RNA–Protein interactions for RNA: ENST00000589455.5

LINC01140-209, Transcript of long intergenic non-protein coding RNA 1140, humanhuman

TSL 2

Gene LINC01140, Length 538 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01140-209ENST00000589455 HECW1Q76N89 1606 aa26.22■■□□□ 1.79
LINC01140-209ENST00000589455 CDK11AQ9UQ88 783 aaPredicted RBP26.22■■□□□ 1.79
LINC01140-209ENST00000589455 ATP10AO60312 1499 aa26.22■■□□□ 1.79
LINC01140-209ENST00000589455 CDK13Q14004 1512 aaKnown RBP26.19■■□□□ 1.78
LINC01140-209ENST00000589455 C9orf84Q5VXU9 1444 aa26.17■■□□□ 1.78
LINC01140-209ENST00000589455 FMN1Q68DA7 1419 aa26.16■■□□□ 1.78
LINC01140-209ENST00000589455 ARHGEF12Q9NZN5 1544 aa26.16■■□□□ 1.78
LINC01140-209ENST00000589455 DMRT2Q9Y5R5 561 aa26.15■■□□□ 1.78
LINC01140-209ENST00000589455 SIGLEC1Q9BZZ2 1709 aa26.14■■□□□ 1.78
LINC01140-209ENST00000589455 ATP1B4Q9UN42 357 aaPredicted RBP26.12■■□□□ 1.77
LINC01140-209ENST00000589455 ZNF518AQ6AHZ1 1483 aa26.1■■□□□ 1.77
LINC01140-209ENST00000589455 FER1L4A9Z1Z3 1794 aa26.08■■□□□ 1.77
LINC01140-209ENST00000589455 UBTFP17480 764 aaKnown RBP26.08■■□□□ 1.77
LINC01140-209ENST00000589455 CEBPAP49715 358 aaPredicted RBP26.07■■□□□ 1.76
LINC01140-209ENST00000589455 AFAP1Q8N556 730 aa26.07■■□□□ 1.76
LINC01140-209ENST00000589455 TROQ12816 1431 aaPredicted RBP26.05■■□□□ 1.76
LINC01140-209ENST00000589455 CLIP1P30622 1438 aa26.02■■□□□ 1.76
LINC01140-209ENST00000589455 UHRF1BP1Q6BDS2 1440 aa26.01■■□□□ 1.75
LINC01140-209ENST00000589455 ARHGAP35Q9NRY4 1499 aa26.01■■□□□ 1.75
LINC01140-209ENST00000589455 KDM5CP41229 1560 aa26■■□□□ 1.75
LINC01140-209ENST00000589455 MYO5CQ9NQX4 1742 aa26■■□□□ 1.75
LINC01140-209ENST00000589455 PREX1Q8TCU6 1659 aa25.99■■□□□ 1.75
LINC01140-209ENST00000589455 MYT1LQ9UL68 1186 aa25.99■■□□□ 1.75
LINC01140-209ENST00000589455 ARHGAP5Q13017 1502 aa25.98■■□□□ 1.75
LINC01140-209ENST00000589455 KIF14Q15058 1648 aa25.98■■□□□ 1.75
LINC01140-209ENST00000589455 MLH3Q9UHC1 1453 aa25.98■■□□□ 1.75
LINC01140-209ENST00000589455 REREQ9P2R6 1566 aa25.96■■□□□ 1.75
LINC01140-209ENST00000589455 ESF1Q9H501 851 aaKnown RBP25.94■■□□□ 1.74
LINC01140-209ENST00000589455 PTPRTO14522 1441 aa25.93■■□□□ 1.74
LINC01140-209ENST00000589455 SETD1BQ9UPS6 1966 aaKnown RBP25.92■■□□□ 1.74
LINC01140-209ENST00000589455 AGLP35573 1532 aa25.91■■□□□ 1.74
LINC01140-209ENST00000589455 DIP2CQ9Y2E4 1556 aa25.9■■□□□ 1.74
LINC01140-209ENST00000589455 EHMT2Q96KQ7 1210 aa25.9■■□□□ 1.74
LINC01140-209ENST00000589455 TRAPPC8Q9Y2L5 1435 aa25.89■■□□□ 1.74
LINC01140-209ENST00000589455 STRCQ7RTU9 1775 aa25.87■■□□□ 1.73
LINC01140-209ENST00000589455 CNTLNQ9NXG0 1405 aa25.86■■□□□ 1.73
LINC01140-209ENST00000589455 DISP3Q9P2K9 1392 aa25.85■■□□□ 1.73
LINC01140-209ENST00000589455 CASKIN1Q8WXD9 1431 aa25.81■■□□□ 1.72
LINC01140-209ENST00000589455 CCDC18Q5T9S5 1454 aa25.81■■□□□ 1.72
LINC01140-209ENST00000589455 ABCC1P33527 1531 aa25.81■■□□□ 1.72
LINC01140-209ENST00000589455 ABCA6Q8N139 1617 aa25.81■■□□□ 1.72
LINC01140-209ENST00000589455 SOCS7O14512 581 aa25.79■■□□□ 1.72
LINC01140-209ENST00000589455 ILDR2Q71H61 639 aa25.78■■□□□ 1.72
LINC01140-209ENST00000589455 CDC42BPBQ9Y5S2 1711 aa25.77■■□□□ 1.72
LINC01140-209ENST00000589455 NCOA1Q15788 1441 aa25.77■■□□□ 1.72
LINC01140-209ENST00000589455 IQSEC2Q5JU85 1478 aa25.77■■□□□ 1.72
LINC01140-209ENST00000589455 C3P01024 1663 aa25.77■■□□□ 1.72
LINC01140-209ENST00000589455 NPATQ14207 1427 aa25.76■■□□□ 1.71
LINC01140-209ENST00000589455 PREX2Q70Z35 1606 aa25.76■■□□□ 1.71
LINC01140-209ENST00000589455 CHIC1Q5VXU3 224 aa25.73■■□□□ 1.71
LINC01140-209ENST00000589455 LTBP4Q8N2S1 1624 aa25.73■■□□□ 1.71
LINC01140-209ENST00000589455 ZMYM3Q14202 1370 aa25.71■■□□□ 1.71
LINC01140-209ENST00000589455 SPAG9O60271 1321 aaKnown RBP25.7■■□□□ 1.71
LINC01140-209ENST00000589455 LRRIQ1Q96JM4 1722 aa25.7■■□□□ 1.7
LINC01140-209ENST00000589455 KIDINS220Q9ULH0 1771 aa25.69■■□□□ 1.7
LINC01140-209ENST00000589455 ITSN2Q9NZM3 1697 aa25.69■■□□□ 1.7
LINC01140-209ENST00000589455 ZNF777Q9ULD5 760 aaPredicted RBP25.68■■□□□ 1.7
LINC01140-209ENST00000589455 KIAA1107Q9UPP5 1409 aa25.66■■□□□ 1.7
LINC01140-209ENST00000589455 SAMD9LQ8IVG5 1584 aa25.65■■□□□ 1.7
LINC01140-209ENST00000589455 FYCO1Q9BQS8 1478 aa25.65■■□□□ 1.7
LINC01140-209ENST00000589455 GPATCH8Q9UKJ3 1502 aaKnown RBP25.64■■□□□ 1.7
LINC01140-209ENST00000589455 HNRNPMP52272 730 aaKnown RBP eCLIP25.64■■□□□ 1.7
LINC01140-209ENST00000589455 PKD2Q13563 968 aa25.64■■□□□ 1.7
LINC01140-209ENST00000589455 PPP6R1Q9UPN7 881 aa25.64■■□□□ 1.7
LINC01140-209ENST00000589455 CAMSAP1Q5T5Y3 1602 aa25.62■■□□□ 1.69
LINC01140-209ENST00000589455 PLEKHH2Q8IVE3 1493 aa25.61■■□□□ 1.69
LINC01140-209ENST00000589455 CFDP1Q9UEE9 299 aaPredicted RBP25.61■■□□□ 1.69
LINC01140-209ENST00000589455 MROH2AA6NES4 1674 aa25.61■■□□□ 1.69
LINC01140-209ENST00000589455 NCKAP5LQ9HCH0 1330 aa25.6■■□□□ 1.69
LINC01140-209ENST00000589455 CDC42BPAQ5VT25 1732 aa25.59■■□□□ 1.69
LINC01140-209ENST00000589455 PLA2R1Q13018 1463 aa25.59■■□□□ 1.69
LINC01140-209ENST00000589455 SYCP2Q9BX26 1530 aa25.58■■□□□ 1.69
LINC01140-209ENST00000589455 SPATA31D1Q6ZQQ2 1576 aa25.58■■□□□ 1.69
LINC01140-209ENST00000589455 A2MP01023 1474 aa25.57■■□□□ 1.68
LINC01140-209ENST00000589455 ZNF335Q9H4Z2 1342 aaPredicted RBP25.56■■□□□ 1.68
LINC01140-209ENST00000589455 PTPRKQ15262 1439 aa25.55■■□□□ 1.68
LINC01140-209ENST00000589455 ATP7AQ04656 1500 aa25.55■■□□□ 1.68
LINC01140-209ENST00000589455 GGT6Q6P531 493 aa25.54■■□□□ 1.68
LINC01140-209ENST00000589455 CCNB3Q8WWL7 1395 aa25.54■■□□□ 1.68
LINC01140-209ENST00000589455 UBAP1LF5GYI3 381 aa25.53■■□□□ 1.68
LINC01140-209ENST00000589455 TCOF1Q13428 1488 aaKnown RBP25.53■■□□□ 1.68
LINC01140-209ENST00000589455 PLXNC1O60486 1568 aa25.52■■□□□ 1.68
LINC01140-209ENST00000589455 INO80Q9ULG1 1556 aaPredicted RBP25.48■■□□□ 1.67
LINC01140-209ENST00000589455 SUPT6HQ7KZ85 1726 aaKnown RBP25.46■■□□□ 1.67
LINC01140-209ENST00000589455 CEP170BQ9Y4F5 1589 aaPredicted RBP25.46■■□□□ 1.67
LINC01140-209ENST00000589455 MTUS2Q5JR59 1369 aa25.45■■□□□ 1.67
LINC01140-209ENST00000589455 ZNF142P52746 1687 aaPredicted RBP25.45■■□□□ 1.66
LINC01140-209ENST00000589455 RTEL1-TNFRSF6BF6WH68 1400 aa25.44■■□□□ 1.66
LINC01140-209ENST00000589455 MYO3AQ8NEV4 1616 aa25.44■■□□□ 1.66
LINC01140-209ENST00000589455 CLTCQ00610 1675 aaKnown RBP25.43■■□□□ 1.66
LINC01140-209ENST00000589455 A2ML1A8K2U0 1454 aa25.41■■□□□ 1.66
LINC01140-209ENST00000589455 DHX29Q7Z478 1369 aaKnown RBP25.41■■□□□ 1.66
LINC01140-209ENST00000589455 MBD5Q9P267 1494 aa25.4■■□□□ 1.66
LINC01140-209ENST00000589455 ZNF644Q9H582 1327 aaPredicted RBP25.39■■□□□ 1.66
LINC01140-209ENST00000589455 RSPH4AQ5TD94 716 aa25.36■■□□□ 1.65
LINC01140-209ENST00000589455 ADGBQ8N7X0 1667 aa25.36■■□□□ 1.65
LINC01140-209ENST00000589455 TOM1O60784 492 aa25.35■■□□□ 1.65
LINC01140-209ENST00000589455 TNRQ92752 1358 aa25.32■■□□□ 1.64
LINC01140-209ENST00000589455 CEP162Q5TB80 1403 aa25.32■■□□□ 1.64
LINC01140-209ENST00000589455 KIF3BO15066 747 aa25.32■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms