RNA–Protein interactions for RNA: ENST00000584620.5

PGAP3-209, Transcript of post-GPI attachment to proteins 3, humanhuman

TSL 3

Gene PGAP3, Length 804 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PGAP3-209ENST00000584620 EHMT2Q96KQ7 1210 aa17.99■□□□□ 0.47
PGAP3-209ENST00000584620 DMRT2Q9Y5R5 561 aa17.99■□□□□ 0.47
PGAP3-209ENST00000584620 ZFYVE16Q7Z3T8 1539 aa17.98■□□□□ 0.47
PGAP3-209ENST00000584620 TTC37Q6PGP7 1564 aa17.97■□□□□ 0.47
PGAP3-209ENST00000584620 PREX1Q8TCU6 1659 aa17.96■□□□□ 0.47
PGAP3-209ENST00000584620 UBTFP17480 764 aaKnown RBP17.96■□□□□ 0.47
PGAP3-209ENST00000584620 CDK13Q14004 1512 aaKnown RBP17.94■□□□□ 0.46
PGAP3-209ENST00000584620 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.94■□□□□ 0.46
PGAP3-209ENST00000584620 ZMYM4Q5VZL5 1548 aa17.93■□□□□ 0.46
PGAP3-209ENST00000584620 ARHGAP35Q9NRY4 1499 aa17.93■□□□□ 0.46
PGAP3-209ENST00000584620 HECW1Q76N89 1606 aa17.91■□□□□ 0.46
PGAP3-209ENST00000584620 ARHGEF12Q9NZN5 1544 aa17.9■□□□□ 0.46
PGAP3-209ENST00000584620 FMN1Q68DA7 1419 aa17.89■□□□□ 0.45
PGAP3-209ENST00000584620 MAGI2Q86UL8 1455 aa17.88■□□□□ 0.45
PGAP3-209ENST00000584620 CFAP74Q9C0B2 1584 aa17.88■□□□□ 0.45
PGAP3-209ENST00000584620 UHRF1BP1Q6BDS2 1440 aa17.88■□□□□ 0.45
PGAP3-209ENST00000584620 ATP1B4Q9UN42 357 aaPredicted RBP17.86■□□□□ 0.45
PGAP3-209ENST00000584620 PLCH2O75038 1416 aa17.86■□□□□ 0.45
PGAP3-209ENST00000584620 SCAPERQ9BY12 1400 aa17.86■□□□□ 0.45
PGAP3-209ENST00000584620 ATP10AO60312 1499 aa17.86■□□□□ 0.45
PGAP3-209ENST00000584620 LTBP4Q8N2S1 1624 aa17.86■□□□□ 0.45
PGAP3-209ENST00000584620 PTPRTO14522 1441 aa17.85■□□□□ 0.45
PGAP3-209ENST00000584620 SETD1BQ9UPS6 1966 aaKnown RBP17.84■□□□□ 0.45
PGAP3-209ENST00000584620 C9orf84Q5VXU9 1444 aa17.82■□□□□ 0.44
PGAP3-209ENST00000584620 CDK11AQ9UQ88 783 aaPredicted RBP17.79■□□□□ 0.44
PGAP3-209ENST00000584620 UBAP1LF5GYI3 381 aa17.78■□□□□ 0.44
PGAP3-209ENST00000584620 TROQ12816 1431 aaPredicted RBP17.78■□□□□ 0.44
PGAP3-209ENST00000584620 IQSEC2Q5JU85 1478 aa17.77■□□□□ 0.44
PGAP3-209ENST00000584620 EFCAB2Q5VUJ9 269 aa17.77■□□□□ 0.44
PGAP3-209ENST00000584620 KIF14Q15058 1648 aa17.76■□□□□ 0.43
PGAP3-209ENST00000584620 MYT1LQ9UL68 1186 aa17.75■□□□□ 0.43
PGAP3-209ENST00000584620 C3P01024 1663 aa17.74■□□□□ 0.43
PGAP3-209ENST00000584620 AFAP1Q8N556 730 aa17.72■□□□□ 0.43
PGAP3-209ENST00000584620 NCOA1Q15788 1441 aa17.72■□□□□ 0.43
PGAP3-209ENST00000584620 CASKIN1Q8WXD9 1431 aa17.72■□□□□ 0.43
PGAP3-209ENST00000584620 ZNF335Q9H4Z2 1342 aaPredicted RBP17.72■□□□□ 0.43
PGAP3-209ENST00000584620 CLIP1P30622 1438 aa17.71■□□□□ 0.43
PGAP3-209ENST00000584620 ESF1Q9H501 851 aaKnown RBP17.7■□□□□ 0.42
PGAP3-209ENST00000584620 LRRIQ1Q96JM4 1722 aa17.69■□□□□ 0.42
PGAP3-209ENST00000584620 TRAPPC8Q9Y2L5 1435 aa17.69■□□□□ 0.42
PGAP3-209ENST00000584620 NCKAP5LQ9HCH0 1330 aa17.69■□□□□ 0.42
PGAP3-209ENST00000584620 MYO5CQ9NQX4 1742 aa17.68■□□□□ 0.42
PGAP3-209ENST00000584620 ARHGAP5Q13017 1502 aa17.67■□□□□ 0.42
PGAP3-209ENST00000584620 ZNF518AQ6AHZ1 1483 aa17.67■□□□□ 0.42
PGAP3-209ENST00000584620 CCDC18Q5T9S5 1454 aa17.66■□□□□ 0.42
PGAP3-209ENST00000584620 CAMSAP1Q5T5Y3 1602 aa17.65■□□□□ 0.42
PGAP3-209ENST00000584620 HSPA1LP34931 641 aa17.65■□□□□ 0.42
PGAP3-209ENST00000584620 SCAF1Q9H7N4 1312 aaKnown RBP17.65■□□□□ 0.42
PGAP3-209ENST00000584620 DIP2CQ9Y2E4 1556 aa17.65■□□□□ 0.42
PGAP3-209ENST00000584620 KDM5CP41229 1560 aa17.64■□□□□ 0.41
PGAP3-209ENST00000584620 MED1Q15648 1581 aaPredicted RBP17.63■□□□□ 0.41
PGAP3-209ENST00000584620 PIP4K2BP78356 416 aa17.62■□□□□ 0.41
PGAP3-209ENST00000584620 FYCO1Q9BQS8 1478 aa17.62■□□□□ 0.41
PGAP3-209ENST00000584620 MLH3Q9UHC1 1453 aa17.6■□□□□ 0.41
PGAP3-209ENST00000584620 ABCA6Q8N139 1617 aa17.6■□□□□ 0.41
PGAP3-209ENST00000584620 CDC42BPBQ9Y5S2 1711 aa17.6■□□□□ 0.41
PGAP3-209ENST00000584620 PREX2Q70Z35 1606 aa17.58■□□□□ 0.41
PGAP3-209ENST00000584620 ABCC1P33527 1531 aa17.58■□□□□ 0.41
PGAP3-209ENST00000584620 REREQ9P2R6 1566 aa17.57■□□□□ 0.4
PGAP3-209ENST00000584620 PHF23Q9BUL5 403 aaPredicted RBP17.56■□□□□ 0.4
PGAP3-209ENST00000584620 AGLP35573 1532 aa17.56■□□□□ 0.4
PGAP3-209ENST00000584620 CNTLNQ9NXG0 1405 aa17.55■□□□□ 0.4
PGAP3-209ENST00000584620 GPATCH8Q9UKJ3 1502 aaKnown RBP17.54■□□□□ 0.4
PGAP3-209ENST00000584620 ZMYM3Q14202 1370 aa17.53■□□□□ 0.4
PGAP3-209ENST00000584620 PKD2Q13563 968 aa17.53■□□□□ 0.4
PGAP3-209ENST00000584620 NPATQ14207 1427 aa17.53■□□□□ 0.4
PGAP3-209ENST00000584620 ZNF777Q9ULD5 760 aaPredicted RBP17.52■□□□□ 0.4
PGAP3-209ENST00000584620 PPP6R1Q9UPN7 881 aa17.51■□□□□ 0.39
PGAP3-209ENST00000584620 CDC42BPAQ5VT25 1732 aa17.5■□□□□ 0.39
PGAP3-209ENST00000584620 TOM1O60784 492 aa17.5■□□□□ 0.39
PGAP3-209ENST00000584620 HNRNPMP52272 730 aaKnown RBP eCLIP17.5■□□□□ 0.39
PGAP3-209ENST00000584620 ITSN2Q9NZM3 1697 aa17.5■□□□□ 0.39
PGAP3-209ENST00000584620 SENP3Q9H4L4 574 aaPredicted RBP17.49■□□□□ 0.39
PGAP3-209ENST00000584620 SUPT6HQ7KZ85 1726 aaKnown RBP17.49■□□□□ 0.39
PGAP3-209ENST00000584620 SAMD9LQ8IVG5 1584 aa17.49■□□□□ 0.39
PGAP3-209ENST00000584620 PLA2R1Q13018 1463 aa17.48■□□□□ 0.39
PGAP3-209ENST00000584620 KIDINS220Q9ULH0 1771 aa17.48■□□□□ 0.39
PGAP3-209ENST00000584620 SYCP2Q9BX26 1530 aa17.47■□□□□ 0.39
PGAP3-209ENST00000584620 CFDP1Q9UEE9 299 aaPredicted RBP17.47■□□□□ 0.39
PGAP3-209ENST00000584620 TCOF1Q13428 1488 aaKnown RBP17.47■□□□□ 0.39
PGAP3-209ENST00000584620 KIAA1107Q9UPP5 1409 aa17.47■□□□□ 0.39
PGAP3-209ENST00000584620 MROH2AA6NES4 1674 aa17.46■□□□□ 0.39
PGAP3-209ENST00000584620 SPAG9O60271 1321 aaKnown RBP17.46■□□□□ 0.38
PGAP3-209ENST00000584620 MTUS2Q5JR59 1369 aa17.45■□□□□ 0.38
PGAP3-209ENST00000584620 CCNB3Q8WWL7 1395 aa17.45■□□□□ 0.38
PGAP3-209ENST00000584620 MYO3AQ8NEV4 1616 aa17.45■□□□□ 0.38
PGAP3-209ENST00000584620 CEP170BQ9Y4F5 1589 aaPredicted RBP17.45■□□□□ 0.38
PGAP3-209ENST00000584620 ZNF142P52746 1687 aaPredicted RBP17.43■□□□□ 0.38
PGAP3-209ENST00000584620 CLTCQ00610 1675 aaKnown RBP17.43■□□□□ 0.38
PGAP3-209ENST00000584620 CEP162Q5TB80 1403 aa17.43■□□□□ 0.38
PGAP3-209ENST00000584620 ZNF644Q9H582 1327 aaPredicted RBP17.43■□□□□ 0.38
PGAP3-209ENST00000584620 PTPRKQ15262 1439 aa17.42■□□□□ 0.38
PGAP3-209ENST00000584620 PLEKHH2Q8IVE3 1493 aa17.42■□□□□ 0.38
PGAP3-209ENST00000584620 GGT6Q6P531 493 aa17.39■□□□□ 0.37
PGAP3-209ENST00000584620 ATP7AQ04656 1500 aa17.38■□□□□ 0.37
PGAP3-209ENST00000584620 TIAM1Q13009 1591 aa17.38■□□□□ 0.37
PGAP3-209ENST00000584620 MBD5Q9P267 1494 aa17.37■□□□□ 0.37
PGAP3-209ENST00000584620 SHANK2Q9UPX8 1470 aa17.37■□□□□ 0.37
PGAP3-209ENST00000584620 CPS1P31327 1500 aa17.37■□□□□ 0.37
PGAP3-209ENST00000584620 RGS17Q9UGC6 210 aaPredicted RBP17.37■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 11.1 ms