RNA–Protein interactions for RNA: ENST00000592741.5

PRKCSH-217, Transcript of protein kinase C substrate 80K-H, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKCSH, Length 2,100 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-217ENST00000592741 PRG4Q92954 1404 aaPredicted RBP23.59■■□□□ 1.37
PRKCSH-217ENST00000592741 DENND4BO75064 1496 aaPredicted RBP23.58■■□□□ 1.36
PRKCSH-217ENST00000592741 DDX10Q13206 875 aaKnown RBP23.56■■□□□ 1.36
PRKCSH-217ENST00000592741 KDM5BQ9UGL1 1544 aa23.56■■□□□ 1.36
PRKCSH-217ENST00000592741 ZNF644Q9H582 1327 aaPredicted RBP23.53■■□□□ 1.36
PRKCSH-217ENST00000592741 MPHOSPH9Q99550 1183 aa23.53■■□□□ 1.36
PRKCSH-217ENST00000592741 CAMSAP2Q08AD1 1489 aa23.53■■□□□ 1.36
PRKCSH-217ENST00000592741 PELP1Q8IZL8 1130 aaKnown RBP23.53■■□□□ 1.36
PRKCSH-217ENST00000592741 KIF14Q15058 1648 aa23.52■■□□□ 1.36
PRKCSH-217ENST00000592741 ABCA8O94911 1581 aa23.52■■□□□ 1.36
PRKCSH-217ENST00000592741 GPATCH8Q9UKJ3 1502 aaKnown RBP23.51■■□□□ 1.35
PRKCSH-217ENST00000592741 HIRIP3Q9BW71 556 aaPredicted RBP23.5■■□□□ 1.35
PRKCSH-217ENST00000592741 CFDP1Q9UEE9 299 aaPredicted RBP23.5■■□□□ 1.35
PRKCSH-217ENST00000592741 ADGBQ8N7X0 1667 aa23.48■■□□□ 1.35
PRKCSH-217ENST00000592741 CROCC2H7BZ55 1655 aa23.45■■□□□ 1.34
PRKCSH-217ENST00000592741 PLEKHD1A6NEE1 506 aa23.42■■□□□ 1.34
PRKCSH-217ENST00000592741 ADGRL2O95490 1459 aa23.42■■□□□ 1.34
PRKCSH-217ENST00000592741 ATP10BO94823 1461 aa23.41■■□□□ 1.34
PRKCSH-217ENST00000592741 ANKRD30BQ9BXX2 1392 aa23.4■■□□□ 1.34
PRKCSH-217ENST00000592741 NCOA1Q15788 1441 aa23.39■■□□□ 1.33
PRKCSH-217ENST00000592741 CDC42BPAQ5VT25 1732 aa23.39■■□□□ 1.33
PRKCSH-217ENST00000592741 ZNF777Q9ULD5 760 aaPredicted RBP23.39■■□□□ 1.33
PRKCSH-217ENST00000592741 ANP32CO43423 234 aa23.38■■□□□ 1.33
PRKCSH-217ENST00000592741 KCNH8Q96L42 1107 aa23.38■■□□□ 1.33
PRKCSH-217ENST00000592741 ABCC10Q5T3U5 1492 aa23.38■■□□□ 1.33
PRKCSH-217ENST00000592741 RPRD2Q5VT52 1461 aaKnown RBP23.37■■□□□ 1.33
PRKCSH-217ENST00000592741 FOXD1Q16676 465 aa23.37■■□□□ 1.33
PRKCSH-217ENST00000592741 SLC4A1APQ9BWU0 796 aaKnown RBP23.36■■□□□ 1.33
PRKCSH-217ENST00000592741 CCER2I3L3R5 266 aa23.35■■□□□ 1.33
PRKCSH-217ENST00000592741 CHD1O14646 1710 aa23.35■■□□□ 1.33
PRKCSH-217ENST00000592741 ANKRD30AQ9BXX3 1397 aa23.35■■□□□ 1.33
PRKCSH-217ENST00000592741 PTPRGP23470 1445 aa23.34■■□□□ 1.33
PRKCSH-217ENST00000592741 L3MBTL2Q969R5 705 aa23.33■■□□□ 1.33
PRKCSH-217ENST00000592741 PZPP20742 1482 aa23.33■■□□□ 1.33
PRKCSH-217ENST00000592741 SHANK2Q9UPX8 1470 aa23.32■■□□□ 1.32
PRKCSH-217ENST00000592741 TEX14Q8IWB6 1497 aa23.31■■□□□ 1.32
PRKCSH-217ENST00000592741 HSPA5P11021 654 aaKnown RBP23.3■■□□□ 1.32
PRKCSH-217ENST00000592741 EIF4G2P78344 907 aaKnown RBP eCLIP23.29■■□□□ 1.32
PRKCSH-217ENST00000592741 SHROOM2Q13796 1616 aa23.26■■□□□ 1.31
PRKCSH-217ENST00000592741 C9orf84Q5VXU9 1444 aa23.26■■□□□ 1.31
PRKCSH-217ENST00000592741 ANKRD50Q9ULJ7 1429 aa23.26■■□□□ 1.31
PRKCSH-217ENST00000592741 KIAA1107Q9UPP5 1409 aa23.24■■□□□ 1.31
PRKCSH-217ENST00000592741 ARHGEF5Q12774 1597 aa23.23■■□□□ 1.31
PRKCSH-217ENST00000592741 WASHC2AQ641Q2 1341 aa23.21■■□□□ 1.31
PRKCSH-217ENST00000592741 PREX2Q70Z35 1606 aa23.2■■□□□ 1.3
PRKCSH-217ENST00000592741 TSPY4P0CV99 314 aa23.19■■□□□ 1.3
PRKCSH-217ENST00000592741 TSPY10P0CW01 314 aa23.19■■□□□ 1.3
PRKCSH-217ENST00000592741 NBPF8Q3BBV2 869 aa23.18■■□□□ 1.3
PRKCSH-217ENST00000592741 CDC42BPBQ9Y5S2 1711 aa23.16■■□□□ 1.3
PRKCSH-217ENST00000592741 SUPT16HQ9Y5B9 1047 aaKnown RBP23.16■■□□□ 1.3
PRKCSH-217ENST00000592741 KDM5DQ9BY66 1539 aa23.16■■□□□ 1.3
PRKCSH-217ENST00000592741 PKD2Q13563 968 aa23.15■■□□□ 1.3
PRKCSH-217ENST00000592741 SAMD9LQ8IVG5 1584 aa23.15■■□□□ 1.3
PRKCSH-217ENST00000592741 MBD5Q9P267 1494 aa23.15■■□□□ 1.3
PRKCSH-217ENST00000592741 CCDC141Q6ZP82 1450 aa23.14■■□□□ 1.3
PRKCSH-217ENST00000592741 CNTLNQ9NXG0 1405 aa23.13■■□□□ 1.29
PRKCSH-217ENST00000592741 KIF15Q9NS87 1388 aa23.13■■□□□ 1.29
PRKCSH-217ENST00000592741 HNRNPMP52272 730 aaKnown RBP eCLIP23.12■■□□□ 1.29
PRKCSH-217ENST00000592741 NUP155O75694 1391 aa23.12■■□□□ 1.29
PRKCSH-217ENST00000592741 ABCC2Q92887 1545 aa23.12■■□□□ 1.29
PRKCSH-217ENST00000592741 CCDC7Q96M83 1385 aa23.11■■□□□ 1.29
PRKCSH-217ENST00000592741 RSPH4AQ5TD94 716 aa23.09■■□□□ 1.29
PRKCSH-217ENST00000592741 POLR1AO95602 1720 aaPredicted RBP23.09■■□□□ 1.29
PRKCSH-217ENST00000592741 SPATA31E1Q6ZUB1 1445 aa23.09■■□□□ 1.29
PRKCSH-217ENST00000592741 ERCC6L2Q5T890 1561 aa23.08■■□□□ 1.29
PRKCSH-217ENST00000592741 TTC37Q6PGP7 1564 aa23.08■■□□□ 1.29
PRKCSH-217ENST00000592741 ARHGAP5Q13017 1502 aa23.06■■□□□ 1.28
PRKCSH-217ENST00000592741 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP23.06■■□□□ 1.282e-23■□□□□ 8.5
PRKCSH-217ENST00000592741 MAST1Q9Y2H9 1570 aa23.04■■□□□ 1.28
PRKCSH-217ENST00000592741 SYCP2Q9BX26 1530 aa23.04■■□□□ 1.28
PRKCSH-217ENST00000592741 C11orf95C9JLR9 678 aaPredicted RBP23.04■■□□□ 1.28
PRKCSH-217ENST00000592741 MYO5CQ9NQX4 1742 aa23.04■■□□□ 1.28
PRKCSH-217ENST00000592741 CLASP1Q7Z460 1538 aa23.02■■□□□ 1.28
PRKCSH-217ENST00000592741 ARHGEF12Q9NZN5 1544 aa23.02■■□□□ 1.27
PRKCSH-217ENST00000592741 PLEKHH2Q8IVE3 1493 aa23.01■■□□□ 1.27
PRKCSH-217ENST00000592741 UHRF1BP1Q6BDS2 1440 aa23■■□□□ 1.27
PRKCSH-217ENST00000592741 KIF7Q2M1P5 1343 aa22.99■■□□□ 1.27
PRKCSH-217ENST00000592741 FAM135AQ9P2D6 1515 aa22.98■■□□□ 1.27
PRKCSH-217ENST00000592741 USP47Q96K76 1375 aa22.97■■□□□ 1.27
PRKCSH-217ENST00000592741 UHRF1BP1LA0JNW5 1464 aa22.97■■□□□ 1.27
PRKCSH-217ENST00000592741 ZNF326Q5BKZ1 582 aaKnown RBP22.96■■□□□ 1.27
PRKCSH-217ENST00000592741 ZCCHC11Q5TAX3 1644 aaKnown RBP22.96■■□□□ 1.27
PRKCSH-217ENST00000592741 RALGAPBQ86X10 1494 aa22.96■■□□□ 1.27
PRKCSH-217ENST00000592741 PLXNC1O60486 1568 aa22.95■■□□□ 1.27
PRKCSH-217ENST00000592741 UNC13BO14795 1591 aa22.95■■□□□ 1.26
PRKCSH-217ENST00000592741 KDM5CP41229 1560 aa22.95■■□□□ 1.26
PRKCSH-217ENST00000592741 PRKRIP1Q9H875 184 aaPredicted RBP22.92■■□□□ 1.26
PRKCSH-217ENST00000592741 NEFLP07196 543 aa22.9■■□□□ 1.26
PRKCSH-217ENST00000592741 PLCH2O75038 1416 aa22.89■■□□□ 1.26
PRKCSH-217ENST00000592741 HNRNPUQ00839 825 aaKnown RBP eCLIP22.89■■□□□ 1.25
PRKCSH-217ENST00000592741 BCORL1Q5H9F3 1711 aa22.89■■□□□ 1.25
PRKCSH-217ENST00000592741 FKBP8Q14318 412 aa22.88■■□□□ 1.25
PRKCSH-217ENST00000592741 ARID4BQ4LE39 1312 aaPredicted RBP22.87■■□□□ 1.25
PRKCSH-217ENST00000592741 DUOX2Q9NRD8 1548 aa22.87■■□□□ 1.25
PRKCSH-217ENST00000592741 IQGAP3Q86VI3 1631 aa22.86■■□□□ 1.25
PRKCSH-217ENST00000592741 CCDC144AA2RUR9 1427 aa22.84■■□□□ 1.25
PRKCSH-217ENST00000592741 EFCAB2Q5VUJ9 269 aa22.84■■□□□ 1.25
PRKCSH-217ENST00000592741 CARD11Q9BXL7 1154 aa22.84■■□□□ 1.25
PRKCSH-217ENST00000592741 ABCC1P33527 1531 aa22.83■■□□□ 1.25
PRKCSH-217ENST00000592741 ERBINQ96RT1 1412 aa22.83■■□□□ 1.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms