RNA–Protein interactions for RNA: ENST00000588011.1

SNRPCP20-201, Transcript of small nuclear ribonucleoprotein polypeptide C pseudogene 20, humanhuman

BASIC

Gene SNRPCP20, Length 210 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPCP20-201ENST00000588011 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.98□□□□□ -0.17
SNRPCP20-201ENST00000588011 ARHGEF12Q9NZN5 1544 aa13.98□□□□□ -0.17
SNRPCP20-201ENST00000588011 HECW1Q76N89 1606 aa13.97□□□□□ -0.17
SNRPCP20-201ENST00000588011 SPATA31D1Q6ZQQ2 1576 aa13.96□□□□□ -0.18
SNRPCP20-201ENST00000588011 ATP10AO60312 1499 aa13.94□□□□□ -0.18
SNRPCP20-201ENST00000588011 PTPRTO14522 1441 aa13.93□□□□□ -0.18
SNRPCP20-201ENST00000588011 PLPPR3Q6T4P5 718 aa13.93□□□□□ -0.18
SNRPCP20-201ENST00000588011 IQSEC2Q5JU85 1478 aa13.93□□□□□ -0.18
SNRPCP20-201ENST00000588011 C9orf84Q5VXU9 1444 aa13.91□□□□□ -0.18
SNRPCP20-201ENST00000588011 MLECQ14165 292 aa13.91□□□□□ -0.18
SNRPCP20-201ENST00000588011 PLCH2O75038 1416 aa13.9□□□□□ -0.18
SNRPCP20-201ENST00000588011 SCAPERQ9BY12 1400 aa13.9□□□□□ -0.18
SNRPCP20-201ENST00000588011 UHRF1BP1Q6BDS2 1440 aa13.9□□□□□ -0.19
SNRPCP20-201ENST00000588011 LTBP4Q8N2S1 1624 aa13.89□□□□□ -0.19
SNRPCP20-201ENST00000588011 CEBPAP49715 358 aaPredicted RBP13.87□□□□□ -0.19
SNRPCP20-201ENST00000588011 MYO5CQ9NQX4 1742 aa13.85□□□□□ -0.19
SNRPCP20-201ENST00000588011 REREQ9P2R6 1566 aa13.85□□□□□ -0.19
SNRPCP20-201ENST00000588011 CSRNP3Q8WYN3 585 aa13.85□□□□□ -0.19
SNRPCP20-201ENST00000588011 C3P01024 1663 aa13.85□□□□□ -0.19
SNRPCP20-201ENST00000588011 KDM5CP41229 1560 aa13.83□□□□□ -0.19
SNRPCP20-201ENST00000588011 ZNF518AQ6AHZ1 1483 aa13.83□□□□□ -0.2
SNRPCP20-201ENST00000588011 EFCAB2Q5VUJ9 269 aa13.83□□□□□ -0.2
SNRPCP20-201ENST00000588011 TRAPPC8Q9Y2L5 1435 aa13.8□□□□□ -0.2
SNRPCP20-201ENST00000588011 AGLP35573 1532 aa13.8□□□□□ -0.2
SNRPCP20-201ENST00000588011 NCOA1Q15788 1441 aa13.79□□□□□ -0.2
SNRPCP20-201ENST00000588011 DIP2CQ9Y2E4 1556 aa13.79□□□□□ -0.2
SNRPCP20-201ENST00000588011 CDK13Q14004 1512 aaKnown RBP13.78□□□□□ -0.2
SNRPCP20-201ENST00000588011 MLH3Q9UHC1 1453 aa13.77□□□□□ -0.21
SNRPCP20-201ENST00000588011 EEA1Q15075 1411 aa13.75□□□□□ -0.21
SNRPCP20-201ENST00000588011 CNTLNQ9NXG0 1405 aa13.75□□□□□ -0.21
SNRPCP20-201ENST00000588011 AFAP1Q8N556 730 aa13.75□□□□□ -0.21
SNRPCP20-201ENST00000588011 ABCA6Q8N139 1617 aa13.75□□□□□ -0.21
SNRPCP20-201ENST00000588011 CDK11AQ9UQ88 783 aaPredicted RBP13.74□□□□□ -0.21
SNRPCP20-201ENST00000588011 MROH2AA6NES4 1674 aa13.74□□□□□ -0.21
SNRPCP20-201ENST00000588011 NPATQ14207 1427 aa13.73□□□□□ -0.21
SNRPCP20-201ENST00000588011 CDC42BPBQ9Y5S2 1711 aa13.73□□□□□ -0.21
SNRPCP20-201ENST00000588011 ESF1Q9H501 851 aaKnown RBP13.72□□□□□ -0.21
SNRPCP20-201ENST00000588011 KIF14Q15058 1648 aa13.72□□□□□ -0.21
SNRPCP20-201ENST00000588011 CAMSAP1Q5T5Y3 1602 aa13.72□□□□□ -0.21
SNRPCP20-201ENST00000588011 ARHGAP5Q13017 1502 aa13.71□□□□□ -0.21
SNRPCP20-201ENST00000588011 RANGAP1P46060 587 aaPredicted RBP13.71□□□□□ -0.21
SNRPCP20-201ENST00000588011 FMN1Q68DA7 1419 aa13.7□□□□□ -0.22
SNRPCP20-201ENST00000588011 KIDINS220Q9ULH0 1771 aa13.7□□□□□ -0.22
SNRPCP20-201ENST00000588011 TROQ12816 1431 aaPredicted RBP13.69□□□□□ -0.22
SNRPCP20-201ENST00000588011 ZNF142P52746 1687 aaPredicted RBP13.69□□□□□ -0.22
SNRPCP20-201ENST00000588011 PLA2R1Q13018 1463 aa13.68□□□□□ -0.22
SNRPCP20-201ENST00000588011 UBAP1LF5GYI3 381 aa13.68□□□□□ -0.22
SNRPCP20-201ENST00000588011 SUPT6HQ7KZ85 1726 aaKnown RBP13.67□□□□□ -0.22
SNRPCP20-201ENST00000588011 ITSN2Q9NZM3 1697 aa13.67□□□□□ -0.22
SNRPCP20-201ENST00000588011 PKD2Q13563 968 aa13.67□□□□□ -0.22
SNRPCP20-201ENST00000588011 MYT1LQ9UL68 1186 aa13.67□□□□□ -0.22
SNRPCP20-201ENST00000588011 ZNF335Q9H4Z2 1342 aaPredicted RBP13.66□□□□□ -0.22
SNRPCP20-201ENST00000588011 PREX2Q70Z35 1606 aa13.66□□□□□ -0.22
SNRPCP20-201ENST00000588011 CLIP1P30622 1438 aa13.65□□□□□ -0.22
SNRPCP20-201ENST00000588011 ABCC1P33527 1531 aa13.65□□□□□ -0.22
SNRPCP20-201ENST00000588011 ZMYM3Q14202 1370 aa13.65□□□□□ -0.22
SNRPCP20-201ENST00000588011 TCOF1Q13428 1488 aaKnown RBP13.65□□□□□ -0.22
SNRPCP20-201ENST00000588011 LRRIQ1Q96JM4 1722 aa13.64□□□□□ -0.23
SNRPCP20-201ENST00000588011 NCKAP5LQ9HCH0 1330 aa13.64□□□□□ -0.23
SNRPCP20-201ENST00000588011 MED1Q15648 1581 aaPredicted RBP13.63□□□□□ -0.23
SNRPCP20-201ENST00000588011 MYO3AQ8NEV4 1616 aa13.61□□□□□ -0.23
SNRPCP20-201ENST00000588011 CDC42BPAQ5VT25 1732 aa13.61□□□□□ -0.23
SNRPCP20-201ENST00000588011 ATP1B4Q9UN42 357 aaPredicted RBP13.6□□□□□ -0.23
SNRPCP20-201ENST00000588011 CEP170BQ9Y4F5 1589 aaPredicted RBP13.6□□□□□ -0.23
SNRPCP20-201ENST00000588011 SAMD9LQ8IVG5 1584 aa13.59□□□□□ -0.23
SNRPCP20-201ENST00000588011 ARHGAP35Q9NRY4 1499 aa13.59□□□□□ -0.23
SNRPCP20-201ENST00000588011 CLTCQ00610 1675 aaKnown RBP13.59□□□□□ -0.23
SNRPCP20-201ENST00000588011 PTPRKQ15262 1439 aa13.58□□□□□ -0.24
SNRPCP20-201ENST00000588011 PPP6R1Q9UPN7 881 aa13.58□□□□□ -0.24
SNRPCP20-201ENST00000588011 TOM1O60784 492 aa13.57□□□□□ -0.24
SNRPCP20-201ENST00000588011 HSPA1LP34931 641 aa13.57□□□□□ -0.24
SNRPCP20-201ENST00000588011 CPS1P31327 1500 aa13.57□□□□□ -0.24
SNRPCP20-201ENST00000588011 PLXNC1O60486 1568 aa13.56□□□□□ -0.24
SNRPCP20-201ENST00000588011 POLR1AO95602 1720 aaPredicted RBP13.56□□□□□ -0.24
SNRPCP20-201ENST00000588011 DNMT1P26358 1616 aaKnown RBP13.54□□□□□ -0.24
SNRPCP20-201ENST00000588011 A2ML1A8K2U0 1454 aa13.54□□□□□ -0.24
SNRPCP20-201ENST00000588011 CCDC18Q5T9S5 1454 aa13.53□□□□□ -0.24
SNRPCP20-201ENST00000588011 SPAG9O60271 1321 aaKnown RBP13.52□□□□□ -0.25
SNRPCP20-201ENST00000588011 ATP7AQ04656 1500 aa13.52□□□□□ -0.25
SNRPCP20-201ENST00000588011 INO80Q9ULG1 1556 aaPredicted RBP13.52□□□□□ -0.25
SNRPCP20-201ENST00000588011 A2MP01023 1474 aa13.51□□□□□ -0.25
SNRPCP20-201ENST00000588011 SHANK2Q9UPX8 1470 aa13.51□□□□□ -0.25
SNRPCP20-201ENST00000588011 KIAA1107Q9UPP5 1409 aa13.51□□□□□ -0.25
SNRPCP20-201ENST00000588011 ADGBQ8N7X0 1667 aa13.5□□□□□ -0.25
SNRPCP20-201ENST00000588011 NEURL4Q96JN8 1562 aa13.5□□□□□ -0.25
SNRPCP20-201ENST00000588011 SYCP2Q9BX26 1530 aa13.49□□□□□ -0.25
SNRPCP20-201ENST00000588011 UBTFP17480 764 aaKnown RBP13.49□□□□□ -0.25
SNRPCP20-201ENST00000588011 PIP4K2BP78356 416 aa13.49□□□□□ -0.25
SNRPCP20-201ENST00000588011 ALKQ9UM73 1620 aa13.49□□□□□ -0.25
SNRPCP20-201ENST00000588011 PLEKHH2Q8IVE3 1493 aa13.48□□□□□ -0.25
SNRPCP20-201ENST00000588011 CASKIN1Q8WXD9 1431 aa13.48□□□□□ -0.25
SNRPCP20-201ENST00000588011 SCAF1Q9H7N4 1312 aaKnown RBP13.48□□□□□ -0.25
SNRPCP20-201ENST00000588011 GPATCH8Q9UKJ3 1502 aaKnown RBP13.47□□□□□ -0.25
SNRPCP20-201ENST00000588011 VWDEQ8N2E2 1590 aa13.46□□□□□ -0.25
SNRPCP20-201ENST00000588011 HNRNPMP52272 730 aaKnown RBP eCLIP13.46□□□□□ -0.25
SNRPCP20-201ENST00000588011 GGT6Q6P531 493 aa13.46□□□□□ -0.25
SNRPCP20-201ENST00000588011 PHF23Q9BUL5 403 aaPredicted RBP13.46□□□□□ -0.25
SNRPCP20-201ENST00000588011 DEPDC5O75140 1603 aa13.46□□□□□ -0.26
SNRPCP20-201ENST00000588011 MED14O60244 1454 aa13.45□□□□□ -0.26
SNRPCP20-201ENST00000588011 FAM135AQ9P2D6 1515 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms