RNA–Protein interactions for RNA: ENST00000588087.5

TMC6-209, Transcript of transmembrane channel like 6, humanhuman

TSL 2

Gene TMC6, Length 2,384 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC6-209ENST00000588087 ERCC6Q03468 1493 aa30.21■■■□□ 2.43
TMC6-209ENST00000588087 FKBP8Q14318 412 aa30.2■■■□□ 2.43
TMC6-209ENST00000588087 PRG4Q92954 1404 aaPredicted RBP30.2■■■□□ 2.42
TMC6-209ENST00000588087 FBLN2P98095 1184 aa30.2■■■□□ 2.42
TMC6-209ENST00000588087 CHMP7Q8WUX9 453 aaPredicted RBP30.19■■■□□ 2.42
TMC6-209ENST00000588087 ROCK1Q13464 1354 aa30.19■■■□□ 2.42
TMC6-209ENST00000588087 CDK11AQ9UQ88 783 aaPredicted RBP30.18■■■□□ 2.42
TMC6-209ENST00000588087 DNMT1P26358 1616 aaKnown RBP30.15■■■□□ 2.42
TMC6-209ENST00000588087 PLB1Q6P1J6 1458 aa30.15■■■□□ 2.42
TMC6-209ENST00000588087 EIF4G2P78344 907 aaKnown RBP eCLIP30.15■■■□□ 2.428e-11■□□□□ 9.7
TMC6-209ENST00000588087 ANKRD30BQ9BXX2 1392 aa30.13■■■□□ 2.41
TMC6-209ENST00000588087 CEP170Q5SW79 1584 aa30.12■■■□□ 2.41
TMC6-209ENST00000588087 SLC4A1APQ9BWU0 796 aaKnown RBP30.12■■■□□ 2.41
TMC6-209ENST00000588087 TROQ12816 1431 aaPredicted RBP30.1■■■□□ 2.41
TMC6-209ENST00000588087 CFDP1Q9UEE9 299 aaPredicted RBP30.1■■■□□ 2.41
TMC6-209ENST00000588087 ZNF777Q9ULD5 760 aaPredicted RBP30.1■■■□□ 2.41
TMC6-209ENST00000588087 TSHZ2Q9NRE2 1034 aa30.08■■■□□ 2.41
TMC6-209ENST00000588087 MAGI1Q96QZ7 1491 aaPredicted RBP30.08■■■□□ 2.41
TMC6-209ENST00000588087 NBPF8Q3BBV2 869 aa30.08■■■□□ 2.41
TMC6-209ENST00000588087 SYNJ2O15056 1496 aa30.06■■■□□ 2.4
TMC6-209ENST00000588087 CAMSAP2Q08AD1 1489 aa30.06■■■□□ 2.4
TMC6-209ENST00000588087 RPRD2Q5VT52 1461 aaKnown RBP30.06■■■□□ 2.4
TMC6-209ENST00000588087 C11orf95C9JLR9 678 aaPredicted RBP30.06■■■□□ 2.4
TMC6-209ENST00000588087 TEX14Q8IWB6 1497 aa30.02■■■□□ 2.4
TMC6-209ENST00000588087 GPATCH8Q9UKJ3 1502 aaKnown RBP30.02■■■□□ 2.4
TMC6-209ENST00000588087 NEFLP07196 543 aa30.01■■■□□ 2.4
TMC6-209ENST00000588087 JPH4Q96JJ6 628 aa30.01■■■□□ 2.39
TMC6-209ENST00000588087 KIF14Q15058 1648 aa30.01■■■□□ 2.39
TMC6-209ENST00000588087 HNRNPUQ00839 825 aaKnown RBP eCLIP29.99■■■□□ 2.39
TMC6-209ENST00000588087 PZPP20742 1482 aa29.97■■■□□ 2.39
TMC6-209ENST00000588087 CNTLNQ9NXG0 1405 aa29.97■■■□□ 2.39
TMC6-209ENST00000588087 NCOA1Q15788 1441 aa29.96■■■□□ 2.39
TMC6-209ENST00000588087 CCDC7Q96M83 1385 aa29.96■■■□□ 2.39
TMC6-209ENST00000588087 CARMIL2Q6F5E8 1435 aa29.95■■■□□ 2.39
TMC6-209ENST00000588087 CCDC184Q52MB2 194 aa29.93■■■□□ 2.38
TMC6-209ENST00000588087 NUP160Q12769 1436 aa29.92■■■□□ 2.38
TMC6-209ENST00000588087 ITSN2Q9NZM3 1697 aa29.88■■■□□ 2.37
TMC6-209ENST00000588087 PKD2Q13563 968 aa29.85■■■□□ 2.37
TMC6-209ENST00000588087 KIF7Q2M1P5 1343 aa29.85■■■□□ 2.37
TMC6-209ENST00000588087 ADCY10Q96PN6 1610 aa29.85■■■□□ 2.37
TMC6-209ENST00000588087 ZNF326Q5BKZ1 582 aaKnown RBP29.84■■■□□ 2.37
TMC6-209ENST00000588087 PLEKHD1A6NEE1 506 aa29.84■■■□□ 2.37
TMC6-209ENST00000588087 ADGRL2O95490 1459 aa29.83■■■□□ 2.37
TMC6-209ENST00000588087 SPATA31E1Q6ZUB1 1445 aa29.83■■■□□ 2.37
TMC6-209ENST00000588087 ANKRD30AQ9BXX3 1397 aa29.83■■■□□ 2.37
TMC6-209ENST00000588087 PRKRIP1Q9H875 184 aaPredicted RBP29.83■■■□□ 2.37
TMC6-209ENST00000588087 KIAA1107Q9UPP5 1409 aa29.82■■■□□ 2.36
TMC6-209ENST00000588087 ADGBQ8N7X0 1667 aa29.81■■■□□ 2.36
TMC6-209ENST00000588087 ATP10BO94823 1461 aa29.8■■■□□ 2.36
TMC6-209ENST00000588087 ANKRD50Q9ULJ7 1429 aa29.79■■■□□ 2.36
TMC6-209ENST00000588087 CROCC2H7BZ55 1655 aa29.77■■■□□ 2.36
TMC6-209ENST00000588087 ABCA8O94911 1581 aa29.77■■■□□ 2.36
TMC6-209ENST00000588087 IRX6P78412 446 aaPredicted RBP29.76■■■□□ 2.36
TMC6-209ENST00000588087 FAM9BQ8IZU0 186 aa29.76■■■□□ 2.35
TMC6-209ENST00000588087 ABCC10Q5T3U5 1492 aa29.75■■■□□ 2.35
TMC6-209ENST00000588087 MRS2Q9HD23 443 aa29.75■■■□□ 2.35
TMC6-209ENST00000588087 MBD5Q9P267 1494 aa29.74■■■□□ 2.35
TMC6-209ENST00000588087 C9orf84Q5VXU9 1444 aa29.73■■■□□ 2.35
TMC6-209ENST00000588087 POLR3GLQ9BT43 218 aa29.71■■■□□ 2.35
TMC6-209ENST00000588087 NUP155O75694 1391 aa29.71■■■□□ 2.35
TMC6-209ENST00000588087 CNGB1Q14028 1251 aaPredicted RBP29.71■■■□□ 2.35
TMC6-209ENST00000588087 HNRNPMP52272 730 aaKnown RBP eCLIP29.69■■■□□ 2.342e-8■■■□□ 17
TMC6-209ENST00000588087 CDC42BPAQ5VT25 1732 aa29.69■■■□□ 2.34
TMC6-209ENST00000588087 USP47Q96K76 1375 aa29.68■■■□□ 2.34
TMC6-209ENST00000588087 TSPY4P0CV99 314 aa29.65■■■□□ 2.34
TMC6-209ENST00000588087 TSPY10P0CW01 314 aa29.65■■■□□ 2.34
TMC6-209ENST00000588087 MYT1Q01538 1121 aa29.64■■■□□ 2.34
TMC6-209ENST00000588087 SHANK2Q9UPX8 1470 aa29.63■■■□□ 2.33
TMC6-209ENST00000588087 PTPRGP23470 1445 aa29.62■■■□□ 2.33
TMC6-209ENST00000588087 KIF15Q9NS87 1388 aa29.61■■■□□ 2.33
TMC6-209ENST00000588087 BCORL1Q5H9F3 1711 aa29.57■■■□□ 2.32
TMC6-209ENST00000588087 DHX29Q7Z478 1369 aaKnown RBP29.56■■■□□ 2.32
TMC6-209ENST00000588087 KDM2AQ9Y2K7 1162 aa29.56■■■□□ 2.32
TMC6-209ENST00000588087 POLR1AO95602 1720 aaPredicted RBP29.53■■■□□ 2.32
TMC6-209ENST00000588087 ZBED9Q6R2W3 1325 aa29.52■■■□□ 2.32
TMC6-209ENST00000588087 CARD11Q9BXL7 1154 aa29.52■■■□□ 2.32
TMC6-209ENST00000588087 RBM19Q9Y4C8 960 aaKnown RBP29.52■■■□□ 2.32
TMC6-209ENST00000588087 KDM5CP41229 1560 aa29.51■■■□□ 2.32
TMC6-209ENST00000588087 UHRF1BP1Q6BDS2 1440 aa29.5■■■□□ 2.31
TMC6-209ENST00000588087 RALGAPBQ86X10 1494 aa29.49■■■□□ 2.31
TMC6-209ENST00000588087 KDM5DQ9BY66 1539 aa29.48■■■□□ 2.31
TMC6-209ENST00000588087 DCAF11Q8TEB1 546 aa29.47■■■□□ 2.31
TMC6-209ENST00000588087 SAMD9LQ8IVG5 1584 aa29.47■■■□□ 2.31
TMC6-209ENST00000588087 ARHGEF5Q12774 1597 aa29.46■■■□□ 2.31
TMC6-209ENST00000588087 CCDC141Q6ZP82 1450 aa29.46■■■□□ 2.31
TMC6-209ENST00000588087 ARHGEF12Q9NZN5 1544 aa29.42■■■□□ 2.3
TMC6-209ENST00000588087 SENP3-EIF4A1A0A087X0R7 540 aa29.42■■■□□ 2.3
TMC6-209ENST00000588087 ST20-MTHFSA0A0A6YYL1 179 aa29.41■■■□□ 2.3
TMC6-209ENST00000588087 PREX2Q70Z35 1606 aa29.38■■■□□ 2.29
TMC6-209ENST00000588087 CDC42BPBQ9Y5S2 1711 aa29.38■■■□□ 2.29
TMC6-209ENST00000588087 FAM135AQ9P2D6 1515 aa29.38■■■□□ 2.29
TMC6-209ENST00000588087 SYCP2Q9BX26 1530 aa29.38■■■□□ 2.29
TMC6-209ENST00000588087 ARID4BQ4LE39 1312 aaPredicted RBP29.37■■■□□ 2.29
TMC6-209ENST00000588087 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.37■■■□□ 2.298e-12■■□□□ 11.7
TMC6-209ENST00000588087 ARHGAP5Q13017 1502 aa29.34■■■□□ 2.29
TMC6-209ENST00000588087 TTC37Q6PGP7 1564 aa29.34■■■□□ 2.29
TMC6-209ENST00000588087 ROCK2O75116 1388 aaKnown RBP29.34■■■□□ 2.29
TMC6-209ENST00000588087 RGL3Q3MIN7 710 aa29.33■■■□□ 2.29
TMC6-209ENST00000588087 PPP4R2Q9NY27 417 aa29.33■■■□□ 2.29
TMC6-209ENST00000588087 CHD1O14646 1710 aa29.32■■■□□ 2.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms