RNA–Protein interactions for RNA: ENST00000588408.5

CNTD1-204, Transcript of cyclin N-terminal domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNTD1, Length 2,369 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNTD1-204ENST00000588408 ABCC5O15440 1437 aa19.84■□□□□ 0.77
CNTD1-204ENST00000588408 KDM5BQ9UGL1 1544 aa19.83■□□□□ 0.77
CNTD1-204ENST00000588408 FOXD1Q16676 465 aa19.83■□□□□ 0.77
CNTD1-204ENST00000588408 AKNAQ7Z591 1439 aa19.82■□□□□ 0.76
CNTD1-204ENST00000588408 DNMT1P26358 1616 aaKnown RBP19.82■□□□□ 0.76
CNTD1-204ENST00000588408 CDK11AQ9UQ88 783 aaPredicted RBP19.81■□□□□ 0.76
CNTD1-204ENST00000588408 TROQ12816 1431 aaPredicted RBP19.81■□□□□ 0.76
CNTD1-204ENST00000588408 CARMIL2Q6F5E8 1435 aa19.8■□□□□ 0.76
CNTD1-204ENST00000588408 MPHOSPH9Q99550 1183 aa19.79■□□□□ 0.76
CNTD1-204ENST00000588408 ZNF777Q9ULD5 760 aaPredicted RBP19.76■□□□□ 0.75
CNTD1-204ENST00000588408 CAMSAP2Q08AD1 1489 aa19.76■□□□□ 0.75
CNTD1-204ENST00000588408 GPATCH8Q9UKJ3 1502 aaKnown RBP19.76■□□□□ 0.75
CNTD1-204ENST00000588408 CFDP1Q9UEE9 299 aaPredicted RBP19.75■□□□□ 0.75
CNTD1-204ENST00000588408 ABCA8O94911 1581 aa19.74■□□□□ 0.75
CNTD1-204ENST00000588408 ADCY10Q96PN6 1610 aa19.74■□□□□ 0.75
CNTD1-204ENST00000588408 ROCK1Q13464 1354 aa19.73■□□□□ 0.75
CNTD1-204ENST00000588408 ITSN2Q9NZM3 1697 aa19.72■□□□□ 0.75
CNTD1-204ENST00000588408 ATP10BO94823 1461 aa19.71■□□□□ 0.75
CNTD1-204ENST00000588408 CHD1O14646 1710 aa19.7■□□□□ 0.74
CNTD1-204ENST00000588408 CDC42BPAQ5VT25 1732 aa19.69■□□□□ 0.74
CNTD1-204ENST00000588408 PLEKHD1A6NEE1 506 aa19.65■□□□□ 0.74
CNTD1-204ENST00000588408 L3MBTL2Q969R5 705 aa19.65■□□□□ 0.74
CNTD1-204ENST00000588408 CROCC2H7BZ55 1655 aa19.65■□□□□ 0.74
CNTD1-204ENST00000588408 ADGBQ8N7X0 1667 aa19.65■□□□□ 0.74
CNTD1-204ENST00000588408 NCOA1Q15788 1441 aa19.65■□□□□ 0.74
CNTD1-204ENST00000588408 ANKRD30BQ9BXX2 1392 aa19.64■□□□□ 0.74
CNTD1-204ENST00000588408 ABCC10Q5T3U5 1492 aa19.64■□□□□ 0.73
CNTD1-204ENST00000588408 SLC4A1APQ9BWU0 796 aaKnown RBP19.64■□□□□ 0.73
CNTD1-204ENST00000588408 PTPRGP23470 1445 aa19.62■□□□□ 0.73
CNTD1-204ENST00000588408 PZPP20742 1482 aa19.61■□□□□ 0.73
CNTD1-204ENST00000588408 HSPA5P11021 654 aaKnown RBP19.6■□□□□ 0.73
CNTD1-204ENST00000588408 RPRD2Q5VT52 1461 aaKnown RBP19.58■□□□□ 0.73
CNTD1-204ENST00000588408 ERCC6L2Q5T890 1561 aa19.58■□□□□ 0.72
CNTD1-204ENST00000588408 ADGRL2O95490 1459 aa19.57■□□□□ 0.72
CNTD1-204ENST00000588408 NBPF8Q3BBV2 869 aa19.57■□□□□ 0.72
CNTD1-204ENST00000588408 TEX14Q8IWB6 1497 aa19.56■□□□□ 0.72
CNTD1-204ENST00000588408 WASHC2AQ641Q2 1341 aa19.54■□□□□ 0.72
CNTD1-204ENST00000588408 ANP32CO43423 234 aa19.54■□□□□ 0.72
CNTD1-204ENST00000588408 HNRNPMP52272 730 aaKnown RBP eCLIP19.54■□□□□ 0.72
CNTD1-204ENST00000588408 ANKRD30AQ9BXX3 1397 aa19.53■□□□□ 0.72
CNTD1-204ENST00000588408 SHROOM2Q13796 1616 aa19.52■□□□□ 0.72
CNTD1-204ENST00000588408 C9orf84Q5VXU9 1444 aa19.52■□□□□ 0.71
CNTD1-204ENST00000588408 CDC42BPBQ9Y5S2 1711 aa19.51■□□□□ 0.71
CNTD1-204ENST00000588408 ANKRD50Q9ULJ7 1429 aa19.51■□□□□ 0.71
CNTD1-204ENST00000588408 C11orf95C9JLR9 678 aaPredicted RBP19.5■□□□□ 0.71
CNTD1-204ENST00000588408 EIF4G2P78344 907 aaKnown RBP eCLIP19.5■□□□□ 0.71
CNTD1-204ENST00000588408 PKD2Q13563 968 aa19.49■□□□□ 0.71
CNTD1-204ENST00000588408 SAMD9LQ8IVG5 1584 aa19.48■□□□□ 0.71
CNTD1-204ENST00000588408 KIAA1107Q9UPP5 1409 aa19.47■□□□□ 0.71
CNTD1-204ENST00000588408 CCER2I3L3R5 266 aa19.47■□□□□ 0.71
CNTD1-204ENST00000588408 MBD5Q9P267 1494 aa19.46■□□□□ 0.71
CNTD1-204ENST00000588408 SHANK2Q9UPX8 1470 aa19.46■□□□□ 0.71
CNTD1-204ENST00000588408 TTC37Q6PGP7 1564 aa19.45■□□□□ 0.7
CNTD1-204ENST00000588408 PREX2Q70Z35 1606 aa19.45■□□□□ 0.7
CNTD1-204ENST00000588408 SUPT16HQ9Y5B9 1047 aaKnown RBP19.44■□□□□ 0.7
CNTD1-204ENST00000588408 NUP155O75694 1391 aa19.44■□□□□ 0.7
CNTD1-204ENST00000588408 TSPY4P0CV99 314 aa19.44■□□□□ 0.7
CNTD1-204ENST00000588408 TSPY10P0CW01 314 aa19.44■□□□□ 0.7
CNTD1-204ENST00000588408 KIF15Q9NS87 1388 aa19.42■□□□□ 0.7
CNTD1-204ENST00000588408 ARHGEF5Q12774 1597 aa19.42■□□□□ 0.7
CNTD1-204ENST00000588408 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP19.4■□□□□ 0.7
CNTD1-204ENST00000588408 ZNF326Q5BKZ1 582 aaKnown RBP19.4■□□□□ 0.7
CNTD1-204ENST00000588408 ABCC2Q92887 1545 aa19.39■□□□□ 0.69
CNTD1-204ENST00000588408 SYCP2Q9BX26 1530 aa19.39■□□□□ 0.69
CNTD1-204ENST00000588408 CCDC7Q96M83 1385 aa19.38■□□□□ 0.69
CNTD1-204ENST00000588408 CCDC141Q6ZP82 1450 aa19.38■□□□□ 0.69
CNTD1-204ENST00000588408 SPATA31E1Q6ZUB1 1445 aa19.38■□□□□ 0.69
CNTD1-204ENST00000588408 ARHGAP5Q13017 1502 aa19.37■□□□□ 0.69
CNTD1-204ENST00000588408 CNTLNQ9NXG0 1405 aa19.35■□□□□ 0.69
CNTD1-204ENST00000588408 CLASP1Q7Z460 1538 aa19.34■□□□□ 0.69
CNTD1-204ENST00000588408 KDM5DQ9BY66 1539 aa19.34■□□□□ 0.69
CNTD1-204ENST00000588408 CCDC184Q52MB2 194 aa19.33■□□□□ 0.69
CNTD1-204ENST00000588408 KIF7Q2M1P5 1343 aa19.33■□□□□ 0.69
CNTD1-204ENST00000588408 MYO5CQ9NQX4 1742 aa19.33■□□□□ 0.68
CNTD1-204ENST00000588408 ZCCHC11Q5TAX3 1644 aaKnown RBP19.32■□□□□ 0.68
CNTD1-204ENST00000588408 POLR1AO95602 1720 aaPredicted RBP19.3■□□□□ 0.68
CNTD1-204ENST00000588408 BCORL1Q5H9F3 1711 aa19.3■□□□□ 0.68
CNTD1-204ENST00000588408 ARHGEF12Q9NZN5 1544 aa19.3■□□□□ 0.68
CNTD1-204ENST00000588408 FAM135AQ9P2D6 1515 aa19.28■□□□□ 0.68
CNTD1-204ENST00000588408 KDM2AQ9Y2K7 1162 aa19.28■□□□□ 0.68
CNTD1-204ENST00000588408 USP47Q96K76 1375 aa19.27■□□□□ 0.68
CNTD1-204ENST00000588408 GRWD1Q9BQ67 446 aaKnown RBP eCLIP19.26■□□□□ 0.67
CNTD1-204ENST00000588408 KDM5CP41229 1560 aa19.25■□□□□ 0.67
CNTD1-204ENST00000588408 RSPH4AQ5TD94 716 aa19.25■□□□□ 0.67
CNTD1-204ENST00000588408 BCANQ96GW7 911 aa19.25■□□□□ 0.67
CNTD1-204ENST00000588408 MAST1Q9Y2H9 1570 aa19.24■□□□□ 0.67
CNTD1-204ENST00000588408 PRKRIP1Q9H875 184 aaPredicted RBP19.24■□□□□ 0.67
CNTD1-204ENST00000588408 POLR3GLQ9BT43 218 aa19.24■□□□□ 0.67
CNTD1-204ENST00000588408 PLEKHH2Q8IVE3 1493 aa19.23■□□□□ 0.67
CNTD1-204ENST00000588408 HNRNPUQ00839 825 aaKnown RBP eCLIP19.22■□□□□ 0.67
CNTD1-204ENST00000588408 FKBP8Q14318 412 aa19.22■□□□□ 0.67
CNTD1-204ENST00000588408 DCAF11Q8TEB1 546 aa19.22■□□□□ 0.67
CNTD1-204ENST00000588408 CNGB1Q14028 1251 aaPredicted RBP19.22■□□□□ 0.67
CNTD1-204ENST00000588408 UHRF1BP1Q6BDS2 1440 aa19.22■□□□□ 0.67
CNTD1-204ENST00000588408 UNC13BO14795 1591 aa19.2■□□□□ 0.66
CNTD1-204ENST00000588408 PLCH2O75038 1416 aa19.2■□□□□ 0.66
CNTD1-204ENST00000588408 UHRF1BP1LA0JNW5 1464 aa19.2■□□□□ 0.66
CNTD1-204ENST00000588408 RALGAPBQ86X10 1494 aa19.2■□□□□ 0.66
CNTD1-204ENST00000588408 PLXNC1O60486 1568 aa19.19■□□□□ 0.66
CNTD1-204ENST00000588408 PLA2R1Q13018 1463 aa19.19■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms