RNA–Protein interactions for RNA: ENST00000590494.1

TMC6-215, Transcript of transmembrane channel like 6, humanhuman

TSL 2

Gene TMC6, Length 702 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC6-215ENST00000590494 DENND4BO75064 1496 aaPredicted RBP19.39■□□□□ 0.69
TMC6-215ENST00000590494 ZMYM4Q5VZL5 1548 aa19.39■□□□□ 0.69
TMC6-215ENST00000590494 EFCAB5A4FU69 1503 aa19.37■□□□□ 0.69
TMC6-215ENST00000590494 NCOA1Q15788 1441 aa19.35■□□□□ 0.69
TMC6-215ENST00000590494 ZNF335Q9H4Z2 1342 aaPredicted RBP19.33■□□□□ 0.69
TMC6-215ENST00000590494 MAGI2Q86UL8 1455 aa19.3■□□□□ 0.68
TMC6-215ENST00000590494 CTTNBP2Q8WZ74 1663 aa19.3■□□□□ 0.68
TMC6-215ENST00000590494 ATP10BO94823 1461 aa19.28■□□□□ 0.68
TMC6-215ENST00000590494 SCAF1Q9H7N4 1312 aaKnown RBP19.28■□□□□ 0.68
TMC6-215ENST00000590494 PIP4K2BP78356 416 aa19.25■□□□□ 0.67
TMC6-215ENST00000590494 ARID3CA6NKF2 412 aa19.24■□□□□ 0.67
TMC6-215ENST00000590494 HECW1Q76N89 1606 aa19.24■□□□□ 0.67
TMC6-215ENST00000590494 C3P01024 1663 aa19.23■□□□□ 0.67
TMC6-215ENST00000590494 CFAP74Q9C0B2 1584 aa19.23■□□□□ 0.67
TMC6-215ENST00000590494 GOLGA3Q08378 1498 aa19.22■□□□□ 0.67
TMC6-215ENST00000590494 RGS17Q9UGC6 210 aaPredicted RBP19.21■□□□□ 0.67
TMC6-215ENST00000590494 CAMSAP1Q5T5Y3 1602 aa19.21■□□□□ 0.67
TMC6-215ENST00000590494 ATP10AO60312 1499 aa19.19■□□□□ 0.66
TMC6-215ENST00000590494 C9orf84Q5VXU9 1444 aa19.18■□□□□ 0.66
TMC6-215ENST00000590494 TOM1O60784 492 aa19.17■□□□□ 0.66
TMC6-215ENST00000590494 TRAPPC8Q9Y2L5 1435 aa19.16■□□□□ 0.66
TMC6-215ENST00000590494 NCKAP5LQ9HCH0 1330 aa19.13■□□□□ 0.65
TMC6-215ENST00000590494 EHMT2Q96KQ7 1210 aa19.12■□□□□ 0.65
TMC6-215ENST00000590494 UBTFP17480 764 aaKnown RBP19.11■□□□□ 0.65
TMC6-215ENST00000590494 ALKQ9UM73 1620 aa19.07■□□□□ 0.64
TMC6-215ENST00000590494 SETD1AO15047 1707 aaKnown RBP19.06■□□□□ 0.64
TMC6-215ENST00000590494 SAMD9Q5K651 1589 aa19.04■□□□□ 0.64
TMC6-215ENST00000590494 PLA2R1Q13018 1463 aa19.03■□□□□ 0.64
TMC6-215ENST00000590494 PKD2Q13563 968 aa19.03■□□□□ 0.64
TMC6-215ENST00000590494 POTEAQ6S8J7 498 aa19.03■□□□□ 0.64
TMC6-215ENST00000590494 CPS1P31327 1500 aa19.03■□□□□ 0.64
TMC6-215ENST00000590494 TCOF1Q13428 1488 aaKnown RBP19.03■□□□□ 0.64
TMC6-215ENST00000590494 SCAPERQ9BY12 1400 aa19.01■□□□□ 0.63
TMC6-215ENST00000590494 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.01■□□□□ 0.63
TMC6-215ENST00000590494 PTPRKQ15262 1439 aa19■□□□□ 0.63
TMC6-215ENST00000590494 PPP6R1Q9UPN7 881 aa18.99■□□□□ 0.63
TMC6-215ENST00000590494 SUPT6HQ7KZ85 1726 aaKnown RBP18.99■□□□□ 0.63
TMC6-215ENST00000590494 RAPGEF6Q8TEU7 1601 aa18.99■□□□□ 0.63
TMC6-215ENST00000590494 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP18.98■□□□□ 0.63
TMC6-215ENST00000590494 RANGAP1P46060 587 aaPredicted RBP18.98■□□□□ 0.63
TMC6-215ENST00000590494 HNRNPUL2Q1KMD3 747 aaKnown RBP18.98■□□□□ 0.63
TMC6-215ENST00000590494 ZNF142P52746 1687 aaPredicted RBP18.98■□□□□ 0.63
TMC6-215ENST00000590494 NPATQ14207 1427 aa18.97■□□□□ 0.63
TMC6-215ENST00000590494 SENP3Q9H4L4 574 aaPredicted RBP18.96■□□□□ 0.63
TMC6-215ENST00000590494 REREQ9P2R6 1566 aa18.96■□□□□ 0.63
TMC6-215ENST00000590494 AGLP35573 1532 aa18.95■□□□□ 0.62
TMC6-215ENST00000590494 ESF1Q9H501 851 aaKnown RBP18.94■□□□□ 0.62
TMC6-215ENST00000590494 P3H3Q8IVL6 736 aa18.93■□□□□ 0.62
TMC6-215ENST00000590494 DIP2CQ9Y2E4 1556 aa18.93■□□□□ 0.62
TMC6-215ENST00000590494 CNTLNQ9NXG0 1405 aa18.92■□□□□ 0.62
TMC6-215ENST00000590494 SHANK2Q9UPX8 1470 aa18.92■□□□□ 0.62
TMC6-215ENST00000590494 MYO3AQ8NEV4 1616 aa18.92■□□□□ 0.62
TMC6-215ENST00000590494 NUP153P49790 1475 aaKnown RBP18.9■□□□□ 0.62
TMC6-215ENST00000590494 ARHGAP35Q9NRY4 1499 aa18.9■□□□□ 0.62
TMC6-215ENST00000590494 CEP170BQ9Y4F5 1589 aaPredicted RBP18.89■□□□□ 0.62
TMC6-215ENST00000590494 MROH2AA6NES4 1674 aa18.89■□□□□ 0.61
TMC6-215ENST00000590494 LOC105371045A0A1W2PR82 267 aa18.88■□□□□ 0.61
TMC6-215ENST00000590494 UPF1Q92900 1129 aaKnown RBP eCLIP18.88■□□□□ 0.612e-9■■■■■ 31.8
TMC6-215ENST00000590494 KDM5CP41229 1560 aa18.88■□□□□ 0.61
TMC6-215ENST00000590494 PLEKHD1A6NEE1 506 aa18.87■□□□□ 0.61
TMC6-215ENST00000590494 ABCA6Q8N139 1617 aa18.85■□□□□ 0.61
TMC6-215ENST00000590494 ZNF518AQ6AHZ1 1483 aa18.85■□□□□ 0.61
TMC6-215ENST00000590494 CLIP1P30622 1438 aa18.85■□□□□ 0.61
TMC6-215ENST00000590494 SRCAPQ6ZRS2 3230 aa18.85■□□□□ 0.61
TMC6-215ENST00000590494 PLCH2O75038 1416 aa18.84■□□□□ 0.61
TMC6-215ENST00000590494 POLR1AO95602 1720 aaPredicted RBP18.83■□□□□ 0.6
TMC6-215ENST00000590494 CEP162Q5TB80 1403 aa18.82■□□□□ 0.6
TMC6-215ENST00000590494 VWDEQ8N2E2 1590 aa18.81■□□□□ 0.6
TMC6-215ENST00000590494 NEURL4Q96JN8 1562 aa18.81■□□□□ 0.6
TMC6-215ENST00000590494 FMN1Q68DA7 1419 aa18.8■□□□□ 0.6
TMC6-215ENST00000590494 ZMYM3Q14202 1370 aa18.8■□□□□ 0.6
TMC6-215ENST00000590494 RNF17Q9BXT8 1623 aaKnown RBP18.79■□□□□ 0.6
TMC6-215ENST00000590494 AFAP1Q8N556 730 aa18.77■□□□□ 0.6
TMC6-215ENST00000590494 MYT1LQ9UL68 1186 aa18.75■□□□□ 0.59
TMC6-215ENST00000590494 MYO5CQ9NQX4 1742 aa18.74■□□□□ 0.59
TMC6-215ENST00000590494 DNMT1P26358 1616 aaKnown RBP18.74■□□□□ 0.59
TMC6-215ENST00000590494 MLH3Q9UHC1 1453 aa18.73■□□□□ 0.59
TMC6-215ENST00000590494 EFCAB2Q5VUJ9 269 aa18.73■□□□□ 0.59
TMC6-215ENST00000590494 LRRC7Q96NW7 1537 aa18.7■□□□□ 0.58
TMC6-215ENST00000590494 A2ML1A8K2U0 1454 aa18.7■□□□□ 0.58
TMC6-215ENST00000590494 CLTCQ00610 1675 aaKnown RBP18.69■□□□□ 0.58
TMC6-215ENST00000590494 STRCP1A6NGW2 1772 aa18.69■□□□□ 0.58
TMC6-215ENST00000590494 SYNMO15061 1565 aa18.68■□□□□ 0.58
TMC6-215ENST00000590494 CASKIN1Q8WXD9 1431 aa18.67■□□□□ 0.58
TMC6-215ENST00000590494 FYCO1Q9BQS8 1478 aa18.65■□□□□ 0.58
TMC6-215ENST00000590494 ATP1B4Q9UN42 357 aaPredicted RBP18.64■□□□□ 0.57
TMC6-215ENST00000590494 KIDINS220Q9ULH0 1771 aa18.63■□□□□ 0.57
TMC6-215ENST00000590494 CDK13Q14004 1512 aaKnown RBP18.61■□□□□ 0.57
TMC6-215ENST00000590494 LRRIQ1Q96JM4 1722 aa18.6■□□□□ 0.57
TMC6-215ENST00000590494 ARHGAP5Q13017 1502 aa18.6■□□□□ 0.57
TMC6-215ENST00000590494 CCDC18Q5T9S5 1454 aa18.6■□□□□ 0.57
TMC6-215ENST00000590494 TRIM52Q96A61 297 aa18.6■□□□□ 0.57
TMC6-215ENST00000590494 MED14O60244 1454 aa18.58■□□□□ 0.57
TMC6-215ENST00000590494 VPS8Q8N3P4 1428 aa18.58■□□□□ 0.57
TMC6-215ENST00000590494 NPHP4O75161 1426 aaPredicted RBP18.57■□□□□ 0.56
TMC6-215ENST00000590494 FAM135BQ49AJ0 1406 aa18.57■□□□□ 0.56
TMC6-215ENST00000590494 DEPDC5O75140 1603 aa18.57■□□□□ 0.56
TMC6-215ENST00000590494 IQGAP1P46940 1657 aa18.56■□□□□ 0.56
TMC6-215ENST00000590494 ANKLE2Q86XL3 938 aa18.55■□□□□ 0.56
TMC6-215ENST00000590494 XIRP1Q702N8 1843 aaKnown RBP18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms