RNA–Protein interactions for RNA: ENST00000586373.1

LINC01028-201, Transcript of long intergenic non-protein coding RNA 1028, humanhuman

TSL 1 (best) BASIC

Gene LINC01028, Length 1,045 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01028-201ENST00000586373 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.92□□□□□ -0.18
LINC01028-201ENST00000586373 GOLGA2Q08379 1002 aa13.91□□□□□ -0.18
LINC01028-201ENST00000586373 KDM4FA0A1W2PPD8 638 aa13.9□□□□□ -0.18
LINC01028-201ENST00000586373 PDAP1Q13442 181 aaKnown RBP13.89□□□□□ -0.19
LINC01028-201ENST00000586373 DPY19L2Q6NUT2 758 aa13.89□□□□□ -0.19
LINC01028-201ENST00000586373 ILDR2Q71H61 639 aa13.88□□□□□ -0.19
LINC01028-201ENST00000586373 CABP2Q9NPB3 220 aa13.85□□□□□ -0.19
LINC01028-201ENST00000586373 ZCCHC6Q5VYS8 1495 aaKnown RBP13.85□□□□□ -0.19
LINC01028-201ENST00000586373 ERCC6L2Q5T890 1561 aa13.83□□□□□ -0.19
LINC01028-201ENST00000586373 L3MBTL3Q96JM7 780 aaPredicted RBP13.83□□□□□ -0.2
LINC01028-201ENST00000586373 MARVELD3Q96A59 401 aa13.81□□□□□ -0.2
LINC01028-201ENST00000586373 BAZ1BQ9UIG0 1483 aaKnown RBP13.8□□□□□ -0.2
LINC01028-201ENST00000586373 C3orf67Q6ZVT6 689 aa13.79□□□□□ -0.2
LINC01028-201ENST00000586373 SNPHO15079 494 aa13.77□□□□□ -0.21
LINC01028-201ENST00000586373 RSF1Q96T23 1441 aaPredicted RBP13.76□□□□□ -0.21
LINC01028-201ENST00000586373 HECW2Q9P2P5 1572 aa13.75□□□□□ -0.21
LINC01028-201ENST00000586373 CEP164Q9UPV0 1460 aa13.74□□□□□ -0.21
LINC01028-201ENST00000586373 TMEM121BQ9BXQ6 578 aaPredicted RBP13.74□□□□□ -0.21
LINC01028-201ENST00000586373 CADPSQ9ULU8 1353 aa13.71□□□□□ -0.21
LINC01028-201ENST00000586373 CHD1O14646 1710 aa13.7□□□□□ -0.22
LINC01028-201ENST00000586373 EFCAB3Q8N7B9 438 aa13.7□□□□□ -0.22
LINC01028-201ENST00000586373 DISP3Q9P2K9 1392 aa13.7□□□□□ -0.22
LINC01028-201ENST00000586373 SMARCA4P51532 1647 aa13.69□□□□□ -0.22
LINC01028-201ENST00000586373 BOLA1Q9Y3E2 137 aa13.69□□□□□ -0.22
LINC01028-201ENST00000586373 POTEB3A0JP26 581 aa13.68□□□□□ -0.22
LINC01028-201ENST00000586373 POTEBQ6S5H4 581 aa13.68□□□□□ -0.22
LINC01028-201ENST00000586373 RNF25Q96BH1 459 aaPredicted RBP13.67□□□□□ -0.22
LINC01028-201ENST00000586373 ZNF608Q9ULD9 1512 aaPredicted RBP13.67□□□□□ -0.22
LINC01028-201ENST00000586373 HOXB3P14651 431 aaPredicted RBP13.61□□□□□ -0.23
LINC01028-201ENST00000586373 EMP3P54852 163 aa13.61□□□□□ -0.23
LINC01028-201ENST00000586373 SPNS2Q8IVW8 549 aa13.61□□□□□ -0.23
LINC01028-201ENST00000586373 FANCD2Q9BXW9 1451 aa13.61□□□□□ -0.23
LINC01028-201ENST00000586373 URB2Q14146 1524 aaKnown RBP13.59□□□□□ -0.23
LINC01028-201ENST00000586373 FAM205CA6NFA0 338 aa13.58□□□□□ -0.24
LINC01028-201ENST00000586373 G3V3G9 751 aa13.58□□□□□ -0.24
LINC01028-201ENST00000586373 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.57□□□□□ -0.24
LINC01028-201ENST00000586373 ZFP91Q96JP5 570 aaPredicted RBP13.57□□□□□ -0.24
LINC01028-201ENST00000586373 RIOK3O14730 519 aaKnown RBP13.56□□□□□ -0.24
LINC01028-201ENST00000586373 MMRN1Q13201 1228 aa13.56□□□□□ -0.24
LINC01028-201ENST00000586373 HS3ST6Q96QI5 342 aa13.56□□□□□ -0.24
LINC01028-201ENST00000586373 SYNJ2O15056 1496 aa13.55□□□□□ -0.24
LINC01028-201ENST00000586373 TMEM92Q6UXU6 159 aa13.54□□□□□ -0.24
LINC01028-201ENST00000586373 MS4A4AQ96JQ5 239 aa13.54□□□□□ -0.24
LINC01028-201ENST00000586373 KRTAP3-3Q9BYR6 98 aa13.53□□□□□ -0.24
LINC01028-201ENST00000586373 KRTAP3-2Q9BYR7 98 aa13.53□□□□□ -0.24
LINC01028-201ENST00000586373 KIF13AQ9H1H9 1805 aa13.53□□□□□ -0.24
LINC01028-201ENST00000586373 EIF4G3O43432 1585 aaKnown RBP13.52□□□□□ -0.25
LINC01028-201ENST00000586373 PHF8Q9UPP1 1060 aa13.51□□□□□ -0.25
LINC01028-201ENST00000586373 MICALL2Q8IY33 904 aa13.5□□□□□ -0.25
LINC01028-201ENST00000586373 IFT140Q96RY7 1462 aa13.48□□□□□ -0.25
LINC01028-201ENST00000586373 VGFO15240 615 aaPredicted RBP13.48□□□□□ -0.25
LINC01028-201ENST00000586373 SOX12O15370 315 aa13.48□□□□□ -0.25
LINC01028-201ENST00000586373 ADGRL1O94910 1474 aa13.48□□□□□ -0.25
LINC01028-201ENST00000586373 HOXB1P14653 301 aaPredicted RBP13.46□□□□□ -0.25
LINC01028-201ENST00000586373 GAPVD1Q14C86 1478 aa13.46□□□□□ -0.25
LINC01028-201ENST00000586373 CLASP1Q7Z460 1538 aa13.45□□□□□ -0.26
LINC01028-201ENST00000586373 KDM6BO15054 1643 aa13.44□□□□□ -0.26
LINC01028-201ENST00000586373 PEG3Q9GZU2 1588 aa13.44□□□□□ -0.26
LINC01028-201ENST00000586373 ZNF710Q8N1W2 664 aa13.43□□□□□ -0.26
LINC01028-201ENST00000586373 SPATA31D1Q6ZQQ2 1576 aa13.41□□□□□ -0.26
LINC01028-201ENST00000586373 DOK7Q18PE1 504 aa13.4□□□□□ -0.26
LINC01028-201ENST00000586373 BCL11BQ9C0K0 894 aaPredicted RBP13.38□□□□□ -0.27
LINC01028-201ENST00000586373 FBXO22Q8NEZ5 403 aa13.37□□□□□ -0.27
LINC01028-201ENST00000586373 AQRO60306 1485 aaKnown RBP eCLIP13.36□□□□□ -0.27
LINC01028-201ENST00000586373 ERBB3P21860 1342 aa13.36□□□□□ -0.27
LINC01028-201ENST00000586373 STK24Q9Y6E0 443 aa13.34□□□□□ -0.27
LINC01028-201ENST00000586373 SYNJ1O43426 1573 aa13.32□□□□□ -0.28
LINC01028-201ENST00000586373 GPR153Q6NV75 609 aa13.32□□□□□ -0.28
LINC01028-201ENST00000586373 NLRP6P59044 892 aa13.31□□□□□ -0.28
LINC01028-201ENST00000586373 MFRPQ9BY79 579 aa13.31□□□□□ -0.28
LINC01028-201ENST00000586373 FAM69CQ0P6D2 419 aa13.3□□□□□ -0.28
LINC01028-201ENST00000586373 VARS2Q5ST30 1063 aaKnown RBP13.3□□□□□ -0.28
LINC01028-201ENST00000586373 RIMBP2O15034 1052 aa13.28□□□□□ -0.28
LINC01028-201ENST00000586373 ECM2O94769 699 aaPredicted RBP13.28□□□□□ -0.28
LINC01028-201ENST00000586373 PKD2Q13563 968 aa13.28□□□□□ -0.28
LINC01028-201ENST00000586373 STK25O00506 426 aa13.26□□□□□ -0.29
LINC01028-201ENST00000586373 RGL2O15211 777 aa13.26□□□□□ -0.29
LINC01028-201ENST00000586373 ARSIQ5FYB1 569 aa13.26□□□□□ -0.29
LINC01028-201ENST00000586373 KHSRPQ92945 711 aaKnown RBP eCLIP13.26□□□□□ -0.29
LINC01028-201ENST00000586373 CFTRP13569 1480 aa13.25□□□□□ -0.29
LINC01028-201ENST00000586373 ZSWIM6Q9HCJ5 1215 aa13.24□□□□□ -0.29
LINC01028-201ENST00000586373 TSPOAP1O95153 1857 aa13.22□□□□□ -0.29
LINC01028-201ENST00000586373 CHMP7Q8WUX9 453 aaPredicted RBP13.21□□□□□ -0.29
LINC01028-201ENST00000586373 MROH2BQ7Z745 1585 aa13.2□□□□□ -0.3
LINC01028-201ENST00000586373 TAOK2Q9UL54 1235 aa13.2□□□□□ -0.3
LINC01028-201ENST00000586373 ABCC10Q5T3U5 1492 aa13.2□□□□□ -0.3
LINC01028-201ENST00000586373 SNAPC4Q5SXM2 1469 aa13.19□□□□□ -0.3
LINC01028-201ENST00000586373 ZNF687Q8N1G0 1237 aa13.19□□□□□ -0.3
LINC01028-201ENST00000586373 TOPBP1Q92547 1522 aa13.18□□□□□ -0.3
LINC01028-201ENST00000586373 C2orf72A6NCS6 295 aa13.18□□□□□ -0.3
LINC01028-201ENST00000586373 KIF3CO14782 793 aa13.18□□□□□ -0.3
LINC01028-201ENST00000586373 TARBP1Q13395 1621 aaKnown RBP13.16□□□□□ -0.3
LINC01028-201ENST00000586373 DIP2BQ9P265 1576 aa13.15□□□□□ -0.3
LINC01028-201ENST00000586373 PPP1R37O75864 691 aa13.14□□□□□ -0.31
LINC01028-201ENST00000586373 CERKQ8TCT0 537 aa13.13□□□□□ -0.31
LINC01028-201ENST00000586373 ZNF316A6NFI3 1004 aaPredicted RBP13.11□□□□□ -0.31
LINC01028-201ENST00000586373 NUDT7P0C024 238 aa13.07□□□□□ -0.32
LINC01028-201ENST00000586373 RNF166Q96A37 237 aaPredicted RBP13.07□□□□□ -0.32
LINC01028-201ENST00000586373 TDRD9Q8NDG6 1382 aaKnown RBP13.07□□□□□ -0.32
LINC01028-201ENST00000586373 TOP2BQ02880 1626 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 125.7 ms