RNA–Protein interactions for RNA: ENST00000584558.5

ITGB4-212, Transcript of integrin subunit beta 4, humanhuman

TSL 1 (best)

Gene ITGB4, Length 2,895 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-212ENST00000584558 HFM1A2PYH4 1435 aa17.97■□□□□ 0.47
ITGB4-212ENST00000584558 TROQ12816 1431 aaPredicted RBP17.96■□□□□ 0.47
ITGB4-212ENST00000584558 CLASP1Q7Z460 1538 aa17.93■□□□□ 0.46
ITGB4-212ENST00000584558 NAIPQ13075 1403 aa17.93■□□□□ 0.46
ITGB4-212ENST00000584558 KIF14Q15058 1648 aa17.93■□□□□ 0.46
ITGB4-212ENST00000584558 GCC2Q8IWJ2 1684 aa17.92■□□□□ 0.46
ITGB4-212ENST00000584558 ATP10BO94823 1461 aa17.92■□□□□ 0.46
ITGB4-212ENST00000584558 CDK11AQ9UQ88 783 aaPredicted RBP17.92■□□□□ 0.46
ITGB4-212ENST00000584558 AKNAQ7Z591 1439 aa17.9■□□□□ 0.46
ITGB4-212ENST00000584558 ITSN2Q9NZM3 1697 aa17.89■□□□□ 0.46
ITGB4-212ENST00000584558 PTPRGP23470 1445 aa17.89■□□□□ 0.45
ITGB4-212ENST00000584558 DNMT1P26358 1616 aaKnown RBP17.88■□□□□ 0.45
ITGB4-212ENST00000584558 GPATCH8Q9UKJ3 1502 aaKnown RBP17.86■□□□□ 0.45
ITGB4-212ENST00000584558 ABCC10Q5T3U5 1492 aa17.85■□□□□ 0.45
ITGB4-212ENST00000584558 DEKP35659 375 aaKnown RBP17.84■□□□□ 0.45
ITGB4-212ENST00000584558 UACAQ9BZF9 1416 aa17.84■□□□□ 0.45
ITGB4-212ENST00000584558 DAPK1P53355 1430 aa17.84■□□□□ 0.45
ITGB4-212ENST00000584558 CDC42BPAQ5VT25 1732 aa17.83■□□□□ 0.44
ITGB4-212ENST00000584558 FANCIQ9NVI1 1328 aa17.83■□□□□ 0.44
ITGB4-212ENST00000584558 ABCC5O15440 1437 aa17.82■□□□□ 0.44
ITGB4-212ENST00000584558 CYB5RLQ6IPT4 315 aa17.82■□□□□ 0.44
ITGB4-212ENST00000584558 KDM6BO15054 1643 aa17.82■□□□□ 0.44
ITGB4-212ENST00000584558 TRIM52Q96A61 297 aa17.81■□□□□ 0.44
ITGB4-212ENST00000584558 CAMSAP2Q08AD1 1489 aa17.81■□□□□ 0.44
ITGB4-212ENST00000584558 ANO8Q9HCE9 1232 aaPredicted RBP17.81■□□□□ 0.44
ITGB4-212ENST00000584558 ROCK1Q13464 1354 aa17.8■□□□□ 0.44
ITGB4-212ENST00000584558 ZNF644Q9H582 1327 aaPredicted RBP17.8■□□□□ 0.44
ITGB4-212ENST00000584558 CROCC2H7BZ55 1655 aa17.79■□□□□ 0.44
ITGB4-212ENST00000584558 ABCC2Q92887 1545 aa17.79■□□□□ 0.44
ITGB4-212ENST00000584558 PLEKHD1A6NEE1 506 aa17.77■□□□□ 0.44
ITGB4-212ENST00000584558 MYT1LQ9UL68 1186 aa17.77■□□□□ 0.43
ITGB4-212ENST00000584558 DDX10Q13206 875 aaKnown RBP17.76■□□□□ 0.43
ITGB4-212ENST00000584558 CHIC2Q9UKJ5 165 aa17.76■□□□□ 0.43
ITGB4-212ENST00000584558 RRP7BPQ9NSQ0 103 aa17.75■□□□□ 0.43
ITGB4-212ENST00000584558 ADGBQ8N7X0 1667 aa17.75■□□□□ 0.43
ITGB4-212ENST00000584558 DENND4BO75064 1496 aaPredicted RBP17.75■□□□□ 0.43
ITGB4-212ENST00000584558 CFDP1Q9UEE9 299 aaPredicted RBP17.73■□□□□ 0.43
ITGB4-212ENST00000584558 SIN3AQ96ST3 1273 aa17.73■□□□□ 0.43
ITGB4-212ENST00000584558 UHRF1BP1LA0JNW5 1464 aa17.72■□□□□ 0.43
ITGB4-212ENST00000584558 ADGRL2O95490 1459 aa17.72■□□□□ 0.43
ITGB4-212ENST00000584558 PREX2Q70Z35 1606 aa17.71■□□□□ 0.43
ITGB4-212ENST00000584558 TIMELESSQ9UNS1 1208 aa17.7■□□□□ 0.42
ITGB4-212ENST00000584558 CDC42BPBQ9Y5S2 1711 aa17.7■□□□□ 0.42
ITGB4-212ENST00000584558 ZCCHC11Q5TAX3 1644 aaKnown RBP17.68■□□□□ 0.42
ITGB4-212ENST00000584558 IRX6P78412 446 aaPredicted RBP17.68■□□□□ 0.42
ITGB4-212ENST00000584558 TTC37Q6PGP7 1564 aa17.67■□□□□ 0.42
ITGB4-212ENST00000584558 SHANK2Q9UPX8 1470 aa17.67■□□□□ 0.42
ITGB4-212ENST00000584558 KDM5BQ9UGL1 1544 aa17.67■□□□□ 0.42
ITGB4-212ENST00000584558 NCOA1Q15788 1441 aa17.67■□□□□ 0.42
ITGB4-212ENST00000584558 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.66■□□□□ 0.42
ITGB4-212ENST00000584558 ARHGEF5Q12774 1597 aa17.66■□□□□ 0.42
ITGB4-212ENST00000584558 SAMD9LQ8IVG5 1584 aa17.66■□□□□ 0.42
ITGB4-212ENST00000584558 NBR1Q14596 966 aa17.65■□□□□ 0.42
ITGB4-212ENST00000584558 MBD5Q9P267 1494 aa17.63■□□□□ 0.41
ITGB4-212ENST00000584558 SALL2Q9Y467 1007 aaPredicted RBP17.63■□□□□ 0.41
ITGB4-212ENST00000584558 ZNF777Q9ULD5 760 aaPredicted RBP17.62■□□□□ 0.41
ITGB4-212ENST00000584558 RIMBP3CA6NJZ7 1639 aa17.62■□□□□ 0.41
ITGB4-212ENST00000584558 RIMBP3BA6NNM3 1639 aa17.62■□□□□ 0.41
ITGB4-212ENST00000584558 RIMBP3Q9UFD9 1639 aa17.62■□□□□ 0.41
ITGB4-212ENST00000584558 MYO5CQ9NQX4 1742 aa17.6■□□□□ 0.41
ITGB4-212ENST00000584558 PPP1R15AO75807 674 aaPredicted RBP17.59■□□□□ 0.41
ITGB4-212ENST00000584558 MPHOSPH9Q99550 1183 aa17.59■□□□□ 0.41
ITGB4-212ENST00000584558 DNAJC5Q9H3Z4 198 aa17.58■□□□□ 0.41
ITGB4-212ENST00000584558 C9orf84Q5VXU9 1444 aa17.58■□□□□ 0.41
ITGB4-212ENST00000584558 ANKRD30AQ9BXX3 1397 aa17.58■□□□□ 0.4
ITGB4-212ENST00000584558 ANP32CO43423 234 aa17.58■□□□□ 0.4
ITGB4-212ENST00000584558 PZPP20742 1482 aa17.57■□□□□ 0.4
ITGB4-212ENST00000584558 CCDC136Q96JN2 1154 aa17.57■□□□□ 0.4
ITGB4-212ENST00000584558 HIRIP3Q9BW71 556 aaPredicted RBP17.56■□□□□ 0.4
ITGB4-212ENST00000584558 CCDC141Q6ZP82 1450 aa17.55■□□□□ 0.4
ITGB4-212ENST00000584558 CCER2I3L3R5 266 aa17.55■□□□□ 0.4
ITGB4-212ENST00000584558 MAST1Q9Y2H9 1570 aa17.54■□□□□ 0.4
ITGB4-212ENST00000584558 ARHGAP5Q13017 1502 aa17.54■□□□□ 0.4
ITGB4-212ENST00000584558 TONSLQ96HA7 1378 aa17.54■□□□□ 0.4
ITGB4-212ENST00000584558 SYCP2Q9BX26 1530 aa17.53■□□□□ 0.4
ITGB4-212ENST00000584558 ANKRD50Q9ULJ7 1429 aa17.52■□□□□ 0.4
ITGB4-212ENST00000584558 ANKRD30BQ9BXX2 1392 aa17.52■□□□□ 0.4
ITGB4-212ENST00000584558 HNRNPMP52272 730 aaKnown RBP eCLIP17.52■□□□□ 0.4
ITGB4-212ENST00000584558 NOP58Q9Y2X3 529 aaKnown RBP17.52■□□□□ 0.39
ITGB4-212ENST00000584558 PLCH2O75038 1416 aa17.51■□□□□ 0.39
ITGB4-212ENST00000584558 KDM5DQ9BY66 1539 aa17.51■□□□□ 0.39
ITGB4-212ENST00000584558 KIAA1107Q9UPP5 1409 aa17.51■□□□□ 0.39
ITGB4-212ENST00000584558 ERICH6BQ5W0A0 696 aa17.5■□□□□ 0.39
ITGB4-212ENST00000584558 PLEKHH2Q8IVE3 1493 aa17.49■□□□□ 0.39
ITGB4-212ENST00000584558 RSPH4AQ5TD94 716 aa17.49■□□□□ 0.39
ITGB4-212ENST00000584558 ARHGEF12Q9NZN5 1544 aa17.48■□□□□ 0.39
ITGB4-212ENST00000584558 HNRNPUQ00839 825 aaKnown RBP eCLIP17.48■□□□□ 0.39
ITGB4-212ENST00000584558 ARAP3Q8WWN8 1544 aa17.48■□□□□ 0.39
ITGB4-212ENST00000584558 RPRD2Q5VT52 1461 aaKnown RBP17.48■□□□□ 0.39
ITGB4-212ENST00000584558 PAK3O75914 559 aaPredicted RBP17.47■□□□□ 0.39
ITGB4-212ENST00000584558 RTN4Q9NQC3 1192 aaKnown RBP17.47■□□□□ 0.39
ITGB4-212ENST00000584558 TSPY4P0CV99 314 aa17.47■□□□□ 0.39
ITGB4-212ENST00000584558 TSPY10P0CW01 314 aa17.47■□□□□ 0.39
ITGB4-212ENST00000584558 PLXNC1O60486 1568 aa17.47■□□□□ 0.39
ITGB4-212ENST00000584558 WDR7Q9Y4E6 1490 aa17.47■□□□□ 0.39
ITGB4-212ENST00000584558 FOXD1Q16676 465 aa17.46■□□□□ 0.39
ITGB4-212ENST00000584558 KIF15Q9NS87 1388 aa17.46■□□□□ 0.39
ITGB4-212ENST00000584558 ABCC1P33527 1531 aa17.46■□□□□ 0.39
ITGB4-212ENST00000584558 IL27Q8NEV9 243 aa17.45■□□□□ 0.38
ITGB4-212ENST00000584558 SLC4A1APQ9BWU0 796 aaKnown RBP17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms