RNA–Protein interactions for RNA: ENST00000586577.1

CNN1-205, Transcript of calponin 1, humanhuman

TSL 3

Gene CNN1, Length 685 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNN1-205ENST00000586577 FER1L4A9Z1Z3 1794 aa21.05■□□□□ 0.96
CNN1-205ENST00000586577 ZMYM4Q5VZL5 1548 aa21.04■□□□□ 0.96
CNN1-205ENST00000586577 MLECQ14165 292 aa21.03■□□□□ 0.96
CNN1-205ENST00000586577 TTC37Q6PGP7 1564 aa21.02■□□□□ 0.95
CNN1-205ENST00000586577 CDK13Q14004 1512 aaKnown RBP21■□□□□ 0.95
CNN1-205ENST00000586577 YEATS2Q9ULM3 1422 aa21■□□□□ 0.95
CNN1-205ENST00000586577 PREX1Q8TCU6 1659 aa20.99■□□□□ 0.95
CNN1-205ENST00000586577 LRRIQ1Q96JM4 1722 aa20.99■□□□□ 0.95
CNN1-205ENST00000586577 FMN1Q68DA7 1419 aa20.97■□□□□ 0.95
CNN1-205ENST00000586577 HECW1Q76N89 1606 aa20.95■□□□□ 0.94
CNN1-205ENST00000586577 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.94■□□□□ 0.94
CNN1-205ENST00000586577 SPATA31D1Q6ZQQ2 1576 aa20.94■□□□□ 0.94
CNN1-205ENST00000586577 SIGLEC1Q9BZZ2 1709 aa20.94■□□□□ 0.94
CNN1-205ENST00000586577 CLIP1P30622 1438 aa20.93■□□□□ 0.94
CNN1-205ENST00000586577 SETD1BQ9UPS6 1966 aaKnown RBP20.92■□□□□ 0.94
CNN1-205ENST00000586577 ARHGEF12Q9NZN5 1544 aa20.92■□□□□ 0.94
CNN1-205ENST00000586577 ATP10AO60312 1499 aa20.91■□□□□ 0.94
CNN1-205ENST00000586577 UHRF1BP1Q6BDS2 1440 aa20.9■□□□□ 0.94
CNN1-205ENST00000586577 C9orf84Q5VXU9 1444 aa20.89■□□□□ 0.94
CNN1-205ENST00000586577 SCAPERQ9BY12 1400 aa20.89■□□□□ 0.94
CNN1-205ENST00000586577 STRCQ7RTU9 1775 aa20.89■□□□□ 0.93
CNN1-205ENST00000586577 LOC105371045A0A1W2PR82 267 aa20.86■□□□□ 0.93
CNN1-205ENST00000586577 CEBPAP49715 358 aaPredicted RBP20.86■□□□□ 0.93
CNN1-205ENST00000586577 ATP1B4Q9UN42 357 aaPredicted RBP20.85■□□□□ 0.93
CNN1-205ENST00000586577 PTPRTO14522 1441 aa20.85■□□□□ 0.93
CNN1-205ENST00000586577 CASKIN1Q8WXD9 1431 aa20.85■□□□□ 0.93
CNN1-205ENST00000586577 PLCH2O75038 1416 aa20.84■□□□□ 0.93
CNN1-205ENST00000586577 CEP162Q5TB80 1403 aa20.83■□□□□ 0.93
CNN1-205ENST00000586577 EFCAB2Q5VUJ9 269 aa20.81■□□□□ 0.92
CNN1-205ENST00000586577 KIF14Q15058 1648 aa20.81■□□□□ 0.92
CNN1-205ENST00000586577 IQSEC2Q5JU85 1478 aa20.81■□□□□ 0.92
CNN1-205ENST00000586577 FYCO1Q9BQS8 1478 aa20.79■□□□□ 0.92
CNN1-205ENST00000586577 ESF1Q9H501 851 aaKnown RBP20.78■□□□□ 0.92
CNN1-205ENST00000586577 MYT1LQ9UL68 1186 aa20.78■□□□□ 0.92
CNN1-205ENST00000586577 ZNF518AQ6AHZ1 1483 aa20.77■□□□□ 0.92
CNN1-205ENST00000586577 TROQ12816 1431 aaPredicted RBP20.75■□□□□ 0.91
CNN1-205ENST00000586577 MYO5CQ9NQX4 1742 aa20.75■□□□□ 0.91
CNN1-205ENST00000586577 CCDC18Q5T9S5 1454 aa20.74■□□□□ 0.91
CNN1-205ENST00000586577 CDK11AQ9UQ88 783 aaPredicted RBP20.73■□□□□ 0.91
CNN1-205ENST00000586577 LTBP4Q8N2S1 1624 aa20.71■□□□□ 0.91
CNN1-205ENST00000586577 TRAPPC8Q9Y2L5 1435 aa20.7■□□□□ 0.9
CNN1-205ENST00000586577 C3P01024 1663 aa20.7■□□□□ 0.9
CNN1-205ENST00000586577 KDM5CP41229 1560 aa20.68■□□□□ 0.9
CNN1-205ENST00000586577 REREQ9P2R6 1566 aa20.68■□□□□ 0.9
CNN1-205ENST00000586577 AFAP1Q8N556 730 aa20.68■□□□□ 0.9
CNN1-205ENST00000586577 NCOA1Q15788 1441 aa20.67■□□□□ 0.9
CNN1-205ENST00000586577 ARHGAP5Q13017 1502 aa20.66■□□□□ 0.9
CNN1-205ENST00000586577 DIP2CQ9Y2E4 1556 aa20.65■□□□□ 0.9
CNN1-205ENST00000586577 CNTLNQ9NXG0 1405 aa20.64■□□□□ 0.89
CNN1-205ENST00000586577 CDC42BPBQ9Y5S2 1711 aa20.64■□□□□ 0.89
CNN1-205ENST00000586577 AGLP35573 1532 aa20.63■□□□□ 0.89
CNN1-205ENST00000586577 UBAP1LF5GYI3 381 aa20.63■□□□□ 0.89
CNN1-205ENST00000586577 MLH3Q9UHC1 1453 aa20.62■□□□□ 0.89
CNN1-205ENST00000586577 CDC42BPAQ5VT25 1732 aa20.61■□□□□ 0.89
CNN1-205ENST00000586577 PREX2Q70Z35 1606 aa20.6■□□□□ 0.89
CNN1-205ENST00000586577 CAMSAP1Q5T5Y3 1602 aa20.58■□□□□ 0.89
CNN1-205ENST00000586577 ABCA6Q8N139 1617 aa20.58■□□□□ 0.89
CNN1-205ENST00000586577 NPATQ14207 1427 aa20.57■□□□□ 0.88
CNN1-205ENST00000586577 VPS8Q8N3P4 1428 aa20.57■□□□□ 0.88
CNN1-205ENST00000586577 PKD2Q13563 968 aa20.54■□□□□ 0.88
CNN1-205ENST00000586577 ZNF335Q9H4Z2 1342 aaPredicted RBP20.53■□□□□ 0.88
CNN1-205ENST00000586577 MROH2AA6NES4 1674 aa20.52■□□□□ 0.88
CNN1-205ENST00000586577 TIAM1Q13009 1591 aa20.52■□□□□ 0.88
CNN1-205ENST00000586577 EHBP1L1Q8N3D4 1523 aa20.52■□□□□ 0.87
CNN1-205ENST00000586577 NCKAP5LQ9HCH0 1330 aa20.52■□□□□ 0.87
CNN1-205ENST00000586577 GPATCH8Q9UKJ3 1502 aaKnown RBP20.51■□□□□ 0.87
CNN1-205ENST00000586577 MTUS2Q5JR59 1369 aa20.5■□□□□ 0.87
CNN1-205ENST00000586577 ZMYM3Q14202 1370 aa20.49■□□□□ 0.87
CNN1-205ENST00000586577 ABCC1P33527 1531 aa20.49■□□□□ 0.87
CNN1-205ENST00000586577 PLA2R1Q13018 1463 aa20.49■□□□□ 0.87
CNN1-205ENST00000586577 ITSN2Q9NZM3 1697 aa20.48■□□□□ 0.87
CNN1-205ENST00000586577 SAMD9LQ8IVG5 1584 aa20.48■□□□□ 0.87
CNN1-205ENST00000586577 SUPT6HQ7KZ85 1726 aaKnown RBP20.47■□□□□ 0.87
CNN1-205ENST00000586577 KIDINS220Q9ULH0 1771 aa20.46■□□□□ 0.87
CNN1-205ENST00000586577 SCAF1Q9H7N4 1312 aaKnown RBP20.45■□□□□ 0.86
CNN1-205ENST00000586577 PPP6R1Q9UPN7 881 aa20.44■□□□□ 0.86
CNN1-205ENST00000586577 ZNF142P52746 1687 aaPredicted RBP20.44■□□□□ 0.86
CNN1-205ENST00000586577 TOM1O60784 492 aa20.43■□□□□ 0.86
CNN1-205ENST00000586577 MED1Q15648 1581 aaPredicted RBP20.42■□□□□ 0.86
CNN1-205ENST00000586577 TCOF1Q13428 1488 aaKnown RBP20.42■□□□□ 0.86
CNN1-205ENST00000586577 CCNB3Q8WWL7 1395 aa20.41■□□□□ 0.86
CNN1-205ENST00000586577 NCOA2Q15596 1464 aa20.41■□□□□ 0.86
CNN1-205ENST00000586577 LRRC9Q6ZRR7 1453 aa20.41■□□□□ 0.86
CNN1-205ENST00000586577 SYCP2Q9BX26 1530 aa20.41■□□□□ 0.86
CNN1-205ENST00000586577 MYO3AQ8NEV4 1616 aa20.41■□□□□ 0.86
CNN1-205ENST00000586577 HSPA1LP34931 641 aa20.4■□□□□ 0.86
CNN1-205ENST00000586577 CEP170BQ9Y4F5 1589 aaPredicted RBP20.4■□□□□ 0.86
CNN1-205ENST00000586577 MAP3K1Q13233 1512 aa20.39■□□□□ 0.85
CNN1-205ENST00000586577 PIP4K2BP78356 416 aa20.39■□□□□ 0.85
CNN1-205ENST00000586577 KANK4Q5T7N3 995 aaPredicted RBP20.39■□□□□ 0.85
CNN1-205ENST00000586577 PHF23Q9BUL5 403 aaPredicted RBP20.39■□□□□ 0.85
CNN1-205ENST00000586577 SPAG9O60271 1321 aaKnown RBP20.38■□□□□ 0.85
CNN1-205ENST00000586577 ZNF777Q9ULD5 760 aaPredicted RBP20.38■□□□□ 0.85
CNN1-205ENST00000586577 CLTCQ00610 1675 aaKnown RBP20.37■□□□□ 0.85
CNN1-205ENST00000586577 ZNF644Q9H582 1327 aaPredicted RBP20.35■□□□□ 0.85
CNN1-205ENST00000586577 CFDP1Q9UEE9 299 aaPredicted RBP20.35■□□□□ 0.85
CNN1-205ENST00000586577 PTPRKQ15262 1439 aa20.35■□□□□ 0.85
CNN1-205ENST00000586577 CPS1P31327 1500 aa20.34■□□□□ 0.85
CNN1-205ENST00000586577 HNRNPMP52272 730 aaKnown RBP eCLIP20.33■□□□□ 0.85
CNN1-205ENST00000586577 GGT6Q6P531 493 aa20.32■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 52.4 ms