RNA–Protein interactions for RNA: ENST00000587257.1

LRFN3-203, Transcript of leucine rich repeat and fibronectin type III domain containing 3, humanhuman

TSL 4

Gene LRFN3, Length 529 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3-203ENST00000587257 CERKQ8TCT0 537 aa24.62■■□□□ 1.53
LRFN3-203ENST00000587257 PLCH2O75038 1416 aa24.61■■□□□ 1.53
LRFN3-203ENST00000587257 FER1L4A9Z1Z3 1794 aa24.58■■□□□ 1.53
LRFN3-203ENST00000587257 C9orf84Q5VXU9 1444 aa24.57■■□□□ 1.52
LRFN3-203ENST00000587257 ATP10AO60312 1499 aa24.57■■□□□ 1.52
LRFN3-203ENST00000587257 ARHGEF12Q9NZN5 1544 aa24.56■■□□□ 1.52
LRFN3-203ENST00000587257 EFCAB2Q5VUJ9 269 aa24.53■■□□□ 1.52
LRFN3-203ENST00000587257 FMN1Q68DA7 1419 aa24.49■■□□□ 1.51
LRFN3-203ENST00000587257 ZNF518AQ6AHZ1 1483 aa24.48■■□□□ 1.51
LRFN3-203ENST00000587257 PREX1Q8TCU6 1659 aa24.48■■□□□ 1.51
LRFN3-203ENST00000587257 ATP1B4Q9UN42 357 aaPredicted RBP24.48■■□□□ 1.51
LRFN3-203ENST00000587257 CDK11AQ9UQ88 783 aaPredicted RBP24.48■■□□□ 1.51
LRFN3-203ENST00000587257 CEBPAP49715 358 aaPredicted RBP24.46■■□□□ 1.51
LRFN3-203ENST00000587257 MYO5CQ9NQX4 1742 aa24.45■■□□□ 1.5
LRFN3-203ENST00000587257 DMRT2Q9Y5R5 561 aa24.44■■□□□ 1.5
LRFN3-203ENST00000587257 UHRF1BP1Q6BDS2 1440 aa24.44■■□□□ 1.5
LRFN3-203ENST00000587257 KIF14Q15058 1648 aa24.43■■□□□ 1.5
LRFN3-203ENST00000587257 ARHGAP5Q13017 1502 aa24.42■■□□□ 1.5
LRFN3-203ENST00000587257 KDM5CP41229 1560 aa24.42■■□□□ 1.5
LRFN3-203ENST00000587257 TROQ12816 1431 aaPredicted RBP24.41■■□□□ 1.5
LRFN3-203ENST00000587257 CLIP1P30622 1438 aa24.4■■□□□ 1.5
LRFN3-203ENST00000587257 AFAP1Q8N556 730 aa24.39■■□□□ 1.49
LRFN3-203ENST00000587257 MYT1LQ9UL68 1186 aa24.39■■□□□ 1.49
LRFN3-203ENST00000587257 UBTFP17480 764 aaKnown RBP24.38■■□□□ 1.49
LRFN3-203ENST00000587257 ARHGAP35Q9NRY4 1499 aa24.37■■□□□ 1.49
LRFN3-203ENST00000587257 DISP3Q9P2K9 1392 aa24.36■■□□□ 1.49
LRFN3-203ENST00000587257 REREQ9P2R6 1566 aa24.35■■□□□ 1.49
LRFN3-203ENST00000587257 DIP2CQ9Y2E4 1556 aa24.35■■□□□ 1.49
LRFN3-203ENST00000587257 EHMT2Q96KQ7 1210 aa24.33■■□□□ 1.49
LRFN3-203ENST00000587257 STRCQ7RTU9 1775 aa24.33■■□□□ 1.49
LRFN3-203ENST00000587257 MLH3Q9UHC1 1453 aa24.32■■□□□ 1.48
LRFN3-203ENST00000587257 PTPRTO14522 1441 aa24.3■■□□□ 1.48
LRFN3-203ENST00000587257 ESF1Q9H501 851 aaKnown RBP24.3■■□□□ 1.48
LRFN3-203ENST00000587257 AGLP35573 1532 aa24.29■■□□□ 1.48
LRFN3-203ENST00000587257 ABCA6Q8N139 1617 aa24.28■■□□□ 1.48
LRFN3-203ENST00000587257 ABCC1P33527 1531 aa24.25■■□□□ 1.47
LRFN3-203ENST00000587257 ILDR2Q71H61 639 aa24.25■■□□□ 1.47
LRFN3-203ENST00000587257 TRAPPC8Q9Y2L5 1435 aa24.25■■□□□ 1.47
LRFN3-203ENST00000587257 C3P01024 1663 aa24.24■■□□□ 1.47
LRFN3-203ENST00000587257 SOCS7O14512 581 aa24.23■■□□□ 1.47
LRFN3-203ENST00000587257 CNTLNQ9NXG0 1405 aa24.23■■□□□ 1.47
LRFN3-203ENST00000587257 SETD1BQ9UPS6 1966 aaKnown RBP24.22■■□□□ 1.47
LRFN3-203ENST00000587257 PREX2Q70Z35 1606 aa24.22■■□□□ 1.47
LRFN3-203ENST00000587257 CDC42BPBQ9Y5S2 1711 aa24.2■■□□□ 1.46
LRFN3-203ENST00000587257 CCDC18Q5T9S5 1454 aa24.19■■□□□ 1.46
LRFN3-203ENST00000587257 NCOA1Q15788 1441 aa24.19■■□□□ 1.46
LRFN3-203ENST00000587257 SPATA31D1Q6ZQQ2 1576 aa24.18■■□□□ 1.46
LRFN3-203ENST00000587257 LTBP4Q8N2S1 1624 aa24.17■■□□□ 1.46
LRFN3-203ENST00000587257 LRRIQ1Q96JM4 1722 aa24.17■■□□□ 1.46
LRFN3-203ENST00000587257 IQSEC2Q5JU85 1478 aa24.17■■□□□ 1.46
LRFN3-203ENST00000587257 ITSN2Q9NZM3 1697 aa24.17■■□□□ 1.46
LRFN3-203ENST00000587257 NPATQ14207 1427 aa24.15■■□□□ 1.46
LRFN3-203ENST00000587257 CASKIN1Q8WXD9 1431 aa24.15■■□□□ 1.46
LRFN3-203ENST00000587257 KIDINS220Q9ULH0 1771 aa24.13■■□□□ 1.45
LRFN3-203ENST00000587257 SAMD9LQ8IVG5 1584 aa24.09■■□□□ 1.45
LRFN3-203ENST00000587257 CAMSAP1Q5T5Y3 1602 aa24.09■■□□□ 1.45
LRFN3-203ENST00000587257 ZMYM3Q14202 1370 aa24.07■■□□□ 1.44
LRFN3-203ENST00000587257 ZNF777Q9ULD5 760 aaPredicted RBP24.07■■□□□ 1.44
LRFN3-203ENST00000587257 MROH2AA6NES4 1674 aa24.07■■□□□ 1.44
LRFN3-203ENST00000587257 SPAG9O60271 1321 aaKnown RBP24.07■■□□□ 1.44
LRFN3-203ENST00000587257 SYCP2Q9BX26 1530 aa24.05■■□□□ 1.44
LRFN3-203ENST00000587257 CDC42BPAQ5VT25 1732 aa24.05■■□□□ 1.44
LRFN3-203ENST00000587257 FYCO1Q9BQS8 1478 aa24.05■■□□□ 1.44
LRFN3-203ENST00000587257 NCKAP5LQ9HCH0 1330 aa24.02■■□□□ 1.44
LRFN3-203ENST00000587257 GPATCH8Q9UKJ3 1502 aaKnown RBP24.01■■□□□ 1.43
LRFN3-203ENST00000587257 PLA2R1Q13018 1463 aa24■■□□□ 1.43
LRFN3-203ENST00000587257 ATP7AQ04656 1500 aa24■■□□□ 1.43
LRFN3-203ENST00000587257 ZNF335Q9H4Z2 1342 aaPredicted RBP24■■□□□ 1.43
LRFN3-203ENST00000587257 HNRNPMP52272 730 aaKnown RBP eCLIP23.99■■□□□ 1.43
LRFN3-203ENST00000587257 KIAA1107Q9UPP5 1409 aa23.99■■□□□ 1.43
LRFN3-203ENST00000587257 PLEKHH2Q8IVE3 1493 aa23.99■■□□□ 1.43
LRFN3-203ENST00000587257 PLXNC1O60486 1568 aa23.99■■□□□ 1.43
LRFN3-203ENST00000587257 PKD2Q13563 968 aa23.98■■□□□ 1.43
LRFN3-203ENST00000587257 A2MP01023 1474 aa23.98■■□□□ 1.43
LRFN3-203ENST00000587257 UBAP1LF5GYI3 381 aa23.97■■□□□ 1.43
LRFN3-203ENST00000587257 CHIC1Q5VXU3 224 aa23.97■■□□□ 1.43
LRFN3-203ENST00000587257 MYO3AQ8NEV4 1616 aa23.97■■□□□ 1.43
LRFN3-203ENST00000587257 PTPRKQ15262 1439 aa23.96■■□□□ 1.43
LRFN3-203ENST00000587257 SUPT6HQ7KZ85 1726 aaKnown RBP23.96■■□□□ 1.43
LRFN3-203ENST00000587257 ZNF142P52746 1687 aaPredicted RBP23.95■■□□□ 1.43
LRFN3-203ENST00000587257 INO80Q9ULG1 1556 aaPredicted RBP23.95■■□□□ 1.43
LRFN3-203ENST00000587257 CEP170BQ9Y4F5 1589 aaPredicted RBP23.95■■□□□ 1.43
LRFN3-203ENST00000587257 CFDP1Q9UEE9 299 aaPredicted RBP23.95■■□□□ 1.42
LRFN3-203ENST00000587257 TCOF1Q13428 1488 aaKnown RBP23.94■■□□□ 1.42
LRFN3-203ENST00000587257 CLTCQ00610 1675 aaKnown RBP23.94■■□□□ 1.42
LRFN3-203ENST00000587257 CCNB3Q8WWL7 1395 aa23.92■■□□□ 1.42
LRFN3-203ENST00000587257 GGT6Q6P531 493 aa23.92■■□□□ 1.42
LRFN3-203ENST00000587257 PPP6R1Q9UPN7 881 aa23.9■■□□□ 1.42
LRFN3-203ENST00000587257 MTUS2Q5JR59 1369 aa23.86■■□□□ 1.41
LRFN3-203ENST00000587257 A2ML1A8K2U0 1454 aa23.84■■□□□ 1.41
LRFN3-203ENST00000587257 ADGBQ8N7X0 1667 aa23.82■■□□□ 1.4
LRFN3-203ENST00000587257 RTEL1-TNFRSF6BF6WH68 1400 aa23.78■■□□□ 1.4
LRFN3-203ENST00000587257 DNMT1P26358 1616 aaKnown RBP23.78■■□□□ 1.4
LRFN3-203ENST00000587257 ZNF644Q9H582 1327 aaPredicted RBP23.78■■□□□ 1.4
LRFN3-203ENST00000587257 MBD5Q9P267 1494 aa23.77■■□□□ 1.4
LRFN3-203ENST00000587257 SCAF1Q9H7N4 1312 aaKnown RBP23.77■■□□□ 1.4
LRFN3-203ENST00000587257 TNRQ92752 1358 aa23.77■■□□□ 1.4
LRFN3-203ENST00000587257 CPS1P31327 1500 aa23.76■■□□□ 1.39
LRFN3-203ENST00000587257 TIAM1Q13009 1591 aa23.76■■□□□ 1.39
LRFN3-203ENST00000587257 DHX29Q7Z478 1369 aaKnown RBP23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms