RNA–Protein interactions for RNA: ENST00000587995.5

CACNA2D4-222, Transcript of calcium voltage-gated channel auxiliary subunit alpha2delta 4, human

TSL 5 BASIC

Gene CACNA2D4, Length 3,883 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNA2D4-222	ENST00000587995	KIF7	Q2M1P5	1343 aa		13.03	□□□□□ -0.32
CACNA2D4-222	ENST00000587995	MAPKBP1	O60336	1514 aa		13.03	□□□□□ -0.32
CACNA2D4-222	ENST00000587995	ERCC6	Q03468	1493 aa		13.01	□□□□□ -0.33
CACNA2D4-222	ENST00000587995	JPH4	Q96JJ6	628 aa		13.01	□□□□□ -0.33
CACNA2D4-222	ENST00000587995	CCDC7	Q96M83	1385 aa		13.01	□□□□□ -0.33
CACNA2D4-222	ENST00000587995	NAIP	Q13075	1403 aa		13	□□□□□ -0.33
CACNA2D4-222	ENST00000587995	LAS1L	Q9Y4W2	734 aa	Known RBP	13	□□□□□ -0.33
CACNA2D4-222	ENST00000587995	NOP58	Q9Y2X3	529 aa	Known RBP	13	□□□□□ -0.33
CACNA2D4-222	ENST00000587995	HFM1	A2PYH4	1435 aa		13	□□□□□ -0.33
CACNA2D4-222	ENST00000587995	NUDC	Q9Y266	331 aa		12.99	□□□□□ -0.33
CACNA2D4-222	ENST00000587995	CC2D2A	Q9P2K1	1620 aa		12.98	□□□□□ -0.33
CACNA2D4-222	ENST00000587995	KNSTRN	Q9Y448	316 aa		12.98	□□□□□ -0.33
CACNA2D4-222	ENST00000587995	PTPRK	Q15262	1439 aa		12.98	□□□□□ -0.33
CACNA2D4-222	ENST00000587995	NEUROD2	Q15784	382 aa		12.98	□□□□□ -0.33
CACNA2D4-222	ENST00000587995	ANKRD30A	Q9BXX3	1397 aa		12.97	□□□□□ -0.33
CACNA2D4-222	ENST00000587995	USP47	Q96K76	1375 aa		12.97	□□□□□ -0.33
CACNA2D4-222	ENST00000587995	ZBED9	Q6R2W3	1325 aa		12.97	□□□□□ -0.33
CACNA2D4-222	ENST00000587995	TNNT2	P45379	298 aa	Predicted RBP	12.96	□□□□□ -0.33
CACNA2D4-222	ENST00000587995	ROCK2	O75116	1388 aa	Known RBP	12.96	□□□□□ -0.33
CACNA2D4-222	ENST00000587995	RGS3	P49796	1198 aa		12.94	□□□□□ -0.34
CACNA2D4-222	ENST00000587995	RCAN3	Q9UKA8	241 aa		12.94	□□□□□ -0.34
CACNA2D4-222	ENST00000587995	CNTLN	Q9NXG0	1405 aa		12.94	□□□□□ -0.34
CACNA2D4-222	ENST00000587995	PLIN1	O60240	522 aa		12.93	□□□□□ -0.34
CACNA2D4-222	ENST00000587995	ERICH6B	Q5W0A0	696 aa		12.93	□□□□□ -0.34
CACNA2D4-222	ENST00000587995	RTN4	Q9NQC3	1192 aa	Known RBP	12.93	□□□□□ -0.34
CACNA2D4-222	ENST00000587995	DEK	P35659	375 aa	Known RBP	12.92	□□□□□ -0.34
CACNA2D4-222	ENST00000587995	CDK13	Q14004	1512 aa	Known RBP	12.92	□□□□□ -0.34
CACNA2D4-222	ENST00000587995	ABCA10	Q8WWZ4	1543 aa		12.92	□□□□□ -0.34
CACNA2D4-222	ENST00000587995	EFCAB5	A4FU69	1503 aa		12.91	□□□□□ -0.34
CACNA2D4-222	ENST00000587995	TMF1	P82094	1093 aa		12.91	□□□□□ -0.34
CACNA2D4-222	ENST00000587995	EXOC6	Q8TAG9	804 aa		12.9	□□□□□ -0.34
CACNA2D4-222	ENST00000587995	CARMIL2	Q6F5E8	1435 aa		12.9	□□□□□ -0.34
CACNA2D4-222	ENST00000587995	GOLGA6L2	Q8N9W4	650 aa	Predicted RBP	12.9	□□□□□ -0.34
CACNA2D4-222	ENST00000587995	MAP3K1	Q13233	1512 aa		12.89	□□□□□ -0.35
CACNA2D4-222	ENST00000587995	DNMBP	Q6XZF7	1577 aa		12.89	□□□□□ -0.35
CACNA2D4-222	ENST00000587995	ARX	Q96QS3	562 aa		12.89	□□□□□ -0.35
CACNA2D4-222	ENST00000587995	KTN1	Q86UP2	1357 aa	Known RBP	12.89	□□□□□ -0.35
CACNA2D4-222	ENST00000587995	DROSHA	Q9NRR4	1374 aa	Known RBP eCLIP	12.89	□□□□□ -0.35	7e-7	■□□□□ 10.9
CACNA2D4-222	ENST00000587995	RALBP1	Q15311	655 aa		12.88	□□□□□ -0.35
CACNA2D4-222	ENST00000587995	NLRP13	Q86W25	1043 aa		12.88	□□□□□ -0.35
CACNA2D4-222	ENST00000587995	PRG4	Q92954	1404 aa	Predicted RBP	12.87	□□□□□ -0.35
CACNA2D4-222	ENST00000587995	PRDM2	Q13029	1718 aa		12.87	□□□□□ -0.35
CACNA2D4-222	ENST00000587995	NEFM	P07197	916 aa		12.87	□□□□□ -0.35
CACNA2D4-222	ENST00000587995	PANK3	Q9H999	370 aa		12.87	□□□□□ -0.35
CACNA2D4-222	ENST00000587995	AKNA	Q7Z591	1439 aa		12.87	□□□□□ -0.35
CACNA2D4-222	ENST00000587995	MSH5	O43196	834 aa		12.86	□□□□□ -0.35
CACNA2D4-222	ENST00000587995	FRAT1	Q92837	279 aa	Predicted RBP	12.86	□□□□□ -0.35
CACNA2D4-222	ENST00000587995	CCDC146	Q8IYE0	955 aa		12.85	□□□□□ -0.35
CACNA2D4-222	ENST00000587995	NBPF1	Q3BBV0	1214 aa		12.85	□□□□□ -0.35
CACNA2D4-222	ENST00000587995	MYBBP1A	Q9BQG0	1328 aa	Known RBP	12.84	□□□□□ -0.35
CACNA2D4-222	ENST00000587995	CDCA7L	Q96GN5	454 aa		12.84	□□□□□ -0.35
CACNA2D4-222	ENST00000587995	FANCI	Q9NVI1	1328 aa		12.84	□□□□□ -0.35
CACNA2D4-222	ENST00000587995	EHBP1L1	Q8N3D4	1523 aa		12.84	□□□□□ -0.35
CACNA2D4-222	ENST00000587995	EPRS	P07814	1512 aa	Known RBP	12.83	□□□□□ -0.36
CACNA2D4-222	ENST00000587995	URB2	Q14146	1524 aa	Known RBP	12.83	□□□□□ -0.36
CACNA2D4-222	ENST00000587995	ANKRD50	Q9ULJ7	1429 aa		12.83	□□□□□ -0.36
CACNA2D4-222	ENST00000587995	KIF15	Q9NS87	1388 aa		12.83	□□□□□ -0.36
CACNA2D4-222	ENST00000587995	PRKCSH	P14314	528 aa	Predicted RBP	12.82	□□□□□ -0.36
CACNA2D4-222	ENST00000587995	SAFB2	Q14151	953 aa	Known RBP eCLIP	12.82	□□□□□ -0.36
CACNA2D4-222	ENST00000587995	IPO9	Q96P70	1041 aa	Known RBP	12.82	□□□□□ -0.36
CACNA2D4-222	ENST00000587995	NPM1	P06748	294 aa	Known RBP eCLIP	12.81	□□□□□ -0.36
CACNA2D4-222	ENST00000587995	RRP1	P56182	461 aa	Known RBP	12.81	□□□□□ -0.36
CACNA2D4-222	ENST00000587995	CDCA8	Q53HL2	280 aa		12.81	□□□□□ -0.36
CACNA2D4-222	ENST00000587995	ANKRD30B	Q9BXX2	1392 aa		12.81	□□□□□ -0.36
CACNA2D4-222	ENST00000587995	PTPN23	Q9H3S7	1636 aa		12.81	□□□□□ -0.36
CACNA2D4-222	ENST00000587995	SUPT6H	Q7KZ85	1726 aa	Known RBP	12.81	□□□□□ -0.36
CACNA2D4-222	ENST00000587995	EIF5B	O60841	1220 aa	Known RBP	12.81	□□□□□ -0.36
CACNA2D4-222	ENST00000587995	DAPK1	P53355	1430 aa		12.8	□□□□□ -0.36
CACNA2D4-222	ENST00000587995	PNISR	Q8TF01	805 aa	Known RBP	12.8	□□□□□ -0.36
CACNA2D4-222	ENST00000587995	PAK3	O75914	559 aa	Predicted RBP	12.8	□□□□□ -0.36
CACNA2D4-222	ENST00000587995	CCDC144A	A2RUR9	1427 aa		12.79	□□□□□ -0.36
CACNA2D4-222	ENST00000587995	STAG3	Q9UJ98	1225 aa		12.79	□□□□□ -0.36
CACNA2D4-222	ENST00000587995	GRIN2B	Q13224	1484 aa		12.79	□□□□□ -0.36
CACNA2D4-222	ENST00000587995	MIA2	Q96PC5	1412 aa		12.79	□□□□□ -0.36
CACNA2D4-222	ENST00000587995	SLC4A3	P48751	1232 aa		12.79	□□□□□ -0.36
CACNA2D4-222	ENST00000587995	CRBN	Q96SW2	442 aa		12.78	□□□□□ -0.36
CACNA2D4-222	ENST00000587995	KIF3B	O15066	747 aa		12.77	□□□□□ -0.36
CACNA2D4-222	ENST00000587995	ANO8	Q9HCE9	1232 aa	Predicted RBP	12.77	□□□□□ -0.36
CACNA2D4-222	ENST00000587995	ZBTB4	Q9P1Z0	1013 aa	Predicted RBP	12.77	□□□□□ -0.36
CACNA2D4-222	ENST00000587995	ABCC5	O15440	1437 aa		12.77	□□□□□ -0.37
CACNA2D4-222	ENST00000587995	PTPRG	P23470	1445 aa		12.77	□□□□□ -0.37
CACNA2D4-222	ENST00000587995	PPM1G	O15355	546 aa	Predicted RBP	12.77	□□□□□ -0.37
CACNA2D4-222	ENST00000587995	PDE4A	P27815	886 aa		12.77	□□□□□ -0.37
CACNA2D4-222	ENST00000587995	EFCAB2	Q5VUJ9	269 aa		12.77	□□□□□ -0.37
CACNA2D4-222	ENST00000587995	GGT6	Q6P531	493 aa		12.77	□□□□□ -0.37
CACNA2D4-222	ENST00000587995	TCERG1	O14776	1098 aa	Known RBP	12.76	□□□□□ -0.37
CACNA2D4-222	ENST00000587995	NUTM2D	Q5VT03	806 aa	Predicted RBP	12.76	□□□□□ -0.37
CACNA2D4-222	ENST00000587995	UPF2	Q9HAU5	1272 aa	Known RBP	12.76	□□□□□ -0.37
CACNA2D4-222	ENST00000587995	SKAP1	Q86WV1	359 aa		12.75	□□□□□ -0.37
CACNA2D4-222	ENST00000587995	DDRGK1	Q96HY6	314 aa		12.75	□□□□□ -0.37
CACNA2D4-222	ENST00000587995	SLC24A1	O60721	1099 aa		12.75	□□□□□ -0.37
CACNA2D4-222	ENST00000587995	PLPPR3	Q6T4P5	718 aa		12.75	□□□□□ -0.37
CACNA2D4-222	ENST00000587995	KIAA1107	Q9UPP5	1409 aa		12.74	□□□□□ -0.37
CACNA2D4-222	ENST00000587995	SNAPC4	Q5SXM2	1469 aa		12.73	□□□□□ -0.37
CACNA2D4-222	ENST00000587995	PLB1	Q6P1J6	1458 aa		12.73	□□□□□ -0.37
CACNA2D4-222	ENST00000587995	GOLGA2	Q08379	1002 aa		12.73	□□□□□ -0.37
CACNA2D4-222	ENST00000587995	RRP7A	Q9Y3A4	280 aa	Known RBP	12.73	□□□□□ -0.37
CACNA2D4-222	ENST00000587995	NCOA1	Q15788	1441 aa		12.73	□□□□□ -0.37
CACNA2D4-222	ENST00000587995	CUL7	Q14999	1698 aa		12.73	□□□□□ -0.37
CACNA2D4-222	ENST00000587995	U2SURP	O15042	1029 aa	Known RBP	12.73	□□□□□ -0.37

Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms