RNA–Protein interactions for RNA: ENST00000588781.1

SPIDR-228, Transcript of scaffold protein involved in DNA repair, humanhuman

TSL 5

Gene SPIDR, Length 164 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIDR-228ENST00000588781 CDK13Q14004 1512 aaKnown RBP10.11□□□□□ -0.79
SPIDR-228ENST00000588781 CEP170Q5SW79 1584 aa10.1□□□□□ -0.79
SPIDR-228ENST00000588781 TROQ12816 1431 aaPredicted RBP10.1□□□□□ -0.79
SPIDR-228ENST00000588781 ANP32CO43423 234 aa10.1□□□□□ -0.79
SPIDR-228ENST00000588781 DNMT1P26358 1616 aaKnown RBP10.1□□□□□ -0.79
SPIDR-228ENST00000588781 SHROOM2Q13796 1616 aa10.09□□□□□ -0.79
SPIDR-228ENST00000588781 TRIM52Q96A61 297 aa10.09□□□□□ -0.79
SPIDR-228ENST00000588781 NUP153P49790 1475 aaKnown RBP10.09□□□□□ -0.79
SPIDR-228ENST00000588781 DAPK1P53355 1430 aa10.08□□□□□ -0.8
SPIDR-228ENST00000588781 NUP160Q12769 1436 aa10.07□□□□□ -0.8
SPIDR-228ENST00000588781 ADCY10Q96PN6 1610 aa10.07□□□□□ -0.8
SPIDR-228ENST00000588781 ABCC10Q5T3U5 1492 aa10.07□□□□□ -0.8
SPIDR-228ENST00000588781 DDX10Q13206 875 aaKnown RBP10.06□□□□□ -0.8
SPIDR-228ENST00000588781 RRP7BPQ9NSQ0 103 aa10.06□□□□□ -0.8
SPIDR-228ENST00000588781 KDM6BO15054 1643 aa10.06□□□□□ -0.8
SPIDR-228ENST00000588781 ADGBQ8N7X0 1667 aa10.05□□□□□ -0.8
SPIDR-228ENST00000588781 MPHOSPH9Q99550 1183 aa10.04□□□□□ -0.8
SPIDR-228ENST00000588781 CHIC2Q9UKJ5 165 aa10.04□□□□□ -0.8
SPIDR-228ENST00000588781 ABCC5O15440 1437 aa10.04□□□□□ -0.8
SPIDR-228ENST00000588781 DIP2BQ9P265 1576 aa10.04□□□□□ -0.8
SPIDR-228ENST00000588781 FAM69CQ0P6D2 419 aa10.03□□□□□ -0.8
SPIDR-228ENST00000588781 ADGRL2O95490 1459 aa10.03□□□□□ -0.8
SPIDR-228ENST00000588781 ANKRD30AQ9BXX3 1397 aa10.02□□□□□ -0.8
SPIDR-228ENST00000588781 EIF4G2P78344 907 aaKnown RBP eCLIP10.02□□□□□ -0.816e-6■■■■□ 25.1
SPIDR-228ENST00000588781 JPH4Q96JJ6 628 aa10.02□□□□□ -0.81
SPIDR-228ENST00000588781 CFDP1Q9UEE9 299 aaPredicted RBP10.02□□□□□ -0.81
SPIDR-228ENST00000588781 CAMSAP2Q08AD1 1489 aa10.02□□□□□ -0.81
SPIDR-228ENST00000588781 KIF14Q15058 1648 aa10.01□□□□□ -0.81
SPIDR-228ENST00000588781 PLEKHD1A6NEE1 506 aa10.01□□□□□ -0.81
SPIDR-228ENST00000588781 SHANK2Q9UPX8 1470 aa10.01□□□□□ -0.81
SPIDR-228ENST00000588781 RPRD2Q5VT52 1461 aaKnown RBP10□□□□□ -0.81
SPIDR-228ENST00000588781 ABCA8O94911 1581 aa10□□□□□ -0.81
SPIDR-228ENST00000588781 HECW2Q9P2P5 1572 aa10□□□□□ -0.81
SPIDR-228ENST00000588781 GPATCH8Q9UKJ3 1502 aaKnown RBP9.99□□□□□ -0.81
SPIDR-228ENST00000588781 MYT1Q01538 1121 aa9.99□□□□□ -0.81
SPIDR-228ENST00000588781 CROCC2H7BZ55 1655 aa9.99□□□□□ -0.81
SPIDR-228ENST00000588781 ANKRD30BQ9BXX2 1392 aa9.99□□□□□ -0.81
SPIDR-228ENST00000588781 KDM5BQ9UGL1 1544 aa9.98□□□□□ -0.81
SPIDR-228ENST00000588781 TSPOAP1O95153 1857 aa9.98□□□□□ -0.81
SPIDR-228ENST00000588781 NEFLP07196 543 aa9.98□□□□□ -0.81
SPIDR-228ENST00000588781 RSPH4AQ5TD94 716 aa9.98□□□□□ -0.81
SPIDR-228ENST00000588781 SLC4A1APQ9BWU0 796 aaKnown RBP9.98□□□□□ -0.81
SPIDR-228ENST00000588781 PRG4Q92954 1404 aaPredicted RBP9.98□□□□□ -0.81
SPIDR-228ENST00000588781 PLB1Q6P1J6 1458 aa9.98□□□□□ -0.81
SPIDR-228ENST00000588781 NCOA1Q15788 1441 aa9.97□□□□□ -0.81
SPIDR-228ENST00000588781 ADGRL1O94910 1474 aa9.97□□□□□ -0.81
SPIDR-228ENST00000588781 ARID3CA6NKF2 412 aa9.96□□□□□ -0.82
SPIDR-228ENST00000588781 KIAA1107Q9UPP5 1409 aa9.96□□□□□ -0.82
SPIDR-228ENST00000588781 TSPY4P0CV99 314 aa9.95□□□□□ -0.82
SPIDR-228ENST00000588781 TSPY10P0CW01 314 aa9.95□□□□□ -0.82
SPIDR-228ENST00000588781 HSPA5P11021 654 aaKnown RBP9.95□□□□□ -0.82
SPIDR-228ENST00000588781 FBXO41Q8TF61 875 aa9.95□□□□□ -0.82
SPIDR-228ENST00000588781 DENND4BO75064 1496 aaPredicted RBP9.95□□□□□ -0.82
SPIDR-228ENST00000588781 ARHGEF5Q12774 1597 aa9.95□□□□□ -0.82
SPIDR-228ENST00000588781 PTPRGP23470 1445 aa9.94□□□□□ -0.82
SPIDR-228ENST00000588781 CNTLNQ9NXG0 1405 aa9.94□□□□□ -0.82
SPIDR-228ENST00000588781 NPM1P06748 294 aaKnown RBP eCLIP9.94□□□□□ -0.82
SPIDR-228ENST00000588781 L3MBTL2Q969R5 705 aa9.94□□□□□ -0.82
SPIDR-228ENST00000588781 SUPT16HQ9Y5B9 1047 aaKnown RBP9.94□□□□□ -0.82
SPIDR-228ENST00000588781 ATP10BO94823 1461 aa9.93□□□□□ -0.82
SPIDR-228ENST00000588781 TEX14Q8IWB6 1497 aa9.93□□□□□ -0.82
SPIDR-228ENST00000588781 KDM5DQ9BY66 1539 aa9.92□□□□□ -0.82
SPIDR-228ENST00000588781 C9orf84Q5VXU9 1444 aa9.92□□□□□ -0.82
SPIDR-228ENST00000588781 ANKRD50Q9ULJ7 1429 aa9.92□□□□□ -0.82
SPIDR-228ENST00000588781 ARID4BQ4LE39 1312 aaPredicted RBP9.92□□□□□ -0.82
SPIDR-228ENST00000588781 PZPP20742 1482 aa9.91□□□□□ -0.82
SPIDR-228ENST00000588781 PLEKHH2Q8IVE3 1493 aa9.91□□□□□ -0.82
SPIDR-228ENST00000588781 CDC42BPAQ5VT25 1732 aa9.91□□□□□ -0.82
SPIDR-228ENST00000588781 ZNF644Q9H582 1327 aaPredicted RBP9.91□□□□□ -0.82
SPIDR-228ENST00000588781 ZNF777Q9ULD5 760 aaPredicted RBP9.91□□□□□ -0.82
SPIDR-228ENST00000588781 HIRIP3Q9BW71 556 aaPredicted RBP9.9□□□□□ -0.82
SPIDR-228ENST00000588781 ARHGEF12Q9NZN5 1544 aa9.9□□□□□ -0.82
SPIDR-228ENST00000588781 POLR1AO95602 1720 aaPredicted RBP9.9□□□□□ -0.83
SPIDR-228ENST00000588781 PPRC1Q5VV67 1664 aaKnown RBP9.9□□□□□ -0.83
SPIDR-228ENST00000588781 CCDC7Q96M83 1385 aa9.89□□□□□ -0.83
SPIDR-228ENST00000588781 CCDC141Q6ZP82 1450 aa9.89□□□□□ -0.83
SPIDR-228ENST00000588781 ROCK2O75116 1388 aaKnown RBP9.88□□□□□ -0.83
SPIDR-228ENST00000588781 WASHC2AQ641Q2 1341 aa9.88□□□□□ -0.83
SPIDR-228ENST00000588781 PREX2Q70Z35 1606 aa9.88□□□□□ -0.83
SPIDR-228ENST00000588781 MBD5Q9P267 1494 aa9.87□□□□□ -0.83
SPIDR-228ENST00000588781 PKD2Q13563 968 aa9.87□□□□□ -0.83
SPIDR-228ENST00000588781 UHRF1BP1Q6BDS2 1440 aa9.87□□□□□ -0.83
SPIDR-228ENST00000588781 MAST1Q9Y2H9 1570 aa9.87□□□□□ -0.83
SPIDR-228ENST00000588781 NUP155O75694 1391 aa9.87□□□□□ -0.83
SPIDR-228ENST00000588781 KIF15Q9NS87 1388 aa9.87□□□□□ -0.83
SPIDR-228ENST00000588781 ERICH6BQ5W0A0 696 aa9.86□□□□□ -0.83
SPIDR-228ENST00000588781 KCNH8Q96L42 1107 aa9.86□□□□□ -0.83
SPIDR-228ENST00000588781 GLI2P10070 1586 aa9.85□□□□□ -0.83
SPIDR-228ENST00000588781 SPATA31E1Q6ZUB1 1445 aa9.85□□□□□ -0.83
SPIDR-228ENST00000588781 FOXD1Q16676 465 aa9.85□□□□□ -0.83
SPIDR-228ENST00000588781 RALGAPBQ86X10 1494 aa9.85□□□□□ -0.83
SPIDR-228ENST00000588781 ABCC2Q92887 1545 aa9.84□□□□□ -0.83
SPIDR-228ENST00000588781 COL17A1Q9UMD9 1497 aaPredicted RBP9.84□□□□□ -0.83
SPIDR-228ENST00000588781 NBPF8Q3BBV2 869 aa9.83□□□□□ -0.84
SPIDR-228ENST00000588781 HNRNPUQ00839 825 aaKnown RBP eCLIP9.82□□□□□ -0.84
SPIDR-228ENST00000588781 FKBP8Q14318 412 aa9.82□□□□□ -0.84
SPIDR-228ENST00000588781 KTN1Q86UP2 1357 aaKnown RBP9.82□□□□□ -0.84
SPIDR-228ENST00000588781 USP47Q96K76 1375 aa9.82□□□□□ -0.84
SPIDR-228ENST00000588781 UHRF1BP1LA0JNW5 1464 aa9.82□□□□□ -0.84
SPIDR-228ENST00000588781 ARHGAP5Q13017 1502 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms