RNA–Protein interactions for RNA: ENST00000586958.1

SPRED3-203, Transcript of sprouty related EVH1 domain containing 3, humanhuman

TSL 2

Gene SPRED3, Length 478 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPRED3-203ENST00000586958 NCOA1Q15788 1441 aa22.34■■□□□ 1.17
SPRED3-203ENST00000586958 SCAF1Q9H7N4 1312 aaKnown RBP22.33■■□□□ 1.17
SPRED3-203ENST00000586958 SUPT5HO00267 1087 aaKnown RBP22.33■■□□□ 1.17
SPRED3-203ENST00000586958 MAGI2Q86UL8 1455 aa22.33■■□□□ 1.16
SPRED3-203ENST00000586958 PIP4K2BP78356 416 aa22.3■■□□□ 1.16
SPRED3-203ENST00000586958 SETD1BQ9UPS6 1966 aaKnown RBP22.29■■□□□ 1.16
SPRED3-203ENST00000586958 HECW1Q76N89 1606 aa22.27■■□□□ 1.16
SPRED3-203ENST00000586958 ATP10AO60312 1499 aa22.24■■□□□ 1.15
SPRED3-203ENST00000586958 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP22.24■■□□□ 1.15
SPRED3-203ENST00000586958 HNRNPUL2Q1KMD3 747 aaKnown RBP22.24■■□□□ 1.15
SPRED3-203ENST00000586958 C9orf84Q5VXU9 1444 aa22.23■■□□□ 1.15
SPRED3-203ENST00000586958 NCKAP5LQ9HCH0 1330 aa22.22■■□□□ 1.15
SPRED3-203ENST00000586958 FAM9AQ8IZU1 332 aaPredicted RBP22.19■■□□□ 1.14
SPRED3-203ENST00000586958 TRAPPC8Q9Y2L5 1435 aa22.19■■□□□ 1.14
SPRED3-203ENST00000586958 RGS17Q9UGC6 210 aaPredicted RBP22.18■■□□□ 1.14
SPRED3-203ENST00000586958 CAMSAP1Q5T5Y3 1602 aa22.17■■□□□ 1.14
SPRED3-203ENST00000586958 CFAP74Q9C0B2 1584 aa22.17■■□□□ 1.14
SPRED3-203ENST00000586958 TOM1O60784 492 aa22.17■■□□□ 1.14
SPRED3-203ENST00000586958 P3H3Q8IVL6 736 aa22.17■■□□□ 1.14
SPRED3-203ENST00000586958 SCAPERQ9BY12 1400 aa22.14■■□□□ 1.13
SPRED3-203ENST00000586958 C3P01024 1663 aa22.13■■□□□ 1.13
SPRED3-203ENST00000586958 CTTNBP2Q8WZ74 1663 aa22.12■■□□□ 1.13
SPRED3-203ENST00000586958 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP22.07■■□□□ 1.12
SPRED3-203ENST00000586958 PLEKHD1A6NEE1 506 aa22.06■■□□□ 1.12
SPRED3-203ENST00000586958 PKD2Q13563 968 aa22.05■■□□□ 1.12
SPRED3-203ENST00000586958 ESF1Q9H501 851 aaKnown RBP22.05■■□□□ 1.12
SPRED3-203ENST00000586958 SENP3Q9H4L4 574 aaPredicted RBP22.04■■□□□ 1.12
SPRED3-203ENST00000586958 RAPGEF6Q8TEU7 1601 aa22.02■■□□□ 1.12
SPRED3-203ENST00000586958 PPP6R1Q9UPN7 881 aa22.02■■□□□ 1.12
SPRED3-203ENST00000586958 NUP153P49790 1475 aaKnown RBP22.01■■□□□ 1.11
SPRED3-203ENST00000586958 POTEAQ6S8J7 498 aa21.98■■□□□ 1.11
SPRED3-203ENST00000586958 TCOF1Q13428 1488 aaKnown RBP21.97■■□□□ 1.11
SPRED3-203ENST00000586958 PLA2R1Q13018 1463 aa21.96■■□□□ 1.11
SPRED3-203ENST00000586958 ALKQ9UM73 1620 aa21.95■■□□□ 1.1
SPRED3-203ENST00000586958 NPATQ14207 1427 aa21.94■■□□□ 1.1
SPRED3-203ENST00000586958 PLCH2O75038 1416 aa21.93■■□□□ 1.1
SPRED3-203ENST00000586958 MYT1LQ9UL68 1186 aa21.93■■□□□ 1.1
SPRED3-203ENST00000586958 CPS1P31327 1500 aa21.92■■□□□ 1.1
SPRED3-203ENST00000586958 PTPRKQ15262 1439 aa21.92■■□□□ 1.1
SPRED3-203ENST00000586958 AFAP1Q8N556 730 aa21.92■■□□□ 1.1
SPRED3-203ENST00000586958 AGLP35573 1532 aa21.9■■□□□ 1.1
SPRED3-203ENST00000586958 CNTLNQ9NXG0 1405 aa21.9■■□□□ 1.1
SPRED3-203ENST00000586958 DIP2CQ9Y2E4 1556 aa21.9■■□□□ 1.1
SPRED3-203ENST00000586958 REREQ9P2R6 1566 aa21.88■■□□□ 1.09
SPRED3-203ENST00000586958 ZNF518AQ6AHZ1 1483 aa21.87■■□□□ 1.09
SPRED3-203ENST00000586958 SHANK2Q9UPX8 1470 aa21.87■■□□□ 1.09
SPRED3-203ENST00000586958 EFCAB2Q5VUJ9 269 aa21.86■■□□□ 1.09
SPRED3-203ENST00000586958 ZMYM3Q14202 1370 aa21.85■■□□□ 1.09
SPRED3-203ENST00000586958 KDM5CP41229 1560 aa21.83■■□□□ 1.09
SPRED3-203ENST00000586958 SETD1AO15047 1707 aaKnown RBP21.8■■□□□ 1.08
SPRED3-203ENST00000586958 SAMD9Q5K651 1589 aa21.8■■□□□ 1.08
SPRED3-203ENST00000586958 CEP170BQ9Y4F5 1589 aaPredicted RBP21.8■■□□□ 1.08
SPRED3-203ENST00000586958 ABCA6Q8N139 1617 aa21.8■■□□□ 1.08
SPRED3-203ENST00000586958 ZNF142P52746 1687 aaPredicted RBP21.79■■□□□ 1.08
SPRED3-203ENST00000586958 MYO3AQ8NEV4 1616 aa21.79■■□□□ 1.08
SPRED3-203ENST00000586958 UPF1Q92900 1129 aaKnown RBP eCLIP21.77■■□□□ 1.08
SPRED3-203ENST00000586958 PRXQ9BXM0 1461 aa21.77■■□□□ 1.07
SPRED3-203ENST00000586958 MLH3Q9UHC1 1453 aa21.75■■□□□ 1.07
SPRED3-203ENST00000586958 SUPT6HQ7KZ85 1726 aaKnown RBP21.75■■□□□ 1.07
SPRED3-203ENST00000586958 MROH2AA6NES4 1674 aa21.73■■□□□ 1.07
SPRED3-203ENST00000586958 SRCAPQ6ZRS2 3230 aa21.72■■□□□ 1.07
SPRED3-203ENST00000586958 VWDEQ8N2E2 1590 aa21.7■■□□□ 1.06
SPRED3-203ENST00000586958 NEURL4Q96JN8 1562 aa21.69■■□□□ 1.06
SPRED3-203ENST00000586958 CDK13Q14004 1512 aaKnown RBP21.65■■□□□ 1.06
SPRED3-203ENST00000586958 A2ML1A8K2U0 1454 aa21.64■■□□□ 1.06
SPRED3-203ENST00000586958 MYO5CQ9NQX4 1742 aa21.64■■□□□ 1.06
SPRED3-203ENST00000586958 RANGAP1P46060 587 aaPredicted RBP21.64■■□□□ 1.05
SPRED3-203ENST00000586958 DNMT1P26358 1616 aaKnown RBP21.63■■□□□ 1.05
SPRED3-203ENST00000586958 ARHGAP5Q13017 1502 aa21.63■■□□□ 1.05
SPRED3-203ENST00000586958 LRRC7Q96NW7 1537 aa21.62■■□□□ 1.05
SPRED3-203ENST00000586958 RNF17Q9BXT8 1623 aaKnown RBP21.59■■□□□ 1.05
SPRED3-203ENST00000586958 POLR1AO95602 1720 aaPredicted RBP21.58■■□□□ 1.05
SPRED3-203ENST00000586958 CLTCQ00610 1675 aaKnown RBP21.58■■□□□ 1.05
SPRED3-203ENST00000586958 ANKLE2Q86XL3 938 aa21.57■■□□□ 1.04
SPRED3-203ENST00000586958 KIDINS220Q9ULH0 1771 aa21.55■■□□□ 1.04
SPRED3-203ENST00000586958 NPHP4O75161 1426 aaPredicted RBP21.54■■□□□ 1.04
SPRED3-203ENST00000586958 KIF14Q15058 1648 aa21.52■■□□□ 1.04
SPRED3-203ENST00000586958 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.52■■□□□ 1.04
SPRED3-203ENST00000586958 TRIM52Q96A61 297 aa21.52■■□□□ 1.04
SPRED3-203ENST00000586958 STRCP1A6NGW2 1772 aa21.5■■□□□ 1.03
SPRED3-203ENST00000586958 GGT6Q6P531 493 aa21.49■■□□□ 1.03
SPRED3-203ENST00000586958 MED14O60244 1454 aa21.48■■□□□ 1.03
SPRED3-203ENST00000586958 ABCC1P33527 1531 aa21.48■■□□□ 1.03
SPRED3-203ENST00000586958 FAM135BQ49AJ0 1406 aa21.47■■□□□ 1.03
SPRED3-203ENST00000586958 SYNMO15061 1565 aa21.45■■□□□ 1.02
SPRED3-203ENST00000586958 FBXO31Q5XUX0 539 aaPredicted RBP21.43■■□□□ 1.02
SPRED3-203ENST00000586958 TNRQ92752 1358 aa21.43■■□□□ 1.02
SPRED3-203ENST00000586958 THEMISQ8N1K5 641 aaPredicted RBP21.42■■□□□ 1.02
SPRED3-203ENST00000586958 ATP1B4Q9UN42 357 aaPredicted RBP21.42■■□□□ 1.02
SPRED3-203ENST00000586958 CDK11AQ9UQ88 783 aaPredicted RBP21.42■■□□□ 1.02
SPRED3-203ENST00000586958 ITSN2Q9NZM3 1697 aa21.41■■□□□ 1.02
SPRED3-203ENST00000586958 DEPDC5O75140 1603 aa21.4■■□□□ 1.02
SPRED3-203ENST00000586958 TROQ12816 1431 aaPredicted RBP21.39■■□□□ 1.02
SPRED3-203ENST00000586958 CDC42BPBQ9Y5S2 1711 aa21.39■■□□□ 1.01
SPRED3-203ENST00000586958 SAMD9LQ8IVG5 1584 aa21.38■■□□□ 1.01
SPRED3-203ENST00000586958 IQGAP1P46940 1657 aa21.37■■□□□ 1.01
SPRED3-203ENST00000586958 SPAG9O60271 1321 aaKnown RBP21.37■■□□□ 1.01
SPRED3-203ENST00000586958 PLXNC1O60486 1568 aa21.36■■□□□ 1.01
SPRED3-203ENST00000586958 A2MP01023 1474 aa21.35■■□□□ 1.01
SPRED3-203ENST00000586958 ZNF772Q68DY9 489 aaPredicted RBP21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms