RNA–Protein interactions for RNA: ENST00000582892.1

NF1-222, Transcript of neurofibromin 1, humanhuman

TSL 4

Gene NF1, Length 462 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NF1-222ENST00000582892 SOCS7O14512 581 aa12.77□□□□□ -0.37
NF1-222ENST00000582892 DISP3Q9P2K9 1392 aa12.77□□□□□ -0.37
NF1-222ENST00000582892 KIF27Q86VH2 1401 aa12.77□□□□□ -0.37
NF1-222ENST00000582892 CARMIL1Q5VZK9 1371 aa12.76□□□□□ -0.37
NF1-222ENST00000582892 BCORL1Q5H9F3 1711 aa12.76□□□□□ -0.37
NF1-222ENST00000582892 RIMS1Q86UR5 1692 aaKnown RBP12.74□□□□□ -0.37
NF1-222ENST00000582892 HSPA2P54652 639 aa12.74□□□□□ -0.37
NF1-222ENST00000582892 KCNH8Q96L42 1107 aa12.74□□□□□ -0.37
NF1-222ENST00000582892 UGGT2Q9NYU1 1516 aa12.72□□□□□ -0.37
NF1-222ENST00000582892 ZNF692Q9BU19 519 aaPredicted RBP12.71□□□□□ -0.37
NF1-222ENST00000582892 FRMPD1Q5SYB0 1578 aa12.7□□□□□ -0.38
NF1-222ENST00000582892 ARAP3Q8WWN8 1544 aa12.7□□□□□ -0.38
NF1-222ENST00000582892 CERKQ8TCT0 537 aa12.69□□□□□ -0.38
NF1-222ENST00000582892 AKT1S1Q96B36 256 aa12.69□□□□□ -0.38
NF1-222ENST00000582892 SPATA31D1Q6ZQQ2 1576 aa12.69□□□□□ -0.38
NF1-222ENST00000582892 ABCA8O94911 1581 aa12.68□□□□□ -0.38
NF1-222ENST00000582892 SIGLEC1Q9BZZ2 1709 aa12.68□□□□□ -0.38
NF1-222ENST00000582892 RAPGEF3O95398 923 aa12.67□□□□□ -0.38
NF1-222ENST00000582892 SPDYE4A6NLX3 237 aa12.66□□□□□ -0.38
NF1-222ENST00000582892 ARID3CA6NKF2 412 aa12.64□□□□□ -0.39
NF1-222ENST00000582892 ARID4BQ4LE39 1312 aaPredicted RBP12.62□□□□□ -0.39
NF1-222ENST00000582892 CTTNBP2Q8WZ74 1663 aa12.62□□□□□ -0.39
NF1-222ENST00000582892 ABCA9Q8IUA7 1624 aa12.62□□□□□ -0.39
NF1-222ENST00000582892 SSUH2Q9Y2M2 353 aa12.61□□□□□ -0.39
NF1-222ENST00000582892 ARHGEF40Q8TER5 1519 aa12.61□□□□□ -0.39
NF1-222ENST00000582892 RAPGEF2Q9Y4G8 1499 aa12.59□□□□□ -0.39
NF1-222ENST00000582892 STRCQ7RTU9 1775 aa12.58□□□□□ -0.4
NF1-222ENST00000582892 RICTORQ6R327 1708 aa12.57□□□□□ -0.4
NF1-222ENST00000582892 FER1L4A9Z1Z3 1794 aa12.57□□□□□ -0.4
NF1-222ENST00000582892 FKBP8Q14318 412 aa12.56□□□□□ -0.4
NF1-222ENST00000582892 ATP10BO94823 1461 aa12.54□□□□□ -0.4
NF1-222ENST00000582892 NEO1Q92859 1461 aa12.53□□□□□ -0.4
NF1-222ENST00000582892 PREX1Q8TCU6 1659 aa12.52□□□□□ -0.4
NF1-222ENST00000582892 TTC37Q6PGP7 1564 aa12.52□□□□□ -0.41
NF1-222ENST00000582892 YEATS2Q9ULM3 1422 aa12.51□□□□□ -0.41
NF1-222ENST00000582892 MLECQ14165 292 aa12.5□□□□□ -0.41
NF1-222ENST00000582892 GOLGA3Q08378 1498 aa12.5□□□□□ -0.41
NF1-222ENST00000582892 PHLDB1Q86UU1 1377 aa12.49□□□□□ -0.41
NF1-222ENST00000582892 REM2Q8IYK8 340 aaPredicted RBP12.49□□□□□ -0.41
NF1-222ENST00000582892 FANCAO15360 1455 aa12.47□□□□□ -0.41
NF1-222ENST00000582892 P3H3Q8IVL6 736 aa12.47□□□□□ -0.41
NF1-222ENST00000582892 ZFYVE16Q7Z3T8 1539 aa12.47□□□□□ -0.41
NF1-222ENST00000582892 SPDYE1Q8NFV5 336 aaPredicted RBP12.46□□□□□ -0.41
NF1-222ENST00000582892 DENND4BO75064 1496 aaPredicted RBP12.46□□□□□ -0.42
NF1-222ENST00000582892 CEBPAP49715 358 aaPredicted RBP12.45□□□□□ -0.42
NF1-222ENST00000582892 ZMYM4Q5VZL5 1548 aa12.45□□□□□ -0.42
NF1-222ENST00000582892 LTBP4Q8N2S1 1624 aa12.44□□□□□ -0.42
NF1-222ENST00000582892 FHOD3Q2V2M9 1422 aa12.44□□□□□ -0.42
NF1-222ENST00000582892 AKNAQ7Z591 1439 aa12.44□□□□□ -0.42
NF1-222ENST00000582892 HECW1Q76N89 1606 aa12.44□□□□□ -0.42
NF1-222ENST00000582892 RAPGEF6Q8TEU7 1601 aa12.44□□□□□ -0.42
NF1-222ENST00000582892 ARHGEF12Q9NZN5 1544 aa12.43□□□□□ -0.42
NF1-222ENST00000582892 POGZQ7Z3K3 1410 aa12.43□□□□□ -0.42
NF1-222ENST00000582892 STAG3Q9UJ98 1225 aa12.42□□□□□ -0.42
NF1-222ENST00000582892 EFCAB5A4FU69 1503 aa12.42□□□□□ -0.42
NF1-222ENST00000582892 NUP153P49790 1475 aaKnown RBP12.4□□□□□ -0.43
NF1-222ENST00000582892 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP12.39□□□□□ -0.43
NF1-222ENST00000582892 PROM2Q8N271 834 aa12.39□□□□□ -0.43
NF1-222ENST00000582892 CFAP74Q9C0B2 1584 aa12.39□□□□□ -0.43
NF1-222ENST00000582892 SAMD9Q5K651 1589 aa12.38□□□□□ -0.43
NF1-222ENST00000582892 C3P01024 1663 aa12.36□□□□□ -0.43
NF1-222ENST00000582892 UHRF1BP1Q6BDS2 1440 aa12.36□□□□□ -0.43
NF1-222ENST00000582892 CLEC11AQ9Y240 323 aa12.35□□□□□ -0.43
NF1-222ENST00000582892 SETD1BQ9UPS6 1966 aaKnown RBP12.35□□□□□ -0.43
NF1-222ENST00000582892 PTPRTO14522 1441 aa12.35□□□□□ -0.43
NF1-222ENST00000582892 PRXQ9BXM0 1461 aa12.34□□□□□ -0.43
NF1-222ENST00000582892 MAGI2Q86UL8 1455 aa12.33□□□□□ -0.44
NF1-222ENST00000582892 MED1Q15648 1581 aaPredicted RBP12.32□□□□□ -0.44
NF1-222ENST00000582892 PITPNM1O00562 1244 aa12.32□□□□□ -0.44
NF1-222ENST00000582892 ATP10AO60312 1499 aa12.32□□□□□ -0.44
NF1-222ENST00000582892 IQSEC2Q5JU85 1478 aa12.32□□□□□ -0.44
NF1-222ENST00000582892 C9orf84Q5VXU9 1444 aa12.31□□□□□ -0.44
NF1-222ENST00000582892 SCAPERQ9BY12 1400 aa12.31□□□□□ -0.44
NF1-222ENST00000582892 CHRDL2Q6WN34 429 aa12.31□□□□□ -0.44
NF1-222ENST00000582892 FBXO3Q9UK99 471 aa12.3□□□□□ -0.44
NF1-222ENST00000582892 NCOA1Q15788 1441 aa12.28□□□□□ -0.44
NF1-222ENST00000582892 UBAP1LF5GYI3 381 aa12.28□□□□□ -0.44
NF1-222ENST00000582892 ZNF335Q9H4Z2 1342 aaPredicted RBP12.28□□□□□ -0.44
NF1-222ENST00000582892 CDK13Q14004 1512 aaKnown RBP12.27□□□□□ -0.44
NF1-222ENST00000582892 DIP2CQ9Y2E4 1556 aa12.27□□□□□ -0.44
NF1-222ENST00000582892 RANGAP1P46060 587 aaPredicted RBP12.27□□□□□ -0.45
NF1-222ENST00000582892 CAMSAP1Q5T5Y3 1602 aa12.26□□□□□ -0.45
NF1-222ENST00000582892 PRR29P0C7W0 189 aa12.26□□□□□ -0.45
NF1-222ENST00000582892 ABCA6Q8N139 1617 aa12.26□□□□□ -0.45
NF1-222ENST00000582892 PLEKHD1A6NEE1 506 aa12.24□□□□□ -0.45
NF1-222ENST00000582892 MYO5CQ9NQX4 1742 aa12.24□□□□□ -0.45
NF1-222ENST00000582892 KIF14Q15058 1648 aa12.22□□□□□ -0.45
NF1-222ENST00000582892 KDM5CP41229 1560 aa12.22□□□□□ -0.45
NF1-222ENST00000582892 PLCH2O75038 1416 aa12.22□□□□□ -0.45
NF1-222ENST00000582892 NCKAP5LQ9HCH0 1330 aa12.22□□□□□ -0.45
NF1-222ENST00000582892 HSPA1LP34931 641 aa12.22□□□□□ -0.45
NF1-222ENST00000582892 SUPT6HQ7KZ85 1726 aaKnown RBP12.2□□□□□ -0.46
NF1-222ENST00000582892 FAM9AQ8IZU1 332 aaPredicted RBP12.2□□□□□ -0.46
NF1-222ENST00000582892 AFAP1Q8N556 730 aa12.2□□□□□ -0.46
NF1-222ENST00000582892 TRAPPC8Q9Y2L5 1435 aa12.2□□□□□ -0.46
NF1-222ENST00000582892 REREQ9P2R6 1566 aa12.18□□□□□ -0.46
NF1-222ENST00000582892 ZNF518AQ6AHZ1 1483 aa12.17□□□□□ -0.46
NF1-222ENST00000582892 PIP4K2BP78356 416 aa12.17□□□□□ -0.46
NF1-222ENST00000582892 ZNF142P52746 1687 aaPredicted RBP12.16□□□□□ -0.46
NF1-222ENST00000582892 MYO3AQ8NEV4 1616 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms