RNA–Protein interactions for RNA: ENST00000583320.5

SNX11-212, Transcript of sorting nexin 11, humanhuman

TSL 3

Gene SNX11, Length 965 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-212ENST00000583320 CDK13Q14004 1512 aaKnown RBP29.34■■■□□ 2.29
SNX11-212ENST00000583320 ARHGEF12Q9NZN5 1544 aa29.32■■■□□ 2.28
SNX11-212ENST00000583320 SCAPERQ9BY12 1400 aa29.29■■■□□ 2.28
SNX11-212ENST00000583320 PREX1Q8TCU6 1659 aa29.28■■■□□ 2.28
SNX11-212ENST00000583320 PLCH2O75038 1416 aa29.25■■■□□ 2.27
SNX11-212ENST00000583320 ATP10AO60312 1499 aa29.23■■■□□ 2.27
SNX11-212ENST00000583320 ILDR2Q71H61 639 aa29.23■■■□□ 2.27
SNX11-212ENST00000583320 STRCQ7RTU9 1775 aa29.23■■■□□ 2.27
SNX11-212ENST00000583320 C9orf84Q5VXU9 1444 aa29.22■■■□□ 2.27
SNX11-212ENST00000583320 CEBPAP49715 358 aaPredicted RBP29.22■■■□□ 2.27
SNX11-212ENST00000583320 DISP3Q9P2K9 1392 aa29.17■■■□□ 2.26
SNX11-212ENST00000583320 MYO5CQ9NQX4 1742 aa29.16■■■□□ 2.26
SNX11-212ENST00000583320 EEA1Q15075 1411 aa29.14■■■□□ 2.26
SNX11-212ENST00000583320 KIF14Q15058 1648 aa29.13■■■□□ 2.25
SNX11-212ENST00000583320 KDM5CP41229 1560 aa29.09■■■□□ 2.25
SNX11-212ENST00000583320 UHRF1BP1Q6BDS2 1440 aa29.09■■■□□ 2.25
SNX11-212ENST00000583320 EFCAB2Q5VUJ9 269 aa29.07■■■□□ 2.24
SNX11-212ENST00000583320 DIP2CQ9Y2E4 1556 aa29.07■■■□□ 2.24
SNX11-212ENST00000583320 ZNF518AQ6AHZ1 1483 aa29.06■■■□□ 2.24
SNX11-212ENST00000583320 SOCS7O14512 581 aa29.06■■■□□ 2.24
SNX11-212ENST00000583320 AFAP1Q8N556 730 aa29.03■■■□□ 2.24
SNX11-212ENST00000583320 SPATA31D1Q6ZQQ2 1576 aa29.03■■■□□ 2.24
SNX11-212ENST00000583320 C3P01024 1663 aa29.02■■■□□ 2.24
SNX11-212ENST00000583320 ABCA6Q8N139 1617 aa29.02■■■□□ 2.24
SNX11-212ENST00000583320 DMRT2Q9Y5R5 561 aa29.02■■■□□ 2.24
SNX11-212ENST00000583320 ARHGAP5Q13017 1502 aa29.01■■■□□ 2.23
SNX11-212ENST00000583320 REREQ9P2R6 1566 aa29■■■□□ 2.23
SNX11-212ENST00000583320 SETD1BQ9UPS6 1966 aaKnown RBP28.99■■■□□ 2.23
SNX11-212ENST00000583320 ATP1B4Q9UN42 357 aaPredicted RBP28.98■■■□□ 2.23
SNX11-212ENST00000583320 LTBP4Q8N2S1 1624 aa28.98■■■□□ 2.23
SNX11-212ENST00000583320 PTPRTO14522 1441 aa28.97■■■□□ 2.23
SNX11-212ENST00000583320 TROQ12816 1431 aaPredicted RBP28.95■■■□□ 2.23
SNX11-212ENST00000583320 LRRIQ1Q96JM4 1722 aa28.95■■■□□ 2.23
SNX11-212ENST00000583320 ARHGAP35Q9NRY4 1499 aa28.95■■■□□ 2.22
SNX11-212ENST00000583320 FMN1Q68DA7 1419 aa28.94■■■□□ 2.22
SNX11-212ENST00000583320 CDC42BPBQ9Y5S2 1711 aa28.93■■■□□ 2.22
SNX11-212ENST00000583320 MLH3Q9UHC1 1453 aa28.91■■■□□ 2.22
SNX11-212ENST00000583320 AGLP35573 1532 aa28.89■■■□□ 2.22
SNX11-212ENST00000583320 EHMT2Q96KQ7 1210 aa28.89■■■□□ 2.22
SNX11-212ENST00000583320 MYT1LQ9UL68 1186 aa28.89■■■□□ 2.22
SNX11-212ENST00000583320 TRAPPC8Q9Y2L5 1435 aa28.88■■■□□ 2.21
SNX11-212ENST00000583320 NCOA1Q15788 1441 aa28.87■■■□□ 2.21
SNX11-212ENST00000583320 CDK11AQ9UQ88 783 aaPredicted RBP28.87■■■□□ 2.21
SNX11-212ENST00000583320 ABCC1P33527 1531 aa28.87■■■□□ 2.21
SNX11-212ENST00000583320 PREX2Q70Z35 1606 aa28.85■■■□□ 2.21
SNX11-212ENST00000583320 ITSN2Q9NZM3 1697 aa28.85■■■□□ 2.21
SNX11-212ENST00000583320 CLIP1P30622 1438 aa28.84■■■□□ 2.21
SNX11-212ENST00000583320 KIDINS220Q9ULH0 1771 aa28.83■■■□□ 2.21
SNX11-212ENST00000583320 IQSEC2Q5JU85 1478 aa28.82■■■□□ 2.2
SNX11-212ENST00000583320 UBTFP17480 764 aaKnown RBP28.78■■■□□ 2.2
SNX11-212ENST00000583320 CAMSAP1Q5T5Y3 1602 aa28.77■■■□□ 2.2
SNX11-212ENST00000583320 ESF1Q9H501 851 aaKnown RBP28.76■■■□□ 2.19
SNX11-212ENST00000583320 CNTLNQ9NXG0 1405 aa28.75■■■□□ 2.19
SNX11-212ENST00000583320 CDC42BPAQ5VT25 1732 aa28.72■■■□□ 2.19
SNX11-212ENST00000583320 MROH2AA6NES4 1674 aa28.72■■■□□ 2.19
SNX11-212ENST00000583320 SAMD9LQ8IVG5 1584 aa28.7■■■□□ 2.18
SNX11-212ENST00000583320 NPATQ14207 1427 aa28.69■■■□□ 2.18
SNX11-212ENST00000583320 ZNF335Q9H4Z2 1342 aaPredicted RBP28.69■■■□□ 2.18
SNX11-212ENST00000583320 LOC105371045A0A1W2PR82 267 aa28.67■■■□□ 2.18
SNX11-212ENST00000583320 NCKAP5LQ9HCH0 1330 aa28.67■■■□□ 2.18
SNX11-212ENST00000583320 MYO3AQ8NEV4 1616 aa28.65■■■□□ 2.18
SNX11-212ENST00000583320 SUPT6HQ7KZ85 1726 aaKnown RBP28.64■■■□□ 2.18
SNX11-212ENST00000583320 ZNF142P52746 1687 aaPredicted RBP28.64■■■□□ 2.17
SNX11-212ENST00000583320 ZMYM3Q14202 1370 aa28.63■■■□□ 2.17
SNX11-212ENST00000583320 SYCP2Q9BX26 1530 aa28.63■■■□□ 2.17
SNX11-212ENST00000583320 CLTCQ00610 1675 aaKnown RBP28.62■■■□□ 2.17
SNX11-212ENST00000583320 CCDC18Q5T9S5 1454 aa28.62■■■□□ 2.17
SNX11-212ENST00000583320 CASKIN1Q8WXD9 1431 aa28.61■■■□□ 2.17
SNX11-212ENST00000583320 UBAP1LF5GYI3 381 aa28.59■■■□□ 2.17
SNX11-212ENST00000583320 PLXNC1O60486 1568 aa28.58■■■□□ 2.17
SNX11-212ENST00000583320 TCOF1Q13428 1488 aaKnown RBP28.58■■■□□ 2.17
SNX11-212ENST00000583320 CEP170BQ9Y4F5 1589 aaPredicted RBP28.58■■■□□ 2.17
SNX11-212ENST00000583320 PLA2R1Q13018 1463 aa28.57■■■□□ 2.16
SNX11-212ENST00000583320 INO80Q9ULG1 1556 aaPredicted RBP28.55■■■□□ 2.16
SNX11-212ENST00000583320 ATP7AQ04656 1500 aa28.55■■■□□ 2.16
SNX11-212ENST00000583320 PTPRKQ15262 1439 aa28.55■■■□□ 2.16
SNX11-212ENST00000583320 ZNF777Q9ULD5 760 aaPredicted RBP28.55■■■□□ 2.16
SNX11-212ENST00000583320 SPAG9O60271 1321 aaKnown RBP28.54■■■□□ 2.16
SNX11-212ENST00000583320 GPATCH8Q9UKJ3 1502 aaKnown RBP28.53■■■□□ 2.16
SNX11-212ENST00000583320 HNRNPMP52272 730 aaKnown RBP eCLIP28.51■■■□□ 2.15
SNX11-212ENST00000583320 A2MP01023 1474 aa28.49■■■□□ 2.15
SNX11-212ENST00000583320 PKD2Q13563 968 aa28.49■■■□□ 2.15
SNX11-212ENST00000583320 FYCO1Q9BQS8 1478 aa28.46■■■□□ 2.15
SNX11-212ENST00000583320 KIAA1107Q9UPP5 1409 aa28.43■■■□□ 2.14
SNX11-212ENST00000583320 MED1Q15648 1581 aaPredicted RBP28.42■■■□□ 2.14
SNX11-212ENST00000583320 GGT6Q6P531 493 aa28.42■■■□□ 2.14
SNX11-212ENST00000583320 PPP6R1Q9UPN7 881 aa28.42■■■□□ 2.14
SNX11-212ENST00000583320 DNMT1P26358 1616 aaKnown RBP28.41■■■□□ 2.14
SNX11-212ENST00000583320 A2ML1A8K2U0 1454 aa28.39■■■□□ 2.13
SNX11-212ENST00000583320 NEURL4Q96JN8 1562 aa28.38■■■□□ 2.13
SNX11-212ENST00000583320 HSPA1LP34931 641 aa28.38■■■□□ 2.13
SNX11-212ENST00000583320 PLEKHH2Q8IVE3 1493 aa28.38■■■□□ 2.13
SNX11-212ENST00000583320 ADGBQ8N7X0 1667 aa28.37■■■□□ 2.13
SNX11-212ENST00000583320 POLR1AO95602 1720 aaPredicted RBP28.35■■■□□ 2.13
SNX11-212ENST00000583320 CFDP1Q9UEE9 299 aaPredicted RBP28.34■■■□□ 2.13
SNX11-212ENST00000583320 SCAF1Q9H7N4 1312 aaKnown RBP28.33■■■□□ 2.13
SNX11-212ENST00000583320 PIP4K2BP78356 416 aa28.32■■■□□ 2.12
SNX11-212ENST00000583320 CCNB3Q8WWL7 1395 aa28.31■■■□□ 2.12
SNX11-212ENST00000583320 CPS1P31327 1500 aa28.29■■■□□ 2.12
SNX11-212ENST00000583320 ZNF644Q9H582 1327 aaPredicted RBP28.29■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms