RNA–Protein interactions for RNA: ENST00000587457.1

PPP6R1-204, Transcript of protein phosphatase 6 regulatory subunit 1, humanhuman

TSL 2

Gene PPP6R1, Length 2,389 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP6R1-204ENST00000587457 DDX10Q13206 875 aaKnown RBP22.34■■□□□ 1.17
PPP6R1-204ENST00000587457 ZNF644Q9H582 1327 aaPredicted RBP22.32■■□□□ 1.16
PPP6R1-204ENST00000587457 CHD1O14646 1710 aa22.31■■□□□ 1.16
PPP6R1-204ENST00000587457 FANCIQ9NVI1 1328 aa22.31■■□□□ 1.16
PPP6R1-204ENST00000587457 ERICH6Q7L0X2 663 aa22.31■■□□□ 1.16
PPP6R1-204ENST00000587457 ABCA8O94911 1581 aa22.3■■□□□ 1.16
PPP6R1-204ENST00000587457 TRIM52Q96A61 297 aa22.3■■□□□ 1.16
PPP6R1-204ENST00000587457 UACAQ9BZF9 1416 aa22.29■■□□□ 1.16
PPP6R1-204ENST00000587457 PTPRGP23470 1445 aa22.28■■□□□ 1.16
PPP6R1-204ENST00000587457 ATP10BO94823 1461 aa22.26■■□□□ 1.15
PPP6R1-204ENST00000587457 PLEKHD1A6NEE1 506 aa22.25■■□□□ 1.15
PPP6R1-204ENST00000587457 CFDP1Q9UEE9 299 aaPredicted RBP22.24■■□□□ 1.15
PPP6R1-204ENST00000587457 KIF14Q15058 1648 aa22.24■■□□□ 1.15
PPP6R1-204ENST00000587457 DAPK1P53355 1430 aa22.24■■□□□ 1.15
PPP6R1-204ENST00000587457 ABCC5O15440 1437 aa22.23■■□□□ 1.15
PPP6R1-204ENST00000587457 GPATCH8Q9UKJ3 1502 aaKnown RBP22.22■■□□□ 1.15
PPP6R1-204ENST00000587457 AKNAQ7Z591 1439 aa22.22■■□□□ 1.15
PPP6R1-204ENST00000587457 ZNF777Q9ULD5 760 aaPredicted RBP22.21■■□□□ 1.15
PPP6R1-204ENST00000587457 PPP1R15AO75807 674 aaPredicted RBP22.19■■□□□ 1.14
PPP6R1-204ENST00000587457 KDM6BO15054 1643 aa22.18■■□□□ 1.14
PPP6R1-204ENST00000587457 CCER2I3L3R5 266 aa22.18■■□□□ 1.14
PPP6R1-204ENST00000587457 ADCY10Q96PN6 1610 aa22.18■■□□□ 1.14
PPP6R1-204ENST00000587457 GCC2Q8IWJ2 1684 aa22.17■■□□□ 1.14
PPP6R1-204ENST00000587457 CAMSAP2Q08AD1 1489 aa22.17■■□□□ 1.14
PPP6R1-204ENST00000587457 DNMT1P26358 1616 aaKnown RBP22.16■■□□□ 1.14
PPP6R1-204ENST00000587457 SHROOM2Q13796 1616 aa22.16■■□□□ 1.14
PPP6R1-204ENST00000587457 MYT1LQ9UL68 1186 aa22.16■■□□□ 1.14
PPP6R1-204ENST00000587457 ERCC6L2Q5T890 1561 aa22.15■■□□□ 1.14
PPP6R1-204ENST00000587457 TIMELESSQ9UNS1 1208 aa22.15■■□□□ 1.14
PPP6R1-204ENST00000587457 ROCK1Q13464 1354 aa22.15■■□□□ 1.14
PPP6R1-204ENST00000587457 DEKP35659 375 aaKnown RBP22.14■■□□□ 1.13
PPP6R1-204ENST00000587457 ANP32CO43423 234 aa22.12■■□□□ 1.13
PPP6R1-204ENST00000587457 ITSN2Q9NZM3 1697 aa22.12■■□□□ 1.13
PPP6R1-204ENST00000587457 ABCC10Q5T3U5 1492 aa22.12■■□□□ 1.13
PPP6R1-204ENST00000587457 TONSLQ96HA7 1378 aa22.1■■□□□ 1.13
PPP6R1-204ENST00000587457 DENND4BO75064 1496 aaPredicted RBP22.09■■□□□ 1.13
PPP6R1-204ENST00000587457 MPHOSPH9Q99550 1183 aa22.08■■□□□ 1.13
PPP6R1-204ENST00000587457 HIRIP3Q9BW71 556 aaPredicted RBP22.07■■□□□ 1.12
PPP6R1-204ENST00000587457 IRX6P78412 446 aaPredicted RBP22.06■■□□□ 1.12
PPP6R1-204ENST00000587457 CLASP1Q7Z460 1538 aa22.05■■□□□ 1.12
PPP6R1-204ENST00000587457 FOXD1Q16676 465 aa22.04■■□□□ 1.12
PPP6R1-204ENST00000587457 NCOA1Q15788 1441 aa22.03■■□□□ 1.12
PPP6R1-204ENST00000587457 CDC42BPAQ5VT25 1732 aa22.02■■□□□ 1.12
PPP6R1-204ENST00000587457 ABCC2Q92887 1545 aa22■■□□□ 1.11
PPP6R1-204ENST00000587457 HNRNPMP52272 730 aaKnown RBP eCLIP21.97■■□□□ 1.113e-7■■■■■ 27.5
PPP6R1-204ENST00000587457 ADGRL2O95490 1459 aa21.97■■□□□ 1.11
PPP6R1-204ENST00000587457 ANKRD30AQ9BXX3 1397 aa21.97■■□□□ 1.11
PPP6R1-204ENST00000587457 SLC4A1APQ9BWU0 796 aaKnown RBP21.96■■□□□ 1.11
PPP6R1-204ENST00000587457 CROCC2H7BZ55 1655 aa21.94■■□□□ 1.1
PPP6R1-204ENST00000587457 C9orf84Q5VXU9 1444 aa21.94■■□□□ 1.1
PPP6R1-204ENST00000587457 ADGBQ8N7X0 1667 aa21.93■■□□□ 1.1
PPP6R1-204ENST00000587457 HNRNPUQ00839 825 aaKnown RBP eCLIP21.92■■□□□ 1.1
PPP6R1-204ENST00000587457 ANO8Q9HCE9 1232 aaPredicted RBP21.92■■□□□ 1.1
PPP6R1-204ENST00000587457 KDM5BQ9UGL1 1544 aa21.92■■□□□ 1.1
PPP6R1-204ENST00000587457 TSPY4P0CV99 314 aa21.92■■□□□ 1.1
PPP6R1-204ENST00000587457 TSPY10P0CW01 314 aa21.92■■□□□ 1.1
PPP6R1-204ENST00000587457 ANKRD30BQ9BXX2 1392 aa21.9■■□□□ 1.1
PPP6R1-204ENST00000587457 MBD5Q9P267 1494 aa21.89■■□□□ 1.1
PPP6R1-204ENST00000587457 SHANK2Q9UPX8 1470 aa21.89■■□□□ 1.1
PPP6R1-204ENST00000587457 ANKRD50Q9ULJ7 1429 aa21.89■■□□□ 1.1
PPP6R1-204ENST00000587457 TTC37Q6PGP7 1564 aa21.89■■□□□ 1.09
PPP6R1-204ENST00000587457 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.89■■□□□ 1.095e-7■■□□□ 14.1
PPP6R1-204ENST00000587457 PPP4R2Q9NY27 417 aa21.89■■□□□ 1.09
PPP6R1-204ENST00000587457 PZPP20742 1482 aa21.88■■□□□ 1.09
PPP6R1-204ENST00000587457 PREX2Q70Z35 1606 aa21.88■■□□□ 1.09
PPP6R1-204ENST00000587457 SAMD9LQ8IVG5 1584 aa21.88■■□□□ 1.09
PPP6R1-204ENST00000587457 NBR1Q14596 966 aa21.88■■□□□ 1.09
PPP6R1-204ENST00000587457 ERICH6BQ5W0A0 696 aa21.87■■□□□ 1.09
PPP6R1-204ENST00000587457 CDC42BPBQ9Y5S2 1711 aa21.86■■□□□ 1.09
PPP6R1-204ENST00000587457 UHRF1BP1LA0JNW5 1464 aa21.86■■□□□ 1.09
PPP6R1-204ENST00000587457 L3MBTL2Q969R5 705 aa21.85■■□□□ 1.09
PPP6R1-204ENST00000587457 NOP58Q9Y2X3 529 aaKnown RBP21.85■■□□□ 1.09
PPP6R1-204ENST00000587457 ARHGAP5Q13017 1502 aa21.85■■□□□ 1.09
PPP6R1-204ENST00000587457 ARHGEF5Q12774 1597 aa21.84■■□□□ 1.09
PPP6R1-204ENST00000587457 CCDC141Q6ZP82 1450 aa21.83■■□□□ 1.09
PPP6R1-204ENST00000587457 KIF15Q9NS87 1388 aa21.83■■□□□ 1.09
PPP6R1-204ENST00000587457 ZCCHC11Q5TAX3 1644 aaKnown RBP21.83■■□□□ 1.09
PPP6R1-204ENST00000587457 RPRD2Q5VT52 1461 aaKnown RBP21.81■■□□□ 1.08
PPP6R1-204ENST00000587457 SYCP2Q9BX26 1530 aa21.8■■□□□ 1.08
PPP6R1-204ENST00000587457 PKD2Q13563 968 aa21.8■■□□□ 1.08
PPP6R1-204ENST00000587457 PAK3O75914 559 aaPredicted RBP21.8■■□□□ 1.08
PPP6R1-204ENST00000587457 RSPH4AQ5TD94 716 aa21.79■■□□□ 1.08
PPP6R1-204ENST00000587457 NUP155O75694 1391 aa21.79■■□□□ 1.08
PPP6R1-204ENST00000587457 B4GALNT3Q6L9W6 998 aa21.78■■□□□ 1.08
PPP6R1-204ENST00000587457 KIAA1107Q9UPP5 1409 aa21.77■■□□□ 1.08
PPP6R1-204ENST00000587457 PLCH2O75038 1416 aa21.74■■□□□ 1.07
PPP6R1-204ENST00000587457 SALL2Q9Y467 1007 aaPredicted RBP21.74■■□□□ 1.07
PPP6R1-204ENST00000587457 MYO5CQ9NQX4 1742 aa21.74■■□□□ 1.07
PPP6R1-204ENST00000587457 TEX14Q8IWB6 1497 aa21.74■■□□□ 1.07
PPP6R1-204ENST00000587457 OSCARQ8IYS5 282 aa21.72■■□□□ 1.07
PPP6R1-204ENST00000587457 ARHGEF12Q9NZN5 1544 aa21.71■■□□□ 1.07
PPP6R1-204ENST00000587457 NBPF8Q3BBV2 869 aa21.71■■□□□ 1.07
PPP6R1-204ENST00000587457 EFCAB2Q5VUJ9 269 aa21.71■■□□□ 1.07
PPP6R1-204ENST00000587457 PLEKHH2Q8IVE3 1493 aa21.7■■□□□ 1.06
PPP6R1-204ENST00000587457 HSPA5P11021 654 aaKnown RBP21.7■■□□□ 1.06
PPP6R1-204ENST00000587457 KDM5DQ9BY66 1539 aa21.67■■□□□ 1.06
PPP6R1-204ENST00000587457 EIF4G2P78344 907 aaKnown RBP eCLIP21.66■■□□□ 1.06
PPP6R1-204ENST00000587457 MAST1Q9Y2H9 1570 aa21.66■■□□□ 1.06
PPP6R1-204ENST00000587457 WDR7Q9Y4E6 1490 aa21.65■■□□□ 1.06
PPP6R1-204ENST00000587457 RTL5Q5HYW3 569 aaPredicted RBP21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 56.2 ms