054 1643 aa7.11□□□□□ -1.27
LINC00649-204ENST00000593977 CFTRP13569 1480 aa7.11□□□□□ -1.27
LINC00649-204ENST00000593977 GALR2O43603 387 aaPredicted RBP7.1□□□□□ -1.27
LINC00649-204ENST00000593977 CCDC61Q9Y6R9 512 aa7.1□□□□□ -1.27
LINC00649-204ENST00000593977 SPATA31D1Q6ZQQ2 1576 aa7.09□□□□□ -1.27
LINC00649-204ENST00000593977 SOX12O15370 315 aa7.09□□□□□ -1.27
LINC00649-204ENST00000593977 BRPF1P55201 1214 aaPredicted RBP7.09□□□□□ -1.27
LINC00649-204ENST00000593977 NLRP6P59044 892 aa7.09□□□□□ -1.27
LINC00649-204ENST00000593977 ZC3H15Q8WU90 426 aaKnown RBP7.08□□□□□ -1.28
LINC00649-204ENST00000593977 FAM163AQ96GL9 167 aaPredicted RBP7.08□□□□□ -1.28
LINC00649-204ENST00000593977 ABCC10Q5T3U5 1492 aa7.07□□□□□ -1.28
LINC00649-204ENST00000593977 TESPA1A2RU30 521 aaPredicted RBP7.07□□□□□ -1.28
LINC00649-204ENST00000593977 LCE2DQ5TA82 110 aaPredicted RBP7.07□□□□□ -1.28
LINC00649-204ENST00000593977 MAMSTRQ6ZN01 415 aa7.07□□□□□ -1.28
LINC00649-204ENST00000593977 FBXO22Q8NEZ5 403 aa7.07□□□□□ -1.28
LINC00649-204ENST00000593977 PPP1R37O75864 691 aa7.06□□□□□ -1.28
LINC00649-204ENST00000593977 SYNJ1O43426 1573 aa7.06□□□□□ -1.28
LINC00649-204ENST00000593977 PAK3O75914 559 aaPredicted RBP7.05□□□□□ -1.28
LINC00649-204ENST00000593977 SMYD5Q6GMV2 418 aa7.05□□□□□ -1.28
LINC00649-204ENST00000593977 EFCAB3Q8N7B9 438 aa7.05□□□□□ -1.28
LINC00649-204ENST00000593977 CERKQ8TCT0 537 aa7.05□□□□□ -1.28
LINC00649-204ENST00000593977 CHMP7Q8WUX9 453 aaPredicted RBP7.05□□□□□ -1.28
LINC00649-204ENST00000593977 MROH2BQ7Z745 1585 aa7.04□□□□□ -1.28
LINC00649-204ENST00000593977 SEMA3EO15041 775 aa7.04□□□□□ -1.28
LINC00649-204ENST00000593977 NEUROD2Q15784 382 aa7.04□□□□□ -1.28
LINC00649-204ENST00000593977 IFNL1Q8IU54 200 aa7.04□□□□□ -1.28
LINC00649-204ENST00000593977 CABP2Q9NPB3 220 aa7.03□□□□□ -1.28
LINC00649-204ENST00000593977 PHF8Q9UPP1 1060 aa7.03□□□□□ -1.28
LINC00649-204ENST00000593977 PDE4AP27815 886 aa7.02□□□□□ -1.29
LINC00649-204ENST00000593977 ARIH1Q9Y4X5 557 aaPredicted RBP7.02□□□□□ -1.29
LINC00649-204ENST00000593977 TOPBP1Q92547 1522 aa7.01□□□□□ -1.29
LINC00649-204ENST00000593977 PELP1Q8IZL8 1130 aaKnown RBP7.01□□□□□ -1.29
LINC00649-204ENST00000593977 TARBP1Q13395 1621 aaKnown RBP7.01□□□□□ -1.29
LINC00649-204ENST00000593977 MAP3K13O43283 966 aa7□□□□□ -1.29
LINC00649-204ENST00000593977 ZMYND10O75800 440 aa7□□□□□ -1.29
LINC00649-204ENST00000593977 MFSD10Q14728 455 aa7□□□□□ -1.29
LINC00649-204ENST00000593977 KIF12Q96FN5 646 aa7□□□□□ -1.29
LINC00649-204ENST00000593977 SLC24A3Q9HC58 644 aa7□□□□□ -1.29
LINC00649-204ENST00000593977 NCKAP5LQ9HCH0 1330 aa7□□□□□ -1.29
LINC00649-204ENST00000593977 SNAPC4Q5SXM2 1469 aa6.99□□□□□ -1.29
LINC00649-204ENST00000593977 POTEJP0CG39 1038 aa6.99□□□□□ -1.29
LINC00649-204ENST00000593977 CDAN1Q8IWY9 1227 aa6.99□□□□□ -1.29
LINC00649-204ENST00000593977 LARP6Q9BRS8 491 aaKnown RBP6.99□□□□□ -1.29
LINC00649-204ENST00000593977 METRNQ9UJH8 293 aa6.99□□□□□ -1.29
LINC00649-204ENST00000593977 DIP2BQ9P265 1576 aa6.99□□□□□ -1.29
LINC00649-204ENST00000593977 C7P10643 843 aa6.98□□□□□ -1.29
LINC00649-204ENST00000593977 CRISPLD2Q9H0B8 497 aa6.98□□□□□ -1.29
LINC00649-204ENST00000593977 SCUBE2Q9NQ36 999 aa6.98□□□□□ -1.29
LINC00649-204ENST00000593977 TDRD9Q8NDG6 1382 aaKnown RBP6.97□□□□□ -1.29
LINC00649-204ENST00000593977 SLC39A7Q92504 469 aa6.97□□□□□ -1.29
LINC00649-204ENST00000593977 DDX27Q96GQ7 796 aaKnown RBP6.97□□□□□ -1.29
LINC00649-204ENST00000593977 CAMK2BQ13554 666 aa6.95□□□□□ -1.3
LINC00649-204ENST00000593977 BARGINQ6ZT62 677 aa6.95□□□□□ -1.3
LINC00649-204ENST00000593977 MAGI1Q96QZ7 1491 aaPredicted RBP6.95□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms