RNA–Protein interactions for RNA: ENST00000591515.6

LSM7-206, Transcript of LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM7, Length 710 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM7-206ENST00000591515 MLECQ14165 292 aa37.82■■■■□ 3.64
LSM7-206ENST00000591515 PREX1Q8TCU6 1659 aa37.81■■■■□ 3.64
LSM7-206ENST00000591515 CDK13Q14004 1512 aaKnown RBP37.81■■■■□ 3.64
LSM7-206ENST00000591515 ARHGEF12Q9NZN5 1544 aa37.78■■■■□ 3.64
LSM7-206ENST00000591515 SCAPERQ9BY12 1400 aa37.77■■■■□ 3.64
LSM7-206ENST00000591515 PLCH2O75038 1416 aa37.72■■■■□ 3.63
LSM7-206ENST00000591515 MYO5CQ9NQX4 1742 aa37.71■■■■□ 3.63
LSM7-206ENST00000591515 STRCQ7RTU9 1775 aa37.7■■■■□ 3.63
LSM7-206ENST00000591515 ATP10AO60312 1499 aa37.7■■■■□ 3.63
LSM7-206ENST00000591515 C9orf84Q5VXU9 1444 aa37.69■■■■□ 3.62
LSM7-206ENST00000591515 UBTFP17480 764 aaKnown RBP37.63■■■■□ 3.61
LSM7-206ENST00000591515 CEBPAP49715 358 aaPredicted RBP37.58■■■■□ 3.61
LSM7-206ENST00000591515 KIF14Q15058 1648 aa37.58■■■■□ 3.61
LSM7-206ENST00000591515 SETD1BQ9UPS6 1966 aaKnown RBP37.57■■■■□ 3.61
LSM7-206ENST00000591515 EHMT2Q96KQ7 1210 aa37.54■■■■□ 3.6
LSM7-206ENST00000591515 KDM5CP41229 1560 aa37.54■■■■□ 3.6
LSM7-206ENST00000591515 EFCAB2Q5VUJ9 269 aa37.52■■■■□ 3.6
LSM7-206ENST00000591515 ZNF518AQ6AHZ1 1483 aa37.52■■■■□ 3.6
LSM7-206ENST00000591515 DISP3Q9P2K9 1392 aa37.5■■■■□ 3.59
LSM7-206ENST00000591515 UHRF1BP1Q6BDS2 1440 aa37.49■■■■□ 3.59
LSM7-206ENST00000591515 DIP2CQ9Y2E4 1556 aa37.49■■■■□ 3.59
LSM7-206ENST00000591515 ILDR2Q71H61 639 aa37.48■■■■□ 3.59
LSM7-206ENST00000591515 C3P01024 1663 aa37.47■■■■□ 3.59
LSM7-206ENST00000591515 REREQ9P2R6 1566 aa37.44■■■■□ 3.58
LSM7-206ENST00000591515 DMRT2Q9Y5R5 561 aa37.44■■■■□ 3.58
LSM7-206ENST00000591515 ARHGAP5Q13017 1502 aa37.44■■■■□ 3.58
LSM7-206ENST00000591515 ABCA6Q8N139 1617 aa37.43■■■■□ 3.58
LSM7-206ENST00000591515 LRRIQ1Q96JM4 1722 aa37.41■■■■□ 3.58
LSM7-206ENST00000591515 FMN1Q68DA7 1419 aa37.41■■■■□ 3.58
LSM7-206ENST00000591515 AFAP1Q8N556 730 aa37.4■■■■□ 3.58
LSM7-206ENST00000591515 CDC42BPBQ9Y5S2 1711 aa37.39■■■■□ 3.58
LSM7-206ENST00000591515 ATP1B4Q9UN42 357 aaPredicted RBP37.39■■■■□ 3.58
LSM7-206ENST00000591515 TROQ12816 1431 aaPredicted RBP37.37■■■■□ 3.57
LSM7-206ENST00000591515 ARHGAP35Q9NRY4 1499 aa37.36■■■■□ 3.57
LSM7-206ENST00000591515 SPATA31D1Q6ZQQ2 1576 aa37.35■■■■□ 3.57
LSM7-206ENST00000591515 SOCS7O14512 581 aa37.35■■■■□ 3.57
LSM7-206ENST00000591515 PTPRTO14522 1441 aa37.35■■■■□ 3.57
LSM7-206ENST00000591515 CDK11AQ9UQ88 783 aaPredicted RBP37.33■■■■□ 3.57
LSM7-206ENST00000591515 MLH3Q9UHC1 1453 aa37.3■■■■□ 3.56
LSM7-206ENST00000591515 LTBP4Q8N2S1 1624 aa37.29■■■■□ 3.56
LSM7-206ENST00000591515 AGLP35573 1532 aa37.29■■■■□ 3.56
LSM7-206ENST00000591515 MYT1LQ9UL68 1186 aa37.28■■■■□ 3.56
LSM7-206ENST00000591515 PREX2Q70Z35 1606 aa37.28■■■■□ 3.56
LSM7-206ENST00000591515 ITSN2Q9NZM3 1697 aa37.28■■■■□ 3.56
LSM7-206ENST00000591515 CLIP1P30622 1438 aa37.27■■■■□ 3.56
LSM7-206ENST00000591515 ABCC1P33527 1531 aa37.26■■■■□ 3.55
LSM7-206ENST00000591515 KIDINS220Q9ULH0 1771 aa37.22■■■■□ 3.55
LSM7-206ENST00000591515 TRAPPC8Q9Y2L5 1435 aa37.21■■■■□ 3.55
LSM7-206ENST00000591515 NCOA1Q15788 1441 aa37.19■■■■□ 3.54
LSM7-206ENST00000591515 IQSEC2Q5JU85 1478 aa37.18■■■■□ 3.54
LSM7-206ENST00000591515 CDC42BPAQ5VT25 1732 aa37.14■■■■□ 3.54
LSM7-206ENST00000591515 MROH2AA6NES4 1674 aa37.12■■■■□ 3.53
LSM7-206ENST00000591515 ESF1Q9H501 851 aaKnown RBP37.12■■■■□ 3.53
LSM7-206ENST00000591515 CNTLNQ9NXG0 1405 aa37.1■■■■□ 3.53
LSM7-206ENST00000591515 CAMSAP1Q5T5Y3 1602 aa37.09■■■■□ 3.53
LSM7-206ENST00000591515 LOC105371045A0A1W2PR82 267 aa37.03■■■■□ 3.52
LSM7-206ENST00000591515 SAMD9LQ8IVG5 1584 aa37.03■■■■□ 3.52
LSM7-206ENST00000591515 NPATQ14207 1427 aa37.02■■■■□ 3.52
LSM7-206ENST00000591515 CCDC18Q5T9S5 1454 aa37.01■■■■□ 3.51
LSM7-206ENST00000591515 SUPT6HQ7KZ85 1726 aaKnown RBP37■■■■□ 3.51
LSM7-206ENST00000591515 ZNF142P52746 1687 aaPredicted RBP36.97■■■■□ 3.51
LSM7-206ENST00000591515 CLTCQ00610 1675 aaKnown RBP36.96■■■■□ 3.51
LSM7-206ENST00000591515 CASKIN1Q8WXD9 1431 aa36.95■■■■□ 3.51
LSM7-206ENST00000591515 MYO3AQ8NEV4 1616 aa36.95■■■■□ 3.51
LSM7-206ENST00000591515 CEP162Q5TB80 1403 aa36.93■■■■□ 3.5
LSM7-206ENST00000591515 SYCP2Q9BX26 1530 aa36.93■■■■□ 3.5
LSM7-206ENST00000591515 ZMYM3Q14202 1370 aa36.92■■■■□ 3.5
LSM7-206ENST00000591515 ZNF335Q9H4Z2 1342 aaPredicted RBP36.89■■■■□ 3.5
LSM7-206ENST00000591515 NCKAP5LQ9HCH0 1330 aa36.89■■■■□ 3.5
LSM7-206ENST00000591515 PLXNC1O60486 1568 aa36.87■■■■□ 3.49
LSM7-206ENST00000591515 INO80Q9ULG1 1556 aaPredicted RBP36.85■■■■□ 3.49
LSM7-206ENST00000591515 CEP170BQ9Y4F5 1589 aaPredicted RBP36.85■■■■□ 3.49
LSM7-206ENST00000591515 ATP7AQ04656 1500 aa36.85■■■■□ 3.49
LSM7-206ENST00000591515 PLA2R1Q13018 1463 aa36.84■■■■□ 3.49
LSM7-206ENST00000591515 ZNF777Q9ULD5 760 aaPredicted RBP36.82■■■■□ 3.48
LSM7-206ENST00000591515 SPAG9O60271 1321 aaKnown RBP36.81■■■■□ 3.48
LSM7-206ENST00000591515 TCOF1Q13428 1488 aaKnown RBP36.81■■■■□ 3.48
LSM7-206ENST00000591515 GPATCH8Q9UKJ3 1502 aaKnown RBP36.8■■■■□ 3.48
LSM7-206ENST00000591515 UBAP1LF5GYI3 381 aa36.8■■■■□ 3.48
LSM7-206ENST00000591515 PTPRKQ15262 1439 aa36.78■■■■□ 3.48
LSM7-206ENST00000591515 FYCO1Q9BQS8 1478 aa36.78■■■■□ 3.48
LSM7-206ENST00000591515 A2MP01023 1474 aa36.75■■■■□ 3.47
LSM7-206ENST00000591515 HNRNPMP52272 730 aaKnown RBP eCLIP36.75■■■■□ 3.47
LSM7-206ENST00000591515 PKD2Q13563 968 aa36.74■■■■□ 3.47
LSM7-206ENST00000591515 ADGBQ8N7X0 1667 aa36.7■■■■□ 3.47
LSM7-206ENST00000591515 KIAA1107Q9UPP5 1409 aa36.7■■■■□ 3.47
LSM7-206ENST00000591515 PLEKHH2Q8IVE3 1493 aa36.68■■■■□ 3.46
LSM7-206ENST00000591515 DNMT1P26358 1616 aaKnown RBP36.65■■■■□ 3.46
LSM7-206ENST00000591515 POLR1AO95602 1720 aaPredicted RBP36.65■■■■□ 3.46
LSM7-206ENST00000591515 GGT6Q6P531 493 aa36.64■■■■□ 3.46
LSM7-206ENST00000591515 PPP6R1Q9UPN7 881 aa36.62■■■■□ 3.45
LSM7-206ENST00000591515 A2ML1A8K2U0 1454 aa36.61■■■■□ 3.45
LSM7-206ENST00000591515 CFDP1Q9UEE9 299 aaPredicted RBP36.59■■■■□ 3.45
LSM7-206ENST00000591515 MED1Q15648 1581 aaPredicted RBP36.58■■■■□ 3.45
LSM7-206ENST00000591515 NEURL4Q96JN8 1562 aa36.57■■■■□ 3.44
LSM7-206ENST00000591515 CCNB3Q8WWL7 1395 aa36.55■■■■□ 3.44
LSM7-206ENST00000591515 VPS8Q8N3P4 1428 aa36.51■■■■□ 3.43
LSM7-206ENST00000591515 CPS1P31327 1500 aa36.49■■■■□ 3.43
LSM7-206ENST00000591515 TIAM1Q13009 1591 aa36.49■■■■□ 3.43
LSM7-206ENST00000591515 HSPA1LP34931 641 aa36.49■■■■□ 3.43
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms