RNA–Protein interactions for RNA: ENST00000587477.2

LINC01535-202, Transcript of long intergenic non-protein coding RNA 1535, humanhuman

TSL 2

Gene LINC01535, Length 623 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01535-202ENST00000587477 CFAP74Q9C0B2 1584 aa13.18□□□□□ -0.3
LINC01535-202ENST00000587477 ARHGEF12Q9NZN5 1544 aa13.18□□□□□ -0.3
LINC01535-202ENST00000587477 RAPGEF6Q8TEU7 1601 aa13.17□□□□□ -0.3
LINC01535-202ENST00000587477 PRXQ9BXM0 1461 aa13.17□□□□□ -0.3
LINC01535-202ENST00000587477 PLEKHD1A6NEE1 506 aa13.17□□□□□ -0.3
LINC01535-202ENST00000587477 CEBPAP49715 358 aaPredicted RBP13.16□□□□□ -0.3
LINC01535-202ENST00000587477 UHRF1BP1Q6BDS2 1440 aa13.15□□□□□ -0.3
LINC01535-202ENST00000587477 LTBP4Q8N2S1 1624 aa13.15□□□□□ -0.3
LINC01535-202ENST00000587477 ATP10AO60312 1499 aa13.15□□□□□ -0.3
LINC01535-202ENST00000587477 HECW1Q76N89 1606 aa13.14□□□□□ -0.31
LINC01535-202ENST00000587477 NUP153P49790 1475 aaKnown RBP13.13□□□□□ -0.31
LINC01535-202ENST00000587477 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.12□□□□□ -0.31
LINC01535-202ENST00000587477 C9orf84Q5VXU9 1444 aa13.12□□□□□ -0.31
LINC01535-202ENST00000587477 SAMD9Q5K651 1589 aa13.11□□□□□ -0.31
LINC01535-202ENST00000587477 SCAPERQ9BY12 1400 aa13.1□□□□□ -0.31
LINC01535-202ENST00000587477 PLCH2O75038 1416 aa13.07□□□□□ -0.32
LINC01535-202ENST00000587477 NCOA1Q15788 1441 aa13.05□□□□□ -0.32
LINC01535-202ENST00000587477 TRAPPC8Q9Y2L5 1435 aa13.05□□□□□ -0.32
LINC01535-202ENST00000587477 UBAP1LF5GYI3 381 aa13.04□□□□□ -0.32
LINC01535-202ENST00000587477 EFCAB2Q5VUJ9 269 aa13.04□□□□□ -0.32
LINC01535-202ENST00000587477 C3P01024 1663 aa13.02□□□□□ -0.33
LINC01535-202ENST00000587477 REREQ9P2R6 1566 aa13□□□□□ -0.33
LINC01535-202ENST00000587477 ZNF518AQ6AHZ1 1483 aa12.99□□□□□ -0.33
LINC01535-202ENST00000587477 ESF1Q9H501 851 aaKnown RBP12.99□□□□□ -0.33
LINC01535-202ENST00000587477 AFAP1Q8N556 730 aa12.98□□□□□ -0.33
LINC01535-202ENST00000587477 AGLP35573 1532 aa12.98□□□□□ -0.33
LINC01535-202ENST00000587477 ZNF335Q9H4Z2 1342 aaPredicted RBP12.97□□□□□ -0.33
LINC01535-202ENST00000587477 KDM5CP41229 1560 aa12.97□□□□□ -0.33
LINC01535-202ENST00000587477 CNTLNQ9NXG0 1405 aa12.96□□□□□ -0.33
LINC01535-202ENST00000587477 CAMSAP1Q5T5Y3 1602 aa12.96□□□□□ -0.33
LINC01535-202ENST00000587477 PKD2Q13563 968 aa12.96□□□□□ -0.33
LINC01535-202ENST00000587477 MED1Q15648 1581 aaPredicted RBP12.95□□□□□ -0.34
LINC01535-202ENST00000587477 CSRNP3Q8WYN3 585 aa12.95□□□□□ -0.34
LINC01535-202ENST00000587477 NPATQ14207 1427 aa12.95□□□□□ -0.34
LINC01535-202ENST00000587477 DIP2CQ9Y2E4 1556 aa12.94□□□□□ -0.34
LINC01535-202ENST00000587477 NCKAP5LQ9HCH0 1330 aa12.94□□□□□ -0.34
LINC01535-202ENST00000587477 MYO5CQ9NQX4 1742 aa12.94□□□□□ -0.34
LINC01535-202ENST00000587477 MLH3Q9UHC1 1453 aa12.94□□□□□ -0.34
LINC01535-202ENST00000587477 HSPA1LP34931 641 aa12.94□□□□□ -0.34
LINC01535-202ENST00000587477 MYT1LQ9UL68 1186 aa12.93□□□□□ -0.34
LINC01535-202ENST00000587477 PLA2R1Q13018 1463 aa12.91□□□□□ -0.34
LINC01535-202ENST00000587477 CDK11AQ9UQ88 783 aaPredicted RBP12.91□□□□□ -0.34
LINC01535-202ENST00000587477 CDK13Q14004 1512 aaKnown RBP12.91□□□□□ -0.34
LINC01535-202ENST00000587477 TOM1O60784 492 aa12.9□□□□□ -0.34
LINC01535-202ENST00000587477 RANGAP1P46060 587 aaPredicted RBP12.9□□□□□ -0.34
LINC01535-202ENST00000587477 ABCA6Q8N139 1617 aa12.89□□□□□ -0.35
LINC01535-202ENST00000587477 ZMYM3Q14202 1370 aa12.89□□□□□ -0.35
LINC01535-202ENST00000587477 TCOF1Q13428 1488 aaKnown RBP12.88□□□□□ -0.35
LINC01535-202ENST00000587477 MROH2AA6NES4 1674 aa12.88□□□□□ -0.35
LINC01535-202ENST00000587477 ARHGAP5Q13017 1502 aa12.88□□□□□ -0.35
LINC01535-202ENST00000587477 PHF23Q9BUL5 403 aaPredicted RBP12.87□□□□□ -0.35
LINC01535-202ENST00000587477 PPP6R1Q9UPN7 881 aa12.86□□□□□ -0.35
LINC01535-202ENST00000587477 PIP4K2BP78356 416 aa12.85□□□□□ -0.35
LINC01535-202ENST00000587477 SCAF1Q9H7N4 1312 aaKnown RBP12.85□□□□□ -0.35
LINC01535-202ENST00000587477 ZNF142P52746 1687 aaPredicted RBP12.84□□□□□ -0.35
LINC01535-202ENST00000587477 TROQ12816 1431 aaPredicted RBP12.84□□□□□ -0.35
LINC01535-202ENST00000587477 KIF14Q15058 1648 aa12.84□□□□□ -0.35
LINC01535-202ENST00000587477 CPS1P31327 1500 aa12.83□□□□□ -0.36
LINC01535-202ENST00000587477 KIDINS220Q9ULH0 1771 aa12.82□□□□□ -0.36
LINC01535-202ENST00000587477 SUPT6HQ7KZ85 1726 aaKnown RBP12.82□□□□□ -0.36
LINC01535-202ENST00000587477 CDC42BPBQ9Y5S2 1711 aa12.82□□□□□ -0.36
LINC01535-202ENST00000587477 CEP170BQ9Y4F5 1589 aaPredicted RBP12.81□□□□□ -0.36
LINC01535-202ENST00000587477 PTPRKQ15262 1439 aa12.81□□□□□ -0.36
LINC01535-202ENST00000587477 CLIP1P30622 1438 aa12.8□□□□□ -0.36
LINC01535-202ENST00000587477 FMN1Q68DA7 1419 aa12.8□□□□□ -0.36
LINC01535-202ENST00000587477 ATP1B4Q9UN42 357 aaPredicted RBP12.8□□□□□ -0.36
LINC01535-202ENST00000587477 MYO3AQ8NEV4 1616 aa12.8□□□□□ -0.36
LINC01535-202ENST00000587477 ABCC1P33527 1531 aa12.79□□□□□ -0.36
LINC01535-202ENST00000587477 EEA1Q15075 1411 aa12.79□□□□□ -0.36
LINC01535-202ENST00000587477 SHANK2Q9UPX8 1470 aa12.78□□□□□ -0.36
LINC01535-202ENST00000587477 ITSN2Q9NZM3 1697 aa12.78□□□□□ -0.36
LINC01535-202ENST00000587477 LOC105371045A0A1W2PR82 267 aa12.78□□□□□ -0.36
LINC01535-202ENST00000587477 A2ML1A8K2U0 1454 aa12.77□□□□□ -0.37
LINC01535-202ENST00000587477 CLTCQ00610 1675 aaKnown RBP12.75□□□□□ -0.37
LINC01535-202ENST00000587477 PREX2Q70Z35 1606 aa12.75□□□□□ -0.37
LINC01535-202ENST00000587477 RGS17Q9UGC6 210 aaPredicted RBP12.75□□□□□ -0.37
LINC01535-202ENST00000587477 DNMT1P26358 1616 aaKnown RBP12.74□□□□□ -0.37
LINC01535-202ENST00000587477 ALKQ9UM73 1620 aa12.74□□□□□ -0.37
LINC01535-202ENST00000587477 SAMD9LQ8IVG5 1584 aa12.73□□□□□ -0.37
LINC01535-202ENST00000587477 SPAG9O60271 1321 aaKnown RBP12.73□□□□□ -0.37
LINC01535-202ENST00000587477 NEURL4Q96JN8 1562 aa12.72□□□□□ -0.37
LINC01535-202ENST00000587477 POLR1AO95602 1720 aaPredicted RBP12.71□□□□□ -0.37
LINC01535-202ENST00000587477 GGT6Q6P531 493 aa12.71□□□□□ -0.37
LINC01535-202ENST00000587477 ANKLE2Q86XL3 938 aa12.71□□□□□ -0.37
LINC01535-202ENST00000587477 PLXNC1O60486 1568 aa12.7□□□□□ -0.38
LINC01535-202ENST00000587477 VWDEQ8N2E2 1590 aa12.7□□□□□ -0.38
LINC01535-202ENST00000587477 A2MP01023 1474 aa12.7□□□□□ -0.38
LINC01535-202ENST00000587477 MED14O60244 1454 aa12.68□□□□□ -0.38
LINC01535-202ENST00000587477 ARHGAP35Q9NRY4 1499 aa12.68□□□□□ -0.38
LINC01535-202ENST00000587477 CDC42BPAQ5VT25 1732 aa12.68□□□□□ -0.38
LINC01535-202ENST00000587477 LRRIQ1Q96JM4 1722 aa12.68□□□□□ -0.38
LINC01535-202ENST00000587477 ATP7AQ04656 1500 aa12.67□□□□□ -0.38
LINC01535-202ENST00000587477 HNRNPMP52272 730 aaKnown RBP eCLIP12.67□□□□□ -0.38
LINC01535-202ENST00000587477 THEMISQ8N1K5 641 aaPredicted RBP12.67□□□□□ -0.38
LINC01535-202ENST00000587477 KIAA1107Q9UPP5 1409 aa12.67□□□□□ -0.38
LINC01535-202ENST00000587477 ZNF777Q9ULD5 760 aaPredicted RBP12.66□□□□□ -0.38
LINC01535-202ENST00000587477 TNRQ92752 1358 aa12.66□□□□□ -0.38
LINC01535-202ENST00000587477 NPHP4O75161 1426 aaPredicted RBP12.65□□□□□ -0.38
LINC01535-202ENST00000587477 DEPDC5O75140 1603 aa12.65□□□□□ -0.38
LINC01535-202ENST00000587477 LRRC7Q96NW7 1537 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms