RNA–Protein interactions for RNA: ENST00000584337.5

CDH8-211, Transcript of cadherin 8, humanhuman

TSL 5 BASIC

Gene CDH8, Length 3,986 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH8-211ENST00000584337 ESPNB1AK53 854 aa13.26□□□□□ -0.29
CDH8-211ENST00000584337 FAM13BQ9NYF5 915 aa13.26□□□□□ -0.29
CDH8-211ENST00000584337 CDK11BP21127 795 aaKnown RBP13.26□□□□□ -0.29
CDH8-211ENST00000584337 CANXP27824 592 aaKnown RBP13.26□□□□□ -0.29
CDH8-211ENST00000584337 MROH2BQ7Z745 1585 aa13.25□□□□□ -0.29
CDH8-211ENST00000584337 MRE11P49959 708 aa13.24□□□□□ -0.29
CDH8-211ENST00000584337 CNTLNQ9NXG0 1405 aa13.24□□□□□ -0.29
CDH8-211ENST00000584337 SLC4A1APQ9BWU0 796 aaKnown RBP13.23□□□□□ -0.29
CDH8-211ENST00000584337 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.22□□□□□ -0.29
CDH8-211ENST00000584337 KIF21BO75037 1637 aa13.22□□□□□ -0.29
CDH8-211ENST00000584337 BBXQ8WY36 941 aaPredicted RBP13.22□□□□□ -0.29
CDH8-211ENST00000584337 KIAA1211Q6ZU35 1233 aa13.21□□□□□ -0.29
CDH8-211ENST00000584337 BCL11BQ9C0K0 894 aaPredicted RBP13.21□□□□□ -0.3
CDH8-211ENST00000584337 CUX2O14529 1486 aa13.19□□□□□ -0.3
CDH8-211ENST00000584337 MAPKBP1O60336 1514 aa13.19□□□□□ -0.3
CDH8-211ENST00000584337 FHAD1B1AJZ9 1412 aa13.19□□□□□ -0.3
CDH8-211ENST00000584337 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.19□□□□□ -0.3
CDH8-211ENST00000584337 MTERF4Q7Z6M4 381 aaKnown RBP13.19□□□□□ -0.3
CDH8-211ENST00000584337 RAPGEF2Q9Y4G8 1499 aa13.18□□□□□ -0.3
CDH8-211ENST00000584337 XRCC6P12956 609 aaKnown RBP eCLIP13.18□□□□□ -0.3
CDH8-211ENST00000584337 ZNF777Q9ULD5 760 aaPredicted RBP13.18□□□□□ -0.3
CDH8-211ENST00000584337 BICRAQ9NZM4 1560 aa13.18□□□□□ -0.3
CDH8-211ENST00000584337 CENPQQ7L2Z9 268 aaPredicted RBP13.18□□□□□ -0.3
CDH8-211ENST00000584337 RNF123Q5XPI4 1314 aa13.16□□□□□ -0.3
CDH8-211ENST00000584337 CRBNQ96SW2 442 aa13.16□□□□□ -0.3
CDH8-211ENST00000584337 SPRYD3Q8NCJ5 442 aa13.16□□□□□ -0.3
CDH8-211ENST00000584337 ZHX1Q9UKY1 873 aaPredicted RBP13.16□□□□□ -0.3
CDH8-211ENST00000584337 WIZO95785 1651 aa13.16□□□□□ -0.3
CDH8-211ENST00000584337 PDE3BQ13370 1112 aa13.15□□□□□ -0.3
CDH8-211ENST00000584337 AMER1Q5JTC6 1135 aaPredicted RBP13.15□□□□□ -0.3
CDH8-211ENST00000584337 KTN1Q86UP2 1357 aaKnown RBP13.15□□□□□ -0.3
CDH8-211ENST00000584337 PLIN1O60240 522 aa13.14□□□□□ -0.31
CDH8-211ENST00000584337 CENPJQ9HC77 1338 aaPredicted RBP13.14□□□□□ -0.31
CDH8-211ENST00000584337 CCDC7Q96M83 1385 aa13.14□□□□□ -0.31
CDH8-211ENST00000584337 PANK2Q9BZ23 570 aa13.13□□□□□ -0.31
CDH8-211ENST00000584337 SKAP1Q86WV1 359 aa13.13□□□□□ -0.31
CDH8-211ENST00000584337 GRPEL1Q9HAV7 217 aa13.12□□□□□ -0.31
CDH8-211ENST00000584337 R3HCC1Q9Y3T6 440 aaKnown RBP13.12□□□□□ -0.31
CDH8-211ENST00000584337 TRAK2O60296 914 aa13.12□□□□□ -0.31
CDH8-211ENST00000584337 SMARCA2P51531 1590 aa13.12□□□□□ -0.31
CDH8-211ENST00000584337 CHIC2Q9UKJ5 165 aa13.11□□□□□ -0.31
CDH8-211ENST00000584337 ISY1Q9ULR0 285 aaKnown RBP13.11□□□□□ -0.31
CDH8-211ENST00000584337 DDX11L8A8MPP1 907 aa13.1□□□□□ -0.31
CDH8-211ENST00000584337 DNTTIP2Q5QJE6 756 aaKnown RBP13.1□□□□□ -0.31
CDH8-211ENST00000584337 GOLGA6L22H0YM25 854 aa13.1□□□□□ -0.31
CDH8-211ENST00000584337 TAF7LQ5H9L4 462 aa13.1□□□□□ -0.31
CDH8-211ENST00000584337 SMAP1Q8IYB5 467 aaPredicted RBP13.1□□□□□ -0.31
CDH8-211ENST00000584337 NAP1L2Q9ULW6 460 aaPredicted RBP13.1□□□□□ -0.31
CDH8-211ENST00000584337 PRDM10Q9NQV6 1147 aa13.09□□□□□ -0.31
CDH8-211ENST00000584337 MCM4P33991 863 aa13.08□□□□□ -0.32
CDH8-211ENST00000584337 CHMP5Q9NZZ3 219 aa13.06□□□□□ -0.32
CDH8-211ENST00000584337 BAZ1AQ9NRL2 1556 aaPredicted RBP13.06□□□□□ -0.32
CDH8-211ENST00000584337 GBP4Q96PP9 640 aa13.05□□□□□ -0.32
CDH8-211ENST00000584337 KIF7Q2M1P5 1343 aa13.04□□□□□ -0.32
CDH8-211ENST00000584337 PNISRQ8TF01 805 aaKnown RBP13.04□□□□□ -0.32
CDH8-211ENST00000584337 NCAPD3P42695 1498 aa13.04□□□□□ -0.32
CDH8-211ENST00000584337 PTMSP20962 102 aa13.04□□□□□ -0.32
CDH8-211ENST00000584337 ZSCAN30Q86W11 494 aa13.04□□□□□ -0.32
CDH8-211ENST00000584337 HSCBQ8IWL3 235 aa13.04□□□□□ -0.32
CDH8-211ENST00000584337 CHMP4BQ9H444 224 aaKnown RBP13.04□□□□□ -0.32
CDH8-211ENST00000584337 UQCRHLA0A096LP55 91 aa13.03□□□□□ -0.32
CDH8-211ENST00000584337 PTMAP06454 111 aaKnown RBP13.03□□□□□ -0.32
CDH8-211ENST00000584337 UQCRHP07919 91 aa13.03□□□□□ -0.32
CDH8-211ENST00000584337 L3MBTL2Q969R5 705 aa13.03□□□□□ -0.32
CDH8-211ENST00000584337 CCDC173Q0VFZ6 552 aa13.03□□□□□ -0.32
CDH8-211ENST00000584337 CSPP1Q1MSJ5 1256 aa13.03□□□□□ -0.32
CDH8-211ENST00000584337 PRDM4Q9UKN5 801 aa13.02□□□□□ -0.33
CDH8-211ENST00000584337 SKOR2Q2VWA4 1001 aaPredicted RBP13.01□□□□□ -0.33
CDH8-211ENST00000584337 RRP7BPQ9NSQ0 103 aa13□□□□□ -0.33
CDH8-211ENST00000584337 ARAP1Q96P48 1450 aa13□□□□□ -0.33
CDH8-211ENST00000584337 RALBP1Q15311 655 aa13□□□□□ -0.33
CDH8-211ENST00000584337 C8orf34Q49A92 452 aa13□□□□□ -0.33
CDH8-211ENST00000584337 OFD1O75665 1012 aa12.99□□□□□ -0.33
CDH8-211ENST00000584337 NASPP49321 788 aaPredicted RBP12.99□□□□□ -0.33
CDH8-211ENST00000584337 MAPK8IP3Q9UPT6 1336 aa12.98□□□□□ -0.33
CDH8-211ENST00000584337 FSD2A1L4K1 749 aa12.98□□□□□ -0.33
CDH8-211ENST00000584337 HSP90AB1P08238 724 aaKnown RBP12.97□□□□□ -0.33
CDH8-211ENST00000584337 TERF1P54274 439 aa12.97□□□□□ -0.33
CDH8-211ENST00000584337 CDCA7LQ96GN5 454 aa12.97□□□□□ -0.33
CDH8-211ENST00000584337 CCDC18Q5T9S5 1454 aa12.97□□□□□ -0.33
CDH8-211ENST00000584337 UACAQ9BZF9 1416 aa12.97□□□□□ -0.33
CDH8-211ENST00000584337 TAF3Q5VWG9 929 aa12.96□□□□□ -0.33
CDH8-211ENST00000584337 PHLDB1Q86UU1 1377 aa12.96□□□□□ -0.33
CDH8-211ENST00000584337 TOP2AP11388 1531 aaKnown RBP12.96□□□□□ -0.33
CDH8-211ENST00000584337 MYBBP1AQ9BQG0 1328 aaKnown RBP12.96□□□□□ -0.33
CDH8-211ENST00000584337 DYNC1I1O14576 645 aa12.96□□□□□ -0.33
CDH8-211ENST00000584337 ZNF771Q7L3S4 317 aaPredicted RBP12.96□□□□□ -0.33
CDH8-211ENST00000584337 PEG3Q9GZU2 1588 aa12.96□□□□□ -0.34
CDH8-211ENST00000584337 ARHGAP35Q9NRY4 1499 aa12.95□□□□□ -0.34
CDH8-211ENST00000584337 FMN1Q68DA7 1419 aa12.95□□□□□ -0.34
CDH8-211ENST00000584337 PPP4R3BQ5MIZ7 849 aa12.95□□□□□ -0.34
CDH8-211ENST00000584337 PAXIP1Q6ZW49 1069 aaPredicted RBP12.95□□□□□ -0.34
CDH8-211ENST00000584337 NLRP13Q86W25 1043 aa12.95□□□□□ -0.34
CDH8-211ENST00000584337 WDR43Q15061 677 aaKnown RBP eCLIP12.94□□□□□ -0.34
CDH8-211ENST00000584337 NCOA1Q15788 1441 aa12.94□□□□□ -0.34
CDH8-211ENST00000584337 ZBTB7CA1YPR0 619 aa12.94□□□□□ -0.34
CDH8-211ENST00000584337 IPO4Q8TEX9 1081 aaKnown RBP12.94□□□□□ -0.34
CDH8-211ENST00000584337 KIF15Q9NS87 1388 aa12.93□□□□□ -0.34
CDH8-211ENST00000584337 KIF20AO95235 890 aa12.93□□□□□ -0.34
CDH8-211ENST00000584337 GTPBP4Q9BZE4 634 aaKnown RBP12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms