RNA–Protein interactions for RNA: ENST00000582481.1

SNX11-211, Transcript of sorting nexin 11, humanhuman

TSL 2

Gene SNX11, Length 627 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-211ENST00000582481 P3H3Q8IVL6 736 aa15.95■□□□□ 0.14
SNX11-211ENST00000582481 CFAP74Q9C0B2 1584 aa15.95■□□□□ 0.14
SNX11-211ENST00000582481 MAGI2Q86UL8 1455 aa15.92■□□□□ 0.14
SNX11-211ENST00000582481 MLECQ14165 292 aa15.9■□□□□ 0.14
SNX11-211ENST00000582481 CEBPAP49715 358 aaPredicted RBP15.88■□□□□ 0.13
SNX11-211ENST00000582481 PTPRTO14522 1441 aa15.86■□□□□ 0.13
SNX11-211ENST00000582481 SETD1BQ9UPS6 1966 aaKnown RBP15.85■□□□□ 0.13
SNX11-211ENST00000582481 ATP10AO60312 1499 aa15.84■□□□□ 0.13
SNX11-211ENST00000582481 FOXD1Q16676 465 aa15.84■□□□□ 0.13
SNX11-211ENST00000582481 C9orf84Q5VXU9 1444 aa15.84■□□□□ 0.13
SNX11-211ENST00000582481 IQSEC2Q5JU85 1478 aa15.84■□□□□ 0.13
SNX11-211ENST00000582481 UHRF1BP1Q6BDS2 1440 aa15.83■□□□□ 0.12
SNX11-211ENST00000582481 C3P01024 1663 aa15.83■□□□□ 0.12
SNX11-211ENST00000582481 SCAPERQ9BY12 1400 aa15.82■□□□□ 0.12
SNX11-211ENST00000582481 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.81■□□□□ 0.12
SNX11-211ENST00000582481 HNRNPUL2Q1KMD3 747 aaKnown RBP15.81■□□□□ 0.12
SNX11-211ENST00000582481 DMRT2Q9Y5R5 561 aa15.79■□□□□ 0.12
SNX11-211ENST00000582481 KDM5CP41229 1560 aa15.79■□□□□ 0.12
SNX11-211ENST00000582481 DIP2CQ9Y2E4 1556 aa15.79■□□□□ 0.12
SNX11-211ENST00000582481 CDK13Q14004 1512 aaKnown RBP15.78■□□□□ 0.12
SNX11-211ENST00000582481 PLCH2O75038 1416 aa15.77■□□□□ 0.12
SNX11-211ENST00000582481 NCOA1Q15788 1441 aa15.77■□□□□ 0.12
SNX11-211ENST00000582481 REREQ9P2R6 1566 aa15.76■□□□□ 0.11
SNX11-211ENST00000582481 ABCA6Q8N139 1617 aa15.76■□□□□ 0.11
SNX11-211ENST00000582481 PLEKHD1A6NEE1 506 aa15.75■□□□□ 0.11
SNX11-211ENST00000582481 MYO5CQ9NQX4 1742 aa15.74■□□□□ 0.11
SNX11-211ENST00000582481 KIF14Q15058 1648 aa15.72■□□□□ 0.11
SNX11-211ENST00000582481 FAM9AQ8IZU1 332 aaPredicted RBP15.7■□□□□ 0.1
SNX11-211ENST00000582481 ZNF518AQ6AHZ1 1483 aa15.7■□□□□ 0.1
SNX11-211ENST00000582481 MED1Q15648 1581 aaPredicted RBP15.7■□□□□ 0.1
SNX11-211ENST00000582481 CAMSAP1Q5T5Y3 1602 aa15.68■□□□□ 0.1
SNX11-211ENST00000582481 AGLP35573 1532 aa15.68■□□□□ 0.1
SNX11-211ENST00000582481 TRAPPC8Q9Y2L5 1435 aa15.68■□□□□ 0.1
SNX11-211ENST00000582481 ZNF335Q9H4Z2 1342 aaPredicted RBP15.67■□□□□ 0.1
SNX11-211ENST00000582481 AFAP1Q8N556 730 aa15.65■□□□□ 0.1
SNX11-211ENST00000582481 MLH3Q9UHC1 1453 aa15.64■□□□□ 0.09
SNX11-211ENST00000582481 ZNF142P52746 1687 aaPredicted RBP15.63■□□□□ 0.09
SNX11-211ENST00000582481 CDC42BPBQ9Y5S2 1711 aa15.63■□□□□ 0.09
SNX11-211ENST00000582481 KIDINS220Q9ULH0 1771 aa15.62■□□□□ 0.09
SNX11-211ENST00000582481 RANGAP1P46060 587 aaPredicted RBP15.62■□□□□ 0.09
SNX11-211ENST00000582481 MROH2AA6NES4 1674 aa15.62■□□□□ 0.09
SNX11-211ENST00000582481 LRRIQ1Q96JM4 1722 aa15.61■□□□□ 0.09
SNX11-211ENST00000582481 UBAP1LF5GYI3 381 aa15.61■□□□□ 0.09
SNX11-211ENST00000582481 EFCAB2Q5VUJ9 269 aa15.61■□□□□ 0.09
SNX11-211ENST00000582481 TCOF1Q13428 1488 aaKnown RBP15.6■□□□□ 0.09
SNX11-211ENST00000582481 ABCC1P33527 1531 aa15.6■□□□□ 0.09
SNX11-211ENST00000582481 ARHGAP5Q13017 1502 aa15.6■□□□□ 0.09
SNX11-211ENST00000582481 CSRNP3Q8WYN3 585 aa15.6■□□□□ 0.09
SNX11-211ENST00000582481 MYO3AQ8NEV4 1616 aa15.6■□□□□ 0.09
SNX11-211ENST00000582481 ITSN2Q9NZM3 1697 aa15.6■□□□□ 0.09
SNX11-211ENST00000582481 NCKAP5LQ9HCH0 1330 aa15.59■□□□□ 0.09
SNX11-211ENST00000582481 NPATQ14207 1427 aa15.59■□□□□ 0.09
SNX11-211ENST00000582481 ALKQ9UM73 1620 aa15.57■□□□□ 0.08
SNX11-211ENST00000582481 CNTLNQ9NXG0 1405 aa15.57■□□□□ 0.08
SNX11-211ENST00000582481 PLA2R1Q13018 1463 aa15.57■□□□□ 0.08
SNX11-211ENST00000582481 HSPA1LP34931 641 aa15.56■□□□□ 0.08
SNX11-211ENST00000582481 PREX2Q70Z35 1606 aa15.56■□□□□ 0.08
SNX11-211ENST00000582481 CEP170BQ9Y4F5 1589 aaPredicted RBP15.55■□□□□ 0.08
SNX11-211ENST00000582481 TROQ12816 1431 aaPredicted RBP15.55■□□□□ 0.08
SNX11-211ENST00000582481 SUPT6HQ7KZ85 1726 aaKnown RBP15.53■□□□□ 0.08
SNX11-211ENST00000582481 CLTCQ00610 1675 aaKnown RBP15.52■□□□□ 0.08
SNX11-211ENST00000582481 NEURL4Q96JN8 1562 aa15.51■□□□□ 0.07
SNX11-211ENST00000582481 PTPRKQ15262 1439 aa15.51■□□□□ 0.07
SNX11-211ENST00000582481 ZMYM3Q14202 1370 aa15.5■□□□□ 0.07
SNX11-211ENST00000582481 PLXNC1O60486 1568 aa15.5■□□□□ 0.07
SNX11-211ENST00000582481 SAMD9LQ8IVG5 1584 aa15.5■□□□□ 0.07
SNX11-211ENST00000582481 CDC42BPAQ5VT25 1732 aa15.48■□□□□ 0.07
SNX11-211ENST00000582481 ARHGAP35Q9NRY4 1499 aa15.48■□□□□ 0.07
SNX11-211ENST00000582481 POLR1AO95602 1720 aaPredicted RBP15.46■□□□□ 0.07
SNX11-211ENST00000582481 PKD2Q13563 968 aa15.46■□□□□ 0.07
SNX11-211ENST00000582481 DNMT1P26358 1616 aaKnown RBP15.46■□□□□ 0.06
SNX11-211ENST00000582481 ESF1Q9H501 851 aaKnown RBP15.45■□□□□ 0.06
SNX11-211ENST00000582481 VWDEQ8N2E2 1590 aa15.45■□□□□ 0.06
SNX11-211ENST00000582481 FMN1Q68DA7 1419 aa15.44■□□□□ 0.06
SNX11-211ENST00000582481 MYT1LQ9UL68 1186 aa15.44■□□□□ 0.06
SNX11-211ENST00000582481 INO80Q9ULG1 1556 aaPredicted RBP15.44■□□□□ 0.06
SNX11-211ENST00000582481 EEA1Q15075 1411 aa15.43■□□□□ 0.06
SNX11-211ENST00000582481 CPS1P31327 1500 aa15.43■□□□□ 0.06
SNX11-211ENST00000582481 PIP4K2BP78356 416 aa15.43■□□□□ 0.06
SNX11-211ENST00000582481 PPP6R1Q9UPN7 881 aa15.43■□□□□ 0.06
SNX11-211ENST00000582481 SYCP2Q9BX26 1530 aa15.42■□□□□ 0.06
SNX11-211ENST00000582481 CLIP1P30622 1438 aa15.42■□□□□ 0.06
SNX11-211ENST00000582481 A2ML1A8K2U0 1454 aa15.41■□□□□ 0.06
SNX11-211ENST00000582481 SHANK2Q9UPX8 1470 aa15.41■□□□□ 0.06
SNX11-211ENST00000582481 STRCP1A6NGW2 1772 aa15.4■□□□□ 0.06
SNX11-211ENST00000582481 ATP7AQ04656 1500 aa15.4■□□□□ 0.06
SNX11-211ENST00000582481 SCAF1Q9H7N4 1312 aaKnown RBP15.4■□□□□ 0.06
SNX11-211ENST00000582481 RGS17Q9UGC6 210 aaPredicted RBP15.38■□□□□ 0.05
SNX11-211ENST00000582481 ATP1B4Q9UN42 357 aaPredicted RBP15.38■□□□□ 0.05
SNX11-211ENST00000582481 CDK11AQ9UQ88 783 aaPredicted RBP15.38■□□□□ 0.05
SNX11-211ENST00000582481 A2MP01023 1474 aa15.36■□□□□ 0.05
SNX11-211ENST00000582481 TOM1O60784 492 aa15.35■□□□□ 0.05
SNX11-211ENST00000582481 GPATCH8Q9UKJ3 1502 aaKnown RBP15.33■□□□□ 0.04
SNX11-211ENST00000582481 SPAG9O60271 1321 aaKnown RBP15.31■□□□□ 0.04
SNX11-211ENST00000582481 RNF17Q9BXT8 1623 aaKnown RBP15.31■□□□□ 0.04
SNX11-211ENST00000582481 ADGBQ8N7X0 1667 aa15.31■□□□□ 0.04
SNX11-211ENST00000582481 MED14O60244 1454 aa15.3■□□□□ 0.04
SNX11-211ENST00000582481 DEPDC5O75140 1603 aa15.3■□□□□ 0.04
SNX11-211ENST00000582481 LRRC7Q96NW7 1537 aa15.3■□□□□ 0.04
SNX11-211ENST00000582481 CCDC18Q5T9S5 1454 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms