RNA–Protein interactions for RNA: ENST00000588580.6

SUGP1-208, Transcript of SURP and G-patch domain containing 1, humanhuman

TSL 2

Gene SUGP1, Length 715 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUGP1-208ENST00000588580 ARHGEF40Q8TER5 1519 aa25.18■■□□□ 1.62
SUGP1-208ENST00000588580 CCDC18Q5T9S5 1454 aa25.16■■□□□ 1.62
SUGP1-208ENST00000588580 MLECQ14165 292 aa25.16■■□□□ 1.62
SUGP1-208ENST00000588580 POGZQ7Z3K3 1410 aa25.15■■□□□ 1.62
SUGP1-208ENST00000588580 AKNAQ7Z591 1439 aa25.15■■□□□ 1.62
SUGP1-208ENST00000588580 RICTORQ6R327 1708 aa25.13■■□□□ 1.61
SUGP1-208ENST00000588580 FANCAO15360 1455 aa25.11■■□□□ 1.61
SUGP1-208ENST00000588580 YEATS2Q9ULM3 1422 aa25.11■■□□□ 1.61
SUGP1-208ENST00000588580 SIGLEC1Q9BZZ2 1709 aa25.1■■□□□ 1.61
SUGP1-208ENST00000588580 PLEKHD1A6NEE1 506 aa25.1■■□□□ 1.61
SUGP1-208ENST00000588580 TIAM1Q13009 1591 aa25.06■■□□□ 1.6
SUGP1-208ENST00000588580 ATP1B4Q9UN42 357 aaPredicted RBP25.05■■□□□ 1.6
SUGP1-208ENST00000588580 MAP3K1Q13233 1512 aa25.03■■□□□ 1.6
SUGP1-208ENST00000588580 ZFYVE16Q7Z3T8 1539 aa25.03■■□□□ 1.6
SUGP1-208ENST00000588580 CEBPAP49715 358 aaPredicted RBP25.03■■□□□ 1.6
SUGP1-208ENST00000588580 ZMYM4Q5VZL5 1548 aa25.02■■□□□ 1.6
SUGP1-208ENST00000588580 DMRT2Q9Y5R5 561 aa25.01■■□□□ 1.59
SUGP1-208ENST00000588580 MAGI2Q86UL8 1455 aa25■■□□□ 1.59
SUGP1-208ENST00000588580 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP25■■□□□ 1.59
SUGP1-208ENST00000588580 FER1L4A9Z1Z3 1794 aa24.99■■□□□ 1.59
SUGP1-208ENST00000588580 TTC37Q6PGP7 1564 aa24.99■■□□□ 1.59
SUGP1-208ENST00000588580 TROQ12816 1431 aaPredicted RBP24.97■■□□□ 1.59
SUGP1-208ENST00000588580 KIF14Q15058 1648 aa24.97■■□□□ 1.59
SUGP1-208ENST00000588580 CFAP74Q9C0B2 1584 aa24.97■■□□□ 1.59
SUGP1-208ENST00000588580 EHBP1L1Q8N3D4 1523 aa24.95■■□□□ 1.58
SUGP1-208ENST00000588580 STRCQ7RTU9 1775 aa24.95■■□□□ 1.58
SUGP1-208ENST00000588580 SCAPERQ9BY12 1400 aa24.94■■□□□ 1.58
SUGP1-208ENST00000588580 ARHGEF12Q9NZN5 1544 aa24.93■■□□□ 1.58
SUGP1-208ENST00000588580 PREX1Q8TCU6 1659 aa24.91■■□□□ 1.58
SUGP1-208ENST00000588580 ATP10AO60312 1499 aa24.91■■□□□ 1.58
SUGP1-208ENST00000588580 LRRC9Q6ZRR7 1453 aa24.9■■□□□ 1.58
SUGP1-208ENST00000588580 CDK11AQ9UQ88 783 aaPredicted RBP24.89■■□□□ 1.58
SUGP1-208ENST00000588580 SPATA31D1Q6ZQQ2 1576 aa24.88■■□□□ 1.57
SUGP1-208ENST00000588580 PLCH2O75038 1416 aa24.86■■□□□ 1.57
SUGP1-208ENST00000588580 C9orf84Q5VXU9 1444 aa24.86■■□□□ 1.57
SUGP1-208ENST00000588580 MTUS2Q5JR59 1369 aa24.85■■□□□ 1.57
SUGP1-208ENST00000588580 SETD1BQ9UPS6 1966 aaKnown RBP24.85■■□□□ 1.57
SUGP1-208ENST00000588580 UHRF1BP1Q6BDS2 1440 aa24.85■■□□□ 1.57
SUGP1-208ENST00000588580 SUPT6HQ7KZ85 1726 aaKnown RBP24.83■■□□□ 1.57
SUGP1-208ENST00000588580 PTPRTO14522 1441 aa24.82■■□□□ 1.56
SUGP1-208ENST00000588580 MYO5CQ9NQX4 1742 aa24.81■■□□□ 1.56
SUGP1-208ENST00000588580 KANK4Q5T7N3 995 aaPredicted RBP24.81■■□□□ 1.56
SUGP1-208ENST00000588580 CDC42BPAQ5VT25 1732 aa24.81■■□□□ 1.56
SUGP1-208ENST00000588580 EFCAB2Q5VUJ9 269 aa24.8■■□□□ 1.56
SUGP1-208ENST00000588580 PREX2Q70Z35 1606 aa24.78■■□□□ 1.56
SUGP1-208ENST00000588580 NCOA2Q15596 1464 aa24.77■■□□□ 1.56
SUGP1-208ENST00000588580 LTBP4Q8N2S1 1624 aa24.76■■□□□ 1.55
SUGP1-208ENST00000588580 AFAP1Q8N556 730 aa24.76■■□□□ 1.55
SUGP1-208ENST00000588580 CDC42BPBQ9Y5S2 1711 aa24.75■■□□□ 1.55
SUGP1-208ENST00000588580 APLP2Q06481 763 aa24.75■■□□□ 1.55
SUGP1-208ENST00000588580 MYT1LQ9UL68 1186 aa24.72■■□□□ 1.55
SUGP1-208ENST00000588580 ITSN2Q9NZM3 1697 aa24.72■■□□□ 1.55
SUGP1-208ENST00000588580 GPATCH8Q9UKJ3 1502 aaKnown RBP24.7■■□□□ 1.54
SUGP1-208ENST00000588580 IQSEC2Q5JU85 1478 aa24.68■■□□□ 1.54
SUGP1-208ENST00000588580 ZNF518AQ6AHZ1 1483 aa24.67■■□□□ 1.54
SUGP1-208ENST00000588580 TRAPPC8Q9Y2L5 1435 aa24.66■■□□□ 1.54
SUGP1-208ENST00000588580 ESF1Q9H501 851 aaKnown RBP24.65■■□□□ 1.54
SUGP1-208ENST00000588580 C3P01024 1663 aa24.65■■□□□ 1.54
SUGP1-208ENST00000588580 NCOA1Q15788 1441 aa24.63■■□□□ 1.53
SUGP1-208ENST00000588580 ARHGAP5Q13017 1502 aa24.63■■□□□ 1.53
SUGP1-208ENST00000588580 CCNB3Q8WWL7 1395 aa24.63■■□□□ 1.53
SUGP1-208ENST00000588580 KDM5CP41229 1560 aa24.62■■□□□ 1.53
SUGP1-208ENST00000588580 UBAP1LF5GYI3 381 aa24.61■■□□□ 1.53
SUGP1-208ENST00000588580 DIP2CQ9Y2E4 1556 aa24.61■■□□□ 1.53
SUGP1-208ENST00000588580 SAMD9LQ8IVG5 1584 aa24.59■■□□□ 1.53
SUGP1-208ENST00000588580 MYOM3Q5VTT5 1437 aa24.59■■□□□ 1.53
SUGP1-208ENST00000588580 REREQ9P2R6 1566 aa24.58■■□□□ 1.52
SUGP1-208ENST00000588580 ZNF335Q9H4Z2 1342 aaPredicted RBP24.58■■□□□ 1.52
SUGP1-208ENST00000588580 NCKAP5LQ9HCH0 1330 aa24.58■■□□□ 1.52
SUGP1-208ENST00000588580 ABCC1P33527 1531 aa24.56■■□□□ 1.52
SUGP1-208ENST00000588580 MLH3Q9UHC1 1453 aa24.55■■□□□ 1.52
SUGP1-208ENST00000588580 AGLP35573 1532 aa24.54■■□□□ 1.52
SUGP1-208ENST00000588580 ABCA6Q8N139 1617 aa24.53■■□□□ 1.52
SUGP1-208ENST00000588580 PPARGC1BQ86YN6 1023 aaKnown RBP24.53■■□□□ 1.52
SUGP1-208ENST00000588580 CAMSAP1Q5T5Y3 1602 aa24.53■■□□□ 1.52
SUGP1-208ENST00000588580 MIA2Q96PC5 1412 aa24.52■■□□□ 1.52
SUGP1-208ENST00000588580 FGD6Q6ZV73 1430 aa24.51■■□□□ 1.51
SUGP1-208ENST00000588580 CNTLNQ9NXG0 1405 aa24.49■■□□□ 1.51
SUGP1-208ENST00000588580 CAMSAP2Q08AD1 1489 aa24.49■■□□□ 1.51
SUGP1-208ENST00000588580 PTPN23Q9H3S7 1636 aa24.49■■□□□ 1.51
SUGP1-208ENST00000588580 SYCP2Q9BX26 1530 aa24.48■■□□□ 1.51
SUGP1-208ENST00000588580 CFDP1Q9UEE9 299 aaPredicted RBP24.48■■□□□ 1.51
SUGP1-208ENST00000588580 ZMYM3Q14202 1370 aa24.47■■□□□ 1.51
SUGP1-208ENST00000588580 TCOF1Q13428 1488 aaKnown RBP24.46■■□□□ 1.51
SUGP1-208ENST00000588580 PLEKHH2Q8IVE3 1493 aa24.45■■□□□ 1.51
SUGP1-208ENST00000588580 NPATQ14207 1427 aa24.44■■□□□ 1.5
SUGP1-208ENST00000588580 KIAA1107Q9UPP5 1409 aa24.44■■□□□ 1.5
SUGP1-208ENST00000588580 ZNF644Q9H582 1327 aaPredicted RBP24.43■■□□□ 1.5
SUGP1-208ENST00000588580 PKD2Q13563 968 aa24.43■■□□□ 1.5
SUGP1-208ENST00000588580 MBD5Q9P267 1494 aa24.42■■□□□ 1.5
SUGP1-208ENST00000588580 ARHGEF5Q12774 1597 aa24.42■■□□□ 1.5
SUGP1-208ENST00000588580 HSPA1LP34931 641 aa24.41■■□□□ 1.5
SUGP1-208ENST00000588580 KIDINS220Q9ULH0 1771 aa24.4■■□□□ 1.5
SUGP1-208ENST00000588580 RRBP1Q9P2E9 1410 aaKnown RBP24.38■■□□□ 1.49
SUGP1-208ENST00000588580 ZNF777Q9ULD5 760 aaPredicted RBP24.38■■□□□ 1.49
SUGP1-208ENST00000588580 CROCC2H7BZ55 1655 aa24.37■■□□□ 1.49
SUGP1-208ENST00000588580 DNMT1P26358 1616 aaKnown RBP24.36■■□□□ 1.49
SUGP1-208ENST00000588580 PIP4K2BP78356 416 aa24.36■■□□□ 1.49
SUGP1-208ENST00000588580 SCAF1Q9H7N4 1312 aaKnown RBP24.35■■□□□ 1.49
SUGP1-208ENST00000588580 MROH2AA6NES4 1674 aa24.35■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms