RNA–Protein interactions for RNA: ENST00000583254.1

CTC1-211, Transcript of CST telomere replication complex component 1, humanhuman

TSL 2

Gene CTC1, Length 469 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTC1-211ENST00000583254 PRXQ9BXM0 1461 aa12.23□□□□□ -0.45
CTC1-211ENST00000583254 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.22□□□□□ -0.45
CTC1-211ENST00000583254 MAGI2Q86UL8 1455 aa12.22□□□□□ -0.45
CTC1-211ENST00000583254 UHRF1BP1Q6BDS2 1440 aa12.22□□□□□ -0.45
CTC1-211ENST00000583254 CEBPAP49715 358 aaPredicted RBP12.22□□□□□ -0.45
CTC1-211ENST00000583254 DMRT2Q9Y5R5 561 aa12.22□□□□□ -0.45
CTC1-211ENST00000583254 LTBP4Q8N2S1 1624 aa12.22□□□□□ -0.45
CTC1-211ENST00000583254 PTPRTO14522 1441 aa12.2□□□□□ -0.46
CTC1-211ENST00000583254 C9orf84Q5VXU9 1444 aa12.2□□□□□ -0.46
CTC1-211ENST00000583254 ATP10AO60312 1499 aa12.18□□□□□ -0.46
CTC1-211ENST00000583254 IQSEC2Q5JU85 1478 aa12.18□□□□□ -0.46
CTC1-211ENST00000583254 SCAPERQ9BY12 1400 aa12.16□□□□□ -0.46
CTC1-211ENST00000583254 C3P01024 1663 aa12.16□□□□□ -0.46
CTC1-211ENST00000583254 SETD1BQ9UPS6 1966 aaKnown RBP12.16□□□□□ -0.46
CTC1-211ENST00000583254 PLEKHD1A6NEE1 506 aa12.15□□□□□ -0.46
CTC1-211ENST00000583254 NCOA1Q15788 1441 aa12.11□□□□□ -0.47
CTC1-211ENST00000583254 CDK13Q14004 1512 aaKnown RBP12.11□□□□□ -0.47
CTC1-211ENST00000583254 DIP2CQ9Y2E4 1556 aa12.1□□□□□ -0.47
CTC1-211ENST00000583254 PLCH2O75038 1416 aa12.1□□□□□ -0.47
CTC1-211ENST00000583254 MED1Q15648 1581 aaPredicted RBP12.09□□□□□ -0.47
CTC1-211ENST00000583254 MYO5CQ9NQX4 1742 aa12.09□□□□□ -0.47
CTC1-211ENST00000583254 RANGAP1P46060 587 aaPredicted RBP12.09□□□□□ -0.47
CTC1-211ENST00000583254 UBAP1LF5GYI3 381 aa12.08□□□□□ -0.48
CTC1-211ENST00000583254 KDM5CP41229 1560 aa12.08□□□□□ -0.48
CTC1-211ENST00000583254 ZNF518AQ6AHZ1 1483 aa12.08□□□□□ -0.48
CTC1-211ENST00000583254 CAMSAP1Q5T5Y3 1602 aa12.08□□□□□ -0.48
CTC1-211ENST00000583254 ABCA6Q8N139 1617 aa12.08□□□□□ -0.48
CTC1-211ENST00000583254 REREQ9P2R6 1566 aa12.06□□□□□ -0.48
CTC1-211ENST00000583254 TRAPPC8Q9Y2L5 1435 aa12.06□□□□□ -0.48
CTC1-211ENST00000583254 ZNF335Q9H4Z2 1342 aaPredicted RBP12.06□□□□□ -0.48
CTC1-211ENST00000583254 KIF14Q15058 1648 aa12.04□□□□□ -0.48
CTC1-211ENST00000583254 AFAP1Q8N556 730 aa12.03□□□□□ -0.48
CTC1-211ENST00000583254 MYT1LQ9UL68 1186 aa12.03□□□□□ -0.48
CTC1-211ENST00000583254 AGLP35573 1532 aa12.02□□□□□ -0.48
CTC1-211ENST00000583254 ARHGAP5Q13017 1502 aa12.02□□□□□ -0.48
CTC1-211ENST00000583254 EFCAB2Q5VUJ9 269 aa12.02□□□□□ -0.49
CTC1-211ENST00000583254 ESF1Q9H501 851 aaKnown RBP12.02□□□□□ -0.49
CTC1-211ENST00000583254 NCKAP5LQ9HCH0 1330 aa12.02□□□□□ -0.49
CTC1-211ENST00000583254 SUPT6HQ7KZ85 1726 aaKnown RBP12□□□□□ -0.49
CTC1-211ENST00000583254 ZNF142P52746 1687 aaPredicted RBP12□□□□□ -0.49
CTC1-211ENST00000583254 HSPA1LP34931 641 aa11.99□□□□□ -0.49
CTC1-211ENST00000583254 SCAF1Q9H7N4 1312 aaKnown RBP11.99□□□□□ -0.49
CTC1-211ENST00000583254 CNTLNQ9NXG0 1405 aa11.99□□□□□ -0.49
CTC1-211ENST00000583254 MYO3AQ8NEV4 1616 aa11.99□□□□□ -0.49
CTC1-211ENST00000583254 MROH2AA6NES4 1674 aa11.99□□□□□ -0.49
CTC1-211ENST00000583254 MLH3Q9UHC1 1453 aa11.98□□□□□ -0.49
CTC1-211ENST00000583254 NPATQ14207 1427 aa11.98□□□□□ -0.49
CTC1-211ENST00000583254 CSRNP3Q8WYN3 585 aa11.97□□□□□ -0.49
CTC1-211ENST00000583254 CDC42BPBQ9Y5S2 1711 aa11.97□□□□□ -0.49
CTC1-211ENST00000583254 ITSN2Q9NZM3 1697 aa11.97□□□□□ -0.49
CTC1-211ENST00000583254 PLA2R1Q13018 1463 aa11.96□□□□□ -0.49
CTC1-211ENST00000583254 PIP4K2BP78356 416 aa11.96□□□□□ -0.49
CTC1-211ENST00000583254 KIDINS220Q9ULH0 1771 aa11.96□□□□□ -0.49
CTC1-211ENST00000583254 CEP170BQ9Y4F5 1589 aaPredicted RBP11.96□□□□□ -0.5
CTC1-211ENST00000583254 ABCC1P33527 1531 aa11.96□□□□□ -0.5
CTC1-211ENST00000583254 TCOF1Q13428 1488 aaKnown RBP11.95□□□□□ -0.5
CTC1-211ENST00000583254 PHF23Q9BUL5 403 aaPredicted RBP11.95□□□□□ -0.5
CTC1-211ENST00000583254 CLTCQ00610 1675 aaKnown RBP11.94□□□□□ -0.5
CTC1-211ENST00000583254 PKD2Q13563 968 aa11.93□□□□□ -0.5
CTC1-211ENST00000583254 ATP1B4Q9UN42 357 aaPredicted RBP11.93□□□□□ -0.5
CTC1-211ENST00000583254 TROQ12816 1431 aaPredicted RBP11.93□□□□□ -0.5
CTC1-211ENST00000583254 PREX2Q70Z35 1606 aa11.93□□□□□ -0.5
CTC1-211ENST00000583254 ZMYM3Q14202 1370 aa11.92□□□□□ -0.5
CTC1-211ENST00000583254 PPP6R1Q9UPN7 881 aa11.92□□□□□ -0.5
CTC1-211ENST00000583254 LRRIQ1Q96JM4 1722 aa11.91□□□□□ -0.5
CTC1-211ENST00000583254 CLIP1P30622 1438 aa11.9□□□□□ -0.5
CTC1-211ENST00000583254 POLR1AO95602 1720 aaPredicted RBP11.89□□□□□ -0.51
CTC1-211ENST00000583254 PTPRKQ15262 1439 aa11.89□□□□□ -0.51
CTC1-211ENST00000583254 TOM1O60784 492 aa11.89□□□□□ -0.51
CTC1-211ENST00000583254 CDK11AQ9UQ88 783 aaPredicted RBP11.89□□□□□ -0.51
CTC1-211ENST00000583254 CPS1P31327 1500 aa11.89□□□□□ -0.51
CTC1-211ENST00000583254 FMN1Q68DA7 1419 aa11.88□□□□□ -0.51
CTC1-211ENST00000583254 ALKQ9UM73 1620 aa11.88□□□□□ -0.51
CTC1-211ENST00000583254 SAMD9LQ8IVG5 1584 aa11.88□□□□□ -0.51
CTC1-211ENST00000583254 NEURL4Q96JN8 1562 aa11.88□□□□□ -0.51
CTC1-211ENST00000583254 DNMT1P26358 1616 aaKnown RBP11.86□□□□□ -0.51
CTC1-211ENST00000583254 CDC42BPAQ5VT25 1732 aa11.86□□□□□ -0.51
CTC1-211ENST00000583254 SHANK2Q9UPX8 1470 aa11.86□□□□□ -0.51
CTC1-211ENST00000583254 PLXNC1O60486 1568 aa11.85□□□□□ -0.51
CTC1-211ENST00000583254 A2ML1A8K2U0 1454 aa11.85□□□□□ -0.51
CTC1-211ENST00000583254 SENP3Q9H4L4 574 aaPredicted RBP11.85□□□□□ -0.51
CTC1-211ENST00000583254 EEA1Q15075 1411 aa11.85□□□□□ -0.51
CTC1-211ENST00000583254 SYCP2Q9BX26 1530 aa11.84□□□□□ -0.51
CTC1-211ENST00000583254 VWDEQ8N2E2 1590 aa11.84□□□□□ -0.51
CTC1-211ENST00000583254 ARHGAP35Q9NRY4 1499 aa11.83□□□□□ -0.52
CTC1-211ENST00000583254 ATP7AQ04656 1500 aa11.83□□□□□ -0.52
CTC1-211ENST00000583254 INO80Q9ULG1 1556 aaPredicted RBP11.82□□□□□ -0.52
CTC1-211ENST00000583254 A2MP01023 1474 aa11.81□□□□□ -0.52
CTC1-211ENST00000583254 RGS17Q9UGC6 210 aaPredicted RBP11.8□□□□□ -0.52
CTC1-211ENST00000583254 SPAG9O60271 1321 aaKnown RBP11.8□□□□□ -0.52
CTC1-211ENST00000583254 RNF17Q9BXT8 1623 aaKnown RBP11.79□□□□□ -0.52
CTC1-211ENST00000583254 GGT6Q6P531 493 aa11.79□□□□□ -0.52
CTC1-211ENST00000583254 STRCP1A6NGW2 1772 aa11.78□□□□□ -0.52
CTC1-211ENST00000583254 EHMT2Q96KQ7 1210 aa11.78□□□□□ -0.52
CTC1-211ENST00000583254 ZNF777Q9ULD5 760 aaPredicted RBP11.78□□□□□ -0.52
CTC1-211ENST00000583254 SYNMO15061 1565 aa11.76□□□□□ -0.53
CTC1-211ENST00000583254 IQGAP1P46940 1657 aa11.76□□□□□ -0.53
CTC1-211ENST00000583254 ADGBQ8N7X0 1667 aa11.76□□□□□ -0.53
CTC1-211ENST00000583254 HNRNPMP52272 730 aaKnown RBP eCLIP11.76□□□□□ -0.53
CTC1-211ENST00000583254 SETD1AO15047 1707 aaKnown RBP11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms