RNA–Protein interactions for RNA: ENST00000587396.1

CXXC1-210, Transcript of CXXC finger protein 1, humanhuman

TSL 2

Gene CXXC1, Length 476 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXXC1-210ENST00000587396 MAGI2Q86UL8 1455 aa30.34■■■□□ 2.45
CXXC1-210ENST00000587396 FER1L4A9Z1Z3 1794 aa30.32■■■□□ 2.44
CXXC1-210ENST00000587396 ATP1B4Q9UN42 357 aaPredicted RBP30.29■■■□□ 2.44
CXXC1-210ENST00000587396 PLCH2O75038 1416 aa30.29■■■□□ 2.44
CXXC1-210ENST00000587396 ILDR2Q71H61 639 aa30.27■■■□□ 2.44
CXXC1-210ENST00000587396 ATP10AO60312 1499 aa30.26■■■□□ 2.44
CXXC1-210ENST00000587396 ARHGEF12Q9NZN5 1544 aa30.25■■■□□ 2.43
CXXC1-210ENST00000587396 DISP3Q9P2K9 1392 aa30.25■■■□□ 2.43
CXXC1-210ENST00000587396 EHMT2Q96KQ7 1210 aa30.24■■■□□ 2.43
CXXC1-210ENST00000587396 C9orf84Q5VXU9 1444 aa30.22■■■□□ 2.43
CXXC1-210ENST00000587396 EFCAB2Q5VUJ9 269 aa30.21■■■□□ 2.43
CXXC1-210ENST00000587396 EEA1Q15075 1411 aa30.2■■■□□ 2.42
CXXC1-210ENST00000587396 AFAP1Q8N556 730 aa30.17■■■□□ 2.42
CXXC1-210ENST00000587396 MYT1LQ9UL68 1186 aa30.17■■■□□ 2.42
CXXC1-210ENST00000587396 PREX1Q8TCU6 1659 aa30.16■■■□□ 2.42
CXXC1-210ENST00000587396 DMRT2Q9Y5R5 561 aa30.13■■■□□ 2.41
CXXC1-210ENST00000587396 STRCQ7RTU9 1775 aa30.11■■■□□ 2.41
CXXC1-210ENST00000587396 UHRF1BP1Q6BDS2 1440 aa30.11■■■□□ 2.41
CXXC1-210ENST00000587396 SOCS7O14512 581 aa30.08■■■□□ 2.41
CXXC1-210ENST00000587396 KIF14Q15058 1648 aa30.07■■■□□ 2.4
CXXC1-210ENST00000587396 ZNF518AQ6AHZ1 1483 aa30.06■■■□□ 2.4
CXXC1-210ENST00000587396 MYO5CQ9NQX4 1742 aa30.06■■■□□ 2.4
CXXC1-210ENST00000587396 CDK11AQ9UQ88 783 aaPredicted RBP30.05■■■□□ 2.4
CXXC1-210ENST00000587396 UBTFP17480 764 aaKnown RBP30.04■■■□□ 2.4
CXXC1-210ENST00000587396 ARHGAP5Q13017 1502 aa30.04■■■□□ 2.4
CXXC1-210ENST00000587396 FMN1Q68DA7 1419 aa30■■■□□ 2.39
CXXC1-210ENST00000587396 KDM5CP41229 1560 aa29.99■■■□□ 2.39
CXXC1-210ENST00000587396 DIP2CQ9Y2E4 1556 aa29.98■■■□□ 2.39
CXXC1-210ENST00000587396 TROQ12816 1431 aaPredicted RBP29.98■■■□□ 2.39
CXXC1-210ENST00000587396 ARHGAP35Q9NRY4 1499 aa29.97■■■□□ 2.39
CXXC1-210ENST00000587396 ESF1Q9H501 851 aaKnown RBP29.96■■■□□ 2.39
CXXC1-210ENST00000587396 PTPRTO14522 1441 aa29.96■■■□□ 2.39
CXXC1-210ENST00000587396 SETD1BQ9UPS6 1966 aaKnown RBP29.93■■■□□ 2.38
CXXC1-210ENST00000587396 C3P01024 1663 aa29.92■■■□□ 2.38
CXXC1-210ENST00000587396 TRAPPC8Q9Y2L5 1435 aa29.92■■■□□ 2.38
CXXC1-210ENST00000587396 ABCA6Q8N139 1617 aa29.92■■■□□ 2.38
CXXC1-210ENST00000587396 CLIP1P30622 1438 aa29.91■■■□□ 2.38
CXXC1-210ENST00000587396 SPATA31D1Q6ZQQ2 1576 aa29.89■■■□□ 2.38
CXXC1-210ENST00000587396 MLH3Q9UHC1 1453 aa29.88■■■□□ 2.37
CXXC1-210ENST00000587396 LTBP4Q8N2S1 1624 aa29.88■■■□□ 2.37
CXXC1-210ENST00000587396 REREQ9P2R6 1566 aa29.87■■■□□ 2.37
CXXC1-210ENST00000587396 CDC42BPBQ9Y5S2 1711 aa29.84■■■□□ 2.37
CXXC1-210ENST00000587396 AGLP35573 1532 aa29.82■■■□□ 2.36
CXXC1-210ENST00000587396 NCOA1Q15788 1441 aa29.82■■■□□ 2.36
CXXC1-210ENST00000587396 LRRIQ1Q96JM4 1722 aa29.82■■■□□ 2.36
CXXC1-210ENST00000587396 ABCC1P33527 1531 aa29.8■■■□□ 2.36
CXXC1-210ENST00000587396 NCKAP5LQ9HCH0 1330 aa29.78■■■□□ 2.36
CXXC1-210ENST00000587396 ZNF777Q9ULD5 760 aaPredicted RBP29.76■■■□□ 2.35
CXXC1-210ENST00000587396 CNTLNQ9NXG0 1405 aa29.75■■■□□ 2.35
CXXC1-210ENST00000587396 PREX2Q70Z35 1606 aa29.74■■■□□ 2.35
CXXC1-210ENST00000587396 KIDINS220Q9ULH0 1771 aa29.74■■■□□ 2.35
CXXC1-210ENST00000587396 CAMSAP1Q5T5Y3 1602 aa29.74■■■□□ 2.35
CXXC1-210ENST00000587396 ZNF335Q9H4Z2 1342 aaPredicted RBP29.73■■■□□ 2.35
CXXC1-210ENST00000587396 ITSN2Q9NZM3 1697 aa29.73■■■□□ 2.35
CXXC1-210ENST00000587396 ZMYM3Q14202 1370 aa29.71■■■□□ 2.35
CXXC1-210ENST00000587396 IQSEC2Q5JU85 1478 aa29.71■■■□□ 2.35
CXXC1-210ENST00000587396 UBAP1LF5GYI3 381 aa29.7■■■□□ 2.35
CXXC1-210ENST00000587396 HNRNPMP52272 730 aaKnown RBP eCLIP29.67■■■□□ 2.34
CXXC1-210ENST00000587396 NPATQ14207 1427 aa29.66■■■□□ 2.34
CXXC1-210ENST00000587396 SAMD9LQ8IVG5 1584 aa29.65■■■□□ 2.34
CXXC1-210ENST00000587396 SPAG9O60271 1321 aaKnown RBP29.65■■■□□ 2.34
CXXC1-210ENST00000587396 CASKIN1Q8WXD9 1431 aa29.63■■■□□ 2.33
CXXC1-210ENST00000587396 CDC42BPAQ5VT25 1732 aa29.62■■■□□ 2.33
CXXC1-210ENST00000587396 CCDC18Q5T9S5 1454 aa29.61■■■□□ 2.33
CXXC1-210ENST00000587396 SYCP2Q9BX26 1530 aa29.6■■■□□ 2.33
CXXC1-210ENST00000587396 SUPT6HQ7KZ85 1726 aaKnown RBP29.59■■■□□ 2.33
CXXC1-210ENST00000587396 GGT6Q6P531 493 aa29.58■■■□□ 2.33
CXXC1-210ENST00000587396 MROH2AA6NES4 1674 aa29.57■■■□□ 2.32
CXXC1-210ENST00000587396 PKD2Q13563 968 aa29.56■■■□□ 2.32
CXXC1-210ENST00000587396 GPATCH8Q9UKJ3 1502 aaKnown RBP29.55■■■□□ 2.32
CXXC1-210ENST00000587396 CLTCQ00610 1675 aaKnown RBP29.54■■■□□ 2.32
CXXC1-210ENST00000587396 PTPRKQ15262 1439 aa29.54■■■□□ 2.32
CXXC1-210ENST00000587396 A2MP01023 1474 aa29.5■■■□□ 2.31
CXXC1-210ENST00000587396 MYO3AQ8NEV4 1616 aa29.5■■■□□ 2.31
CXXC1-210ENST00000587396 CHIC1Q5VXU3 224 aa29.5■■■□□ 2.31
CXXC1-210ENST00000587396 PPP6R1Q9UPN7 881 aa29.5■■■□□ 2.31
CXXC1-210ENST00000587396 ATP7AQ04656 1500 aa29.5■■■□□ 2.31
CXXC1-210ENST00000587396 PLA2R1Q13018 1463 aa29.49■■■□□ 2.31
CXXC1-210ENST00000587396 TCOF1Q13428 1488 aaKnown RBP29.49■■■□□ 2.31
CXXC1-210ENST00000587396 SCAF1Q9H7N4 1312 aaKnown RBP29.49■■■□□ 2.31
CXXC1-210ENST00000587396 CEP170BQ9Y4F5 1589 aaPredicted RBP29.49■■■□□ 2.31
CXXC1-210ENST00000587396 CFDP1Q9UEE9 299 aaPredicted RBP29.49■■■□□ 2.31
CXXC1-210ENST00000587396 PIP4K2BP78356 416 aa29.47■■■□□ 2.31
CXXC1-210ENST00000587396 ZNF142P52746 1687 aaPredicted RBP29.45■■■□□ 2.31
CXXC1-210ENST00000587396 PLXNC1O60486 1568 aa29.45■■■□□ 2.31
CXXC1-210ENST00000587396 HSPA1LP34931 641 aa29.44■■■□□ 2.3
CXXC1-210ENST00000587396 FYCO1Q9BQS8 1478 aa29.43■■■□□ 2.3
CXXC1-210ENST00000587396 KIAA1107Q9UPP5 1409 aa29.43■■■□□ 2.3
CXXC1-210ENST00000587396 INO80Q9ULG1 1556 aaPredicted RBP29.42■■■□□ 2.3
CXXC1-210ENST00000587396 ZNF644Q9H582 1327 aaPredicted RBP29.41■■■□□ 2.3
CXXC1-210ENST00000587396 CCNB3Q8WWL7 1395 aa29.4■■■□□ 2.3
CXXC1-210ENST00000587396 PLEKHH2Q8IVE3 1493 aa29.37■■■□□ 2.29
CXXC1-210ENST00000587396 FBXO31Q5XUX0 539 aaPredicted RBP29.37■■■□□ 2.29
CXXC1-210ENST00000587396 A2ML1A8K2U0 1454 aa29.36■■■□□ 2.29
CXXC1-210ENST00000587396 DNMT1P26358 1616 aaKnown RBP29.33■■■□□ 2.29
CXXC1-210ENST00000587396 TOM1O60784 492 aa29.31■■■□□ 2.28
CXXC1-210ENST00000587396 MED1Q15648 1581 aaPredicted RBP29.3■■■□□ 2.28
CXXC1-210ENST00000587396 MTUS2Q5JR59 1369 aa29.29■■■□□ 2.28
CXXC1-210ENST00000587396 TNRQ92752 1358 aa29.27■■■□□ 2.28
CXXC1-210ENST00000587396 ADGBQ8N7X0 1667 aa29.26■■■□□ 2.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms