RNA–Protein interactions for RNA: ENST00000584767.5

KCTD2-209, Transcript of potassium channel tetramerization domain containing 2, humanhuman

TSL 1 (best)

Gene KCTD2, Length 815 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCTD2-209ENST00000584767 ARID3CA6NKF2 412 aa21.9■■□□□ 1.1
KCTD2-209ENST00000584767 HECW1Q76N89 1606 aa21.88■■□□□ 1.09
KCTD2-209ENST00000584767 NCOA1Q15788 1441 aa21.88■■□□□ 1.09
KCTD2-209ENST00000584767 CFAP74Q9C0B2 1584 aa21.84■■□□□ 1.09
KCTD2-209ENST00000584767 HSPA1LP34931 641 aa21.83■■□□□ 1.09
KCTD2-209ENST00000584767 ATP10AO60312 1499 aa21.83■■□□□ 1.08
KCTD2-209ENST00000584767 C9orf84Q5VXU9 1444 aa21.79■■□□□ 1.08
KCTD2-209ENST00000584767 ZNF335Q9H4Z2 1342 aaPredicted RBP21.79■■□□□ 1.08
KCTD2-209ENST00000584767 C3P01024 1663 aa21.79■■□□□ 1.08
KCTD2-209ENST00000584767 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.73■■□□□ 1.07
KCTD2-209ENST00000584767 TRAPPC8Q9Y2L5 1435 aa21.72■■□□□ 1.07
KCTD2-209ENST00000584767 RAPGEF6Q8TEU7 1601 aa21.72■■□□□ 1.07
KCTD2-209ENST00000584767 CAMSAP1Q5T5Y3 1602 aa21.7■■□□□ 1.06
KCTD2-209ENST00000584767 PHF23Q9BUL5 403 aaPredicted RBP21.68■■□□□ 1.06
KCTD2-209ENST00000584767 SCAPERQ9BY12 1400 aa21.68■■□□□ 1.06
KCTD2-209ENST00000584767 NUP153P49790 1475 aaKnown RBP21.68■■□□□ 1.06
KCTD2-209ENST00000584767 NCKAP5LQ9HCH0 1330 aa21.63■■□□□ 1.05
KCTD2-209ENST00000584767 FAM9AQ8IZU1 332 aaPredicted RBP21.63■■□□□ 1.05
KCTD2-209ENST00000584767 RGS17Q9UGC6 210 aaPredicted RBP21.63■■□□□ 1.05
KCTD2-209ENST00000584767 P3H3Q8IVL6 736 aa21.62■■□□□ 1.05
KCTD2-209ENST00000584767 REREQ9P2R6 1566 aa21.61■■□□□ 1.05
KCTD2-209ENST00000584767 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.61■■□□□ 1.05
KCTD2-209ENST00000584767 HNRNPUL2Q1KMD3 747 aaKnown RBP21.61■■□□□ 1.05
KCTD2-209ENST00000584767 PIP4K2BP78356 416 aa21.59■■□□□ 1.05
KCTD2-209ENST00000584767 SAMD9Q5K651 1589 aa21.59■■□□□ 1.05
KCTD2-209ENST00000584767 PLEKHD1A6NEE1 506 aa21.58■■□□□ 1.05
KCTD2-209ENST00000584767 ALKQ9UM73 1620 aa21.58■■□□□ 1.04
KCTD2-209ENST00000584767 TCOF1Q13428 1488 aaKnown RBP21.58■■□□□ 1.04
KCTD2-209ENST00000584767 PLCH2O75038 1416 aa21.57■■□□□ 1.04
KCTD2-209ENST00000584767 AGLP35573 1532 aa21.57■■□□□ 1.04
KCTD2-209ENST00000584767 PLA2R1Q13018 1463 aa21.57■■□□□ 1.04
KCTD2-209ENST00000584767 TOM1O60784 492 aa21.56■■□□□ 1.04
KCTD2-209ENST00000584767 PKD2Q13563 968 aa21.55■■□□□ 1.04
KCTD2-209ENST00000584767 KDM5CP41229 1560 aa21.55■■□□□ 1.04
KCTD2-209ENST00000584767 DIP2CQ9Y2E4 1556 aa21.55■■□□□ 1.04
KCTD2-209ENST00000584767 NPATQ14207 1427 aa21.55■■□□□ 1.04
KCTD2-209ENST00000584767 SCAF1Q9H7N4 1312 aaKnown RBP21.55■■□□□ 1.04
KCTD2-209ENST00000584767 PRXQ9BXM0 1461 aa21.53■■□□□ 1.04
KCTD2-209ENST00000584767 ZNF142P52746 1687 aaPredicted RBP21.5■■□□□ 1.03
KCTD2-209ENST00000584767 CNTLNQ9NXG0 1405 aa21.49■■□□□ 1.03
KCTD2-209ENST00000584767 ZNF518AQ6AHZ1 1483 aa21.49■■□□□ 1.03
KCTD2-209ENST00000584767 CPS1P31327 1500 aa21.48■■□□□ 1.03
KCTD2-209ENST00000584767 ABCA6Q8N139 1617 aa21.47■■□□□ 1.03
KCTD2-209ENST00000584767 MROH2AA6NES4 1674 aa21.47■■□□□ 1.03
KCTD2-209ENST00000584767 AFAP1Q8N556 730 aa21.45■■□□□ 1.02
KCTD2-209ENST00000584767 PPP6R1Q9UPN7 881 aa21.45■■□□□ 1.02
KCTD2-209ENST00000584767 SUPT6HQ7KZ85 1726 aaKnown RBP21.41■■□□□ 1.02
KCTD2-209ENST00000584767 MYO3AQ8NEV4 1616 aa21.41■■□□□ 1.02
KCTD2-209ENST00000584767 MLH3Q9UHC1 1453 aa21.41■■□□□ 1.02
KCTD2-209ENST00000584767 PTPRKQ15262 1439 aa21.41■■□□□ 1.02
KCTD2-209ENST00000584767 EFCAB2Q5VUJ9 269 aa21.41■■□□□ 1.02
KCTD2-209ENST00000584767 ESF1Q9H501 851 aaKnown RBP21.41■■□□□ 1.02
KCTD2-209ENST00000584767 CEP170BQ9Y4F5 1589 aaPredicted RBP21.4■■□□□ 1.02
KCTD2-209ENST00000584767 SHANK2Q9UPX8 1470 aa21.4■■□□□ 1.02
KCTD2-209ENST00000584767 MYO5CQ9NQX4 1742 aa21.38■■□□□ 1.01
KCTD2-209ENST00000584767 ZMYM3Q14202 1370 aa21.38■■□□□ 1.01
KCTD2-209ENST00000584767 POTEAQ6S8J7 498 aa21.38■■□□□ 1.01
KCTD2-209ENST00000584767 SRCAPQ6ZRS2 3230 aa21.37■■□□□ 1.01
KCTD2-209ENST00000584767 NEURL4Q96JN8 1562 aa21.33■■□□□ 1.01
KCTD2-209ENST00000584767 VWDEQ8N2E2 1590 aa21.31■■□□□ 1
KCTD2-209ENST00000584767 SETD1AO15047 1707 aaKnown RBP21.29■■□□□ 1
KCTD2-209ENST00000584767 CDK13Q14004 1512 aaKnown RBP21.29■■□□□ 1
KCTD2-209ENST00000584767 KIDINS220Q9ULH0 1771 aa21.28■■□□□ 1
KCTD2-209ENST00000584767 POLR1AO95602 1720 aaPredicted RBP21.28■■□□□ 1
KCTD2-209ENST00000584767 DNMT1P26358 1616 aaKnown RBP21.28■■□□□ 1
KCTD2-209ENST00000584767 A2ML1A8K2U0 1454 aa21.24■□□□□ 0.99
KCTD2-209ENST00000584767 MYT1LQ9UL68 1186 aa21.23■□□□□ 0.99
KCTD2-209ENST00000584767 CLTCQ00610 1675 aaKnown RBP21.23■□□□□ 0.99
KCTD2-209ENST00000584767 KIF14Q15058 1648 aa21.22■□□□□ 0.99
KCTD2-209ENST00000584767 ARHGAP5Q13017 1502 aa21.21■□□□□ 0.99
KCTD2-209ENST00000584767 SENP3Q9H4L4 574 aaPredicted RBP21.2■□□□□ 0.98
KCTD2-209ENST00000584767 CDC42BPBQ9Y5S2 1711 aa21.19■□□□□ 0.98
KCTD2-209ENST00000584767 STRCP1A6NGW2 1772 aa21.19■□□□□ 0.98
KCTD2-209ENST00000584767 RNF17Q9BXT8 1623 aaKnown RBP21.18■□□□□ 0.98
KCTD2-209ENST00000584767 UPF1Q92900 1129 aaKnown RBP eCLIP21.18■□□□□ 0.98
KCTD2-209ENST00000584767 LRRC7Q96NW7 1537 aa21.18■□□□□ 0.98
KCTD2-209ENST00000584767 ITSN2Q9NZM3 1697 aa21.16■□□□□ 0.98
KCTD2-209ENST00000584767 ABCC1P33527 1531 aa21.16■□□□□ 0.98
KCTD2-209ENST00000584767 MED14O60244 1454 aa21.14■□□□□ 0.98
KCTD2-209ENST00000584767 SYNMO15061 1565 aa21.1■□□□□ 0.97
KCTD2-209ENST00000584767 PLXNC1O60486 1568 aa21.1■□□□□ 0.97
KCTD2-209ENST00000584767 DEPDC5O75140 1603 aa21.09■□□□□ 0.97
KCTD2-209ENST00000584767 SAMD9LQ8IVG5 1584 aa21.06■□□□□ 0.96
KCTD2-209ENST00000584767 NPHP4O75161 1426 aaPredicted RBP21.05■□□□□ 0.96
KCTD2-209ENST00000584767 TROQ12816 1431 aaPredicted RBP21.05■□□□□ 0.96
KCTD2-209ENST00000584767 ANKLE2Q86XL3 938 aa21.05■□□□□ 0.96
KCTD2-209ENST00000584767 PREX2Q70Z35 1606 aa21.04■□□□□ 0.96
KCTD2-209ENST00000584767 FAM135BQ49AJ0 1406 aa21.04■□□□□ 0.96
KCTD2-209ENST00000584767 XIRP1Q702N8 1843 aaKnown RBP21.02■□□□□ 0.96
KCTD2-209ENST00000584767 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.02■□□□□ 0.96
KCTD2-209ENST00000584767 RANGAP1P46060 587 aaPredicted RBP21.02■□□□□ 0.96
KCTD2-209ENST00000584767 IQGAP1P46940 1657 aa21.02■□□□□ 0.95
KCTD2-209ENST00000584767 CDK11AQ9UQ88 783 aaPredicted RBP21■□□□□ 0.95
KCTD2-209ENST00000584767 TNRQ92752 1358 aa20.97■□□□□ 0.95
KCTD2-209ENST00000584767 A2MP01023 1474 aa20.96■□□□□ 0.95
KCTD2-209ENST00000584767 GGT6Q6P531 493 aa20.95■□□□□ 0.94
KCTD2-209ENST00000584767 FBXO31Q5XUX0 539 aaPredicted RBP20.94■□□□□ 0.94
KCTD2-209ENST00000584767 THEMISQ8N1K5 641 aaPredicted RBP20.94■□□□□ 0.94
KCTD2-209ENST00000584767 ZC3H13Q5T200 1668 aaKnown RBP20.93■□□□□ 0.94
KCTD2-209ENST00000584767 CSRNP3Q8WYN3 585 aa20.93■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms