RNA–Protein interactions for RNA: ENST00000589266.5

CIRBP-223, Transcript of cold inducible RNA binding protein, humanhuman

TSL 3

Gene CIRBP, Length 616 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-223ENST00000589266 CFAP74Q9C0B2 1584 aa39.33■■■■□ 3.89
CIRBP-223ENST00000589266 PLPPR3Q6T4P5 718 aa39.33■■■■□ 3.89
CIRBP-223ENST00000589266 ATP1B4Q9UN42 357 aaPredicted RBP39.3■■■■□ 3.88
CIRBP-223ENST00000589266 MAP3K1Q13233 1512 aa39.3■■■■□ 3.88
CIRBP-223ENST00000589266 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP39.28■■■■□ 3.88
CIRBP-223ENST00000589266 ZMYM4Q5VZL5 1548 aa39.26■■■■□ 3.88
CIRBP-223ENST00000589266 ZFYVE16Q7Z3T8 1539 aa39.24■■■■□ 3.87
CIRBP-223ENST00000589266 LRRIQ1Q96JM4 1722 aa39.24■■■■□ 3.87
CIRBP-223ENST00000589266 APLP2Q06481 763 aa39.22■■■■□ 3.87
CIRBP-223ENST00000589266 MAGI2Q86UL8 1455 aa39.22■■■■□ 3.87
CIRBP-223ENST00000589266 YEATS2Q9ULM3 1422 aa39.22■■■■□ 3.87
CIRBP-223ENST00000589266 TTC37Q6PGP7 1564 aa39.2■■■■□ 3.87
CIRBP-223ENST00000589266 MLECQ14165 292 aa39.19■■■■□ 3.86
CIRBP-223ENST00000589266 TIAM1Q13009 1591 aa39.17■■■■□ 3.86
CIRBP-223ENST00000589266 CERKQ8TCT0 537 aa39.17■■■■□ 3.86
CIRBP-223ENST00000589266 SIGLEC1Q9BZZ2 1709 aa39.16■■■■□ 3.86
CIRBP-223ENST00000589266 CDK13Q14004 1512 aaKnown RBP39.15■■■■□ 3.86
CIRBP-223ENST00000589266 CDK11AQ9UQ88 783 aaPredicted RBP39.12■■■■□ 3.85
CIRBP-223ENST00000589266 FER1L4A9Z1Z3 1794 aa39.1■■■■□ 3.85
CIRBP-223ENST00000589266 SCAPERQ9BY12 1400 aa39.1■■■■□ 3.85
CIRBP-223ENST00000589266 PLCH2O75038 1416 aa39.06■■■■□ 3.84
CIRBP-223ENST00000589266 ATP10AO60312 1499 aa39.01■■■■□ 3.84
CIRBP-223ENST00000589266 LRRC9Q6ZRR7 1453 aa39■■■■□ 3.83
CIRBP-223ENST00000589266 ARHGEF12Q9NZN5 1544 aa38.98■■■■□ 3.83
CIRBP-223ENST00000589266 EFCAB2Q5VUJ9 269 aa38.97■■■■□ 3.83
CIRBP-223ENST00000589266 TROQ12816 1431 aaPredicted RBP38.97■■■■□ 3.83
CIRBP-223ENST00000589266 EHBP1L1Q8N3D4 1523 aa38.96■■■■□ 3.83
CIRBP-223ENST00000589266 C9orf84Q5VXU9 1444 aa38.96■■■■□ 3.83
CIRBP-223ENST00000589266 MTUS2Q5JR59 1369 aa38.95■■■■□ 3.83
CIRBP-223ENST00000589266 PREX1Q8TCU6 1659 aa38.92■■■■□ 3.82
CIRBP-223ENST00000589266 CEBPAP49715 358 aaPredicted RBP38.9■■■■□ 3.82
CIRBP-223ENST00000589266 KANK4Q5T7N3 995 aaPredicted RBP38.9■■■■□ 3.82
CIRBP-223ENST00000589266 DMRT2Q9Y5R5 561 aa38.89■■■■□ 3.82
CIRBP-223ENST00000589266 MYO5CQ9NQX4 1742 aa38.86■■■■□ 3.81
CIRBP-223ENST00000589266 SETD1BQ9UPS6 1966 aaKnown RBP38.82■■■■□ 3.8
CIRBP-223ENST00000589266 ZNF518AQ6AHZ1 1483 aa38.8■■■■□ 3.8
CIRBP-223ENST00000589266 SUPT6HQ7KZ85 1726 aaKnown RBP38.79■■■■□ 3.8
CIRBP-223ENST00000589266 KIF14Q15058 1648 aa38.78■■■■□ 3.8
CIRBP-223ENST00000589266 AFAP1Q8N556 730 aa38.77■■■■□ 3.8
CIRBP-223ENST00000589266 UHRF1BP1Q6BDS2 1440 aa38.77■■■■□ 3.8
CIRBP-223ENST00000589266 STRCQ7RTU9 1775 aa38.76■■■■□ 3.8
CIRBP-223ENST00000589266 MYT1LQ9UL68 1186 aa38.76■■■■□ 3.8
CIRBP-223ENST00000589266 DISP3Q9P2K9 1392 aa38.73■■■■□ 3.79
CIRBP-223ENST00000589266 ARHGAP5Q13017 1502 aa38.72■■■■□ 3.79
CIRBP-223ENST00000589266 KDM5CP41229 1560 aa38.71■■■■□ 3.79
CIRBP-223ENST00000589266 NCOA2Q15596 1464 aa38.71■■■■□ 3.79
CIRBP-223ENST00000589266 PPARGC1BQ86YN6 1023 aaKnown RBP38.64■■■■□ 3.78
CIRBP-223ENST00000589266 DIP2CQ9Y2E4 1556 aa38.64■■■■□ 3.78
CIRBP-223ENST00000589266 ILDR2Q71H61 639 aa38.63■■■■□ 3.77
CIRBP-223ENST00000589266 REREQ9P2R6 1566 aa38.62■■■■□ 3.77
CIRBP-223ENST00000589266 ESF1Q9H501 851 aaKnown RBP38.62■■■■□ 3.77
CIRBP-223ENST00000589266 PTPRTO14522 1441 aa38.6■■■■□ 3.77
CIRBP-223ENST00000589266 MLH3Q9UHC1 1453 aa38.59■■■■□ 3.77
CIRBP-223ENST00000589266 SOCS7O14512 581 aa38.58■■■■□ 3.77
CIRBP-223ENST00000589266 C3P01024 1663 aa38.56■■■■□ 3.76
CIRBP-223ENST00000589266 CCNB3Q8WWL7 1395 aa38.56■■■■□ 3.76
CIRBP-223ENST00000589266 ABCA6Q8N139 1617 aa38.54■■■■□ 3.76
CIRBP-223ENST00000589266 AGLP35573 1532 aa38.53■■■■□ 3.76
CIRBP-223ENST00000589266 CDC42BPBQ9Y5S2 1711 aa38.52■■■■□ 3.76
CIRBP-223ENST00000589266 TRAPPC8Q9Y2L5 1435 aa38.52■■■■□ 3.76
CIRBP-223ENST00000589266 GPATCH8Q9UKJ3 1502 aaKnown RBP38.51■■■■□ 3.76
CIRBP-223ENST00000589266 ITSN2Q9NZM3 1697 aa38.51■■■■□ 3.76
CIRBP-223ENST00000589266 MYOM3Q5VTT5 1437 aa38.5■■■■□ 3.75
CIRBP-223ENST00000589266 CDC42BPAQ5VT25 1732 aa38.47■■■■□ 3.75
CIRBP-223ENST00000589266 MIA2Q96PC5 1412 aa38.46■■■■□ 3.75
CIRBP-223ENST00000589266 PREX2Q70Z35 1606 aa38.45■■■■□ 3.75
CIRBP-223ENST00000589266 ABCC1P33527 1531 aa38.43■■■■□ 3.74
CIRBP-223ENST00000589266 CNTLNQ9NXG0 1405 aa38.43■■■■□ 3.74
CIRBP-223ENST00000589266 LTBP4Q8N2S1 1624 aa38.41■■■■□ 3.74
CIRBP-223ENST00000589266 SPATA31D1Q6ZQQ2 1576 aa38.39■■■■□ 3.74
CIRBP-223ENST00000589266 NCOA1Q15788 1441 aa38.38■■■■□ 3.74
CIRBP-223ENST00000589266 IQSEC2Q5JU85 1478 aa38.38■■■■□ 3.73
CIRBP-223ENST00000589266 FGD6Q6ZV73 1430 aa38.38■■■■□ 3.73
CIRBP-223ENST00000589266 CFDP1Q9UEE9 299 aaPredicted RBP38.37■■■■□ 3.73
CIRBP-223ENST00000589266 KIDINS220Q9ULH0 1771 aa38.36■■■■□ 3.73
CIRBP-223ENST00000589266 RRBP1Q9P2E9 1410 aaKnown RBP38.34■■■■□ 3.73
CIRBP-223ENST00000589266 NPATQ14207 1427 aa38.29■■■■□ 3.72
CIRBP-223ENST00000589266 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP38.28■■■■□ 3.725e-6■■■□□ 18.7
CIRBP-223ENST00000589266 TCOF1Q13428 1488 aaKnown RBP38.28■■■■□ 3.72
CIRBP-223ENST00000589266 CAMSAP1Q5T5Y3 1602 aa38.26■■■■□ 3.71
CIRBP-223ENST00000589266 PTPN23Q9H3S7 1636 aa38.26■■■■□ 3.71
CIRBP-223ENST00000589266 ZMYM3Q14202 1370 aa38.25■■■■□ 3.71
CIRBP-223ENST00000589266 MROH2AA6NES4 1674 aa38.24■■■■□ 3.71
CIRBP-223ENST00000589266 ZNF777Q9ULD5 760 aaPredicted RBP38.24■■■■□ 3.71
CIRBP-223ENST00000589266 PLEKHH2Q8IVE3 1493 aa38.22■■■■□ 3.71
CIRBP-223ENST00000589266 SAMD9LQ8IVG5 1584 aa38.22■■■■□ 3.71
CIRBP-223ENST00000589266 SPAG9O60271 1321 aaKnown RBP38.19■■■■□ 3.7
CIRBP-223ENST00000589266 NCKAP5LQ9HCH0 1330 aa38.18■■■■□ 3.7
CIRBP-223ENST00000589266 CAMSAP2Q08AD1 1489 aa38.18■■■■□ 3.7
CIRBP-223ENST00000589266 KIAA1107Q9UPP5 1409 aa38.18■■■■□ 3.7
CIRBP-223ENST00000589266 HNRNPMP52272 730 aaKnown RBP eCLIP38.14■■■■□ 3.7
CIRBP-223ENST00000589266 ZNF335Q9H4Z2 1342 aaPredicted RBP38.13■■■■□ 3.7
CIRBP-223ENST00000589266 SYCP2Q9BX26 1530 aa38.12■■■■□ 3.69
CIRBP-223ENST00000589266 UBAP1LF5GYI3 381 aa38.12■■■■□ 3.69
CIRBP-223ENST00000589266 PKD2Q13563 968 aa38.12■■■■□ 3.69
CIRBP-223ENST00000589266 ZNF644Q9H582 1327 aaPredicted RBP38.12■■■■□ 3.69
CIRBP-223ENST00000589266 FAM50AQ14320 339 aaKnown RBP38.09■■■■□ 3.69
CIRBP-223ENST00000589266 TRIM26Q12899 539 aaPredicted RBP38.08■■■■□ 3.69
CIRBP-223ENST00000589266 RSPH4AQ5TD94 716 aa38.08■■■■□ 3.69
CIRBP-223ENST00000589266 PLA2R1Q13018 1463 aa38.07■■■■□ 3.68
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms