RNA–Protein interactions for RNA: ENST00000591798.5

DNMT1-225, Transcript of DNA methyltransferase 1, humanhuman

TSL 3

Gene DNMT1, Length 521 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-225ENST00000591798 SPATA31D1Q6ZQQ2 1576 aa14.81□□□□□ -0.04
DNMT1-225ENST00000591798 STRCQ7RTU9 1775 aa14.8□□□□□ -0.04
DNMT1-225ENST00000591798 MAGI2Q86UL8 1455 aa14.8□□□□□ -0.04
DNMT1-225ENST00000591798 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP14.79□□□□□ -0.04
DNMT1-225ENST00000591798 HECW1Q76N89 1606 aa14.78□□□□□ -0.04
DNMT1-225ENST00000591798 ARHGEF12Q9NZN5 1544 aa14.77□□□□□ -0.04
DNMT1-225ENST00000591798 SETD1BQ9UPS6 1966 aaKnown RBP14.77□□□□□ -0.04
DNMT1-225ENST00000591798 MLECQ14165 292 aa14.77□□□□□ -0.05
DNMT1-225ENST00000591798 PLEKHD1A6NEE1 506 aa14.75□□□□□ -0.05
DNMT1-225ENST00000591798 DMRT2Q9Y5R5 561 aa14.74□□□□□ -0.05
DNMT1-225ENST00000591798 ATP10AO60312 1499 aa14.71□□□□□ -0.05
DNMT1-225ENST00000591798 C9orf84Q5VXU9 1444 aa14.71□□□□□ -0.05
DNMT1-225ENST00000591798 UHRF1BP1Q6BDS2 1440 aa14.7□□□□□ -0.06
DNMT1-225ENST00000591798 SCAPERQ9BY12 1400 aa14.7□□□□□ -0.06
DNMT1-225ENST00000591798 CEBPAP49715 358 aaPredicted RBP14.7□□□□□ -0.06
DNMT1-225ENST00000591798 PTPRTO14522 1441 aa14.67□□□□□ -0.06
DNMT1-225ENST00000591798 PLCH2O75038 1416 aa14.66□□□□□ -0.06
DNMT1-225ENST00000591798 LTBP4Q8N2S1 1624 aa14.66□□□□□ -0.06
DNMT1-225ENST00000591798 IQSEC2Q5JU85 1478 aa14.65□□□□□ -0.06
DNMT1-225ENST00000591798 MYO5CQ9NQX4 1742 aa14.65□□□□□ -0.06
DNMT1-225ENST00000591798 C3P01024 1663 aa14.64□□□□□ -0.07
DNMT1-225ENST00000591798 CDK13Q14004 1512 aaKnown RBP14.63□□□□□ -0.07
DNMT1-225ENST00000591798 RANGAP1P46060 587 aaPredicted RBP14.63□□□□□ -0.07
DNMT1-225ENST00000591798 KDM5CP41229 1560 aa14.61□□□□□ -0.07
DNMT1-225ENST00000591798 CSRNP3Q8WYN3 585 aa14.61□□□□□ -0.07
DNMT1-225ENST00000591798 ZNF518AQ6AHZ1 1483 aa14.61□□□□□ -0.07
DNMT1-225ENST00000591798 REREQ9P2R6 1566 aa14.6□□□□□ -0.07
DNMT1-225ENST00000591798 DIP2CQ9Y2E4 1556 aa14.6□□□□□ -0.07
DNMT1-225ENST00000591798 EFCAB2Q5VUJ9 269 aa14.59□□□□□ -0.07
DNMT1-225ENST00000591798 NCOA1Q15788 1441 aa14.58□□□□□ -0.08
DNMT1-225ENST00000591798 ABCA6Q8N139 1617 aa14.56□□□□□ -0.08
DNMT1-225ENST00000591798 TRAPPC8Q9Y2L5 1435 aa14.56□□□□□ -0.08
DNMT1-225ENST00000591798 KIF14Q15058 1648 aa14.55□□□□□ -0.08
DNMT1-225ENST00000591798 AFAP1Q8N556 730 aa14.54□□□□□ -0.08
DNMT1-225ENST00000591798 AGLP35573 1532 aa14.54□□□□□ -0.08
DNMT1-225ENST00000591798 ARHGAP5Q13017 1502 aa14.53□□□□□ -0.08
DNMT1-225ENST00000591798 CAMSAP1Q5T5Y3 1602 aa14.52□□□□□ -0.08
DNMT1-225ENST00000591798 MLH3Q9UHC1 1453 aa14.51□□□□□ -0.09
DNMT1-225ENST00000591798 ESF1Q9H501 851 aaKnown RBP14.51□□□□□ -0.09
DNMT1-225ENST00000591798 MYT1LQ9UL68 1186 aa14.51□□□□□ -0.09
DNMT1-225ENST00000591798 CDC42BPBQ9Y5S2 1711 aa14.51□□□□□ -0.09
DNMT1-225ENST00000591798 EEA1Q15075 1411 aa14.49□□□□□ -0.09
DNMT1-225ENST00000591798 CNTLNQ9NXG0 1405 aa14.49□□□□□ -0.09
DNMT1-225ENST00000591798 MROH2AA6NES4 1674 aa14.49□□□□□ -0.09
DNMT1-225ENST00000591798 UBAP1LF5GYI3 381 aa14.49□□□□□ -0.09
DNMT1-225ENST00000591798 CDK11AQ9UQ88 783 aaPredicted RBP14.48□□□□□ -0.09
DNMT1-225ENST00000591798 TROQ12816 1431 aaPredicted RBP14.48□□□□□ -0.09
DNMT1-225ENST00000591798 NPATQ14207 1427 aa14.48□□□□□ -0.09
DNMT1-225ENST00000591798 KIDINS220Q9ULH0 1771 aa14.47□□□□□ -0.09
DNMT1-225ENST00000591798 ZNF335Q9H4Z2 1342 aaPredicted RBP14.47□□□□□ -0.09
DNMT1-225ENST00000591798 ITSN2Q9NZM3 1697 aa14.47□□□□□ -0.09
DNMT1-225ENST00000591798 SUPT6HQ7KZ85 1726 aaKnown RBP14.46□□□□□ -0.09
DNMT1-225ENST00000591798 ABCC1P33527 1531 aa14.46□□□□□ -0.09
DNMT1-225ENST00000591798 ZNF142P52746 1687 aaPredicted RBP14.46□□□□□ -0.09
DNMT1-225ENST00000591798 FMN1Q68DA7 1419 aa14.46□□□□□ -0.09
DNMT1-225ENST00000591798 LRRIQ1Q96JM4 1722 aa14.45□□□□□ -0.1
DNMT1-225ENST00000591798 ATP1B4Q9UN42 357 aaPredicted RBP14.45□□□□□ -0.1
DNMT1-225ENST00000591798 PREX2Q70Z35 1606 aa14.44□□□□□ -0.1
DNMT1-225ENST00000591798 NCKAP5LQ9HCH0 1330 aa14.44□□□□□ -0.1
DNMT1-225ENST00000591798 MED1Q15648 1581 aaPredicted RBP14.44□□□□□ -0.1
DNMT1-225ENST00000591798 CLIP1P30622 1438 aa14.44□□□□□ -0.1
DNMT1-225ENST00000591798 MYO3AQ8NEV4 1616 aa14.43□□□□□ -0.1
DNMT1-225ENST00000591798 PLA2R1Q13018 1463 aa14.43□□□□□ -0.1
DNMT1-225ENST00000591798 PKD2Q13563 968 aa14.41□□□□□ -0.1
DNMT1-225ENST00000591798 ZMYM3Q14202 1370 aa14.41□□□□□ -0.1
DNMT1-225ENST00000591798 TCOF1Q13428 1488 aaKnown RBP14.41□□□□□ -0.1
DNMT1-225ENST00000591798 CLTCQ00610 1675 aaKnown RBP14.39□□□□□ -0.11
DNMT1-225ENST00000591798 CEP170BQ9Y4F5 1589 aaPredicted RBP14.39□□□□□ -0.11
DNMT1-225ENST00000591798 ARHGAP35Q9NRY4 1499 aa14.38□□□□□ -0.11
DNMT1-225ENST00000591798 CDC42BPAQ5VT25 1732 aa14.38□□□□□ -0.11
DNMT1-225ENST00000591798 SAMD9LQ8IVG5 1584 aa14.38□□□□□ -0.11
DNMT1-225ENST00000591798 HSPA1LP34931 641 aa14.37□□□□□ -0.11
DNMT1-225ENST00000591798 PPP6R1Q9UPN7 881 aa14.35□□□□□ -0.11
DNMT1-225ENST00000591798 PTPRKQ15262 1439 aa14.34□□□□□ -0.11
DNMT1-225ENST00000591798 SCAF1Q9H7N4 1312 aaKnown RBP14.34□□□□□ -0.11
DNMT1-225ENST00000591798 PLXNC1O60486 1568 aa14.34□□□□□ -0.11
DNMT1-225ENST00000591798 POLR1AO95602 1720 aaPredicted RBP14.33□□□□□ -0.12
DNMT1-225ENST00000591798 PIP4K2BP78356 416 aa14.32□□□□□ -0.12
DNMT1-225ENST00000591798 CPS1P31327 1500 aa14.31□□□□□ -0.12
DNMT1-225ENST00000591798 SYCP2Q9BX26 1530 aa14.31□□□□□ -0.12
DNMT1-225ENST00000591798 DNMT1P26358 1616 aaKnown RBP14.31□□□□□ -0.12
DNMT1-225ENST00000591798 TOM1O60784 492 aa14.31□□□□□ -0.12
DNMT1-225ENST00000591798 ATP7AQ04656 1500 aa14.31□□□□□ -0.12
DNMT1-225ENST00000591798 SPAG9O60271 1321 aaKnown RBP14.3□□□□□ -0.12
DNMT1-225ENST00000591798 A2ML1A8K2U0 1454 aa14.3□□□□□ -0.12
DNMT1-225ENST00000591798 CCDC18Q5T9S5 1454 aa14.3□□□□□ -0.12
DNMT1-225ENST00000591798 INO80Q9ULG1 1556 aaPredicted RBP14.3□□□□□ -0.12
DNMT1-225ENST00000591798 UBTFP17480 764 aaKnown RBP14.29□□□□□ -0.12
DNMT1-225ENST00000591798 NEURL4Q96JN8 1562 aa14.29□□□□□ -0.12
DNMT1-225ENST00000591798 A2MP01023 1474 aa14.28□□□□□ -0.12
DNMT1-225ENST00000591798 SHANK2Q9UPX8 1470 aa14.28□□□□□ -0.12
DNMT1-225ENST00000591798 ALKQ9UM73 1620 aa14.26□□□□□ -0.13
DNMT1-225ENST00000591798 EHMT2Q96KQ7 1210 aa14.26□□□□□ -0.13
DNMT1-225ENST00000591798 ZNF777Q9ULD5 760 aaPredicted RBP14.26□□□□□ -0.13
DNMT1-225ENST00000591798 ADGBQ8N7X0 1667 aa14.26□□□□□ -0.13
DNMT1-225ENST00000591798 CASKIN1Q8WXD9 1431 aa14.25□□□□□ -0.13
DNMT1-225ENST00000591798 GGT6Q6P531 493 aa14.25□□□□□ -0.13
DNMT1-225ENST00000591798 HNRNPMP52272 730 aaKnown RBP eCLIP14.24□□□□□ -0.13
DNMT1-225ENST00000591798 VWDEQ8N2E2 1590 aa14.24□□□□□ -0.13
DNMT1-225ENST00000591798 GPATCH8Q9UKJ3 1502 aaKnown RBP14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 9 ms