RNA–Protein interactions for RNA: ENST00000582104.5

SNX11-210, Transcript of sorting nexin 11, humanhuman

TSL 2 BASIC

Gene SNX11, Length 1,282 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX11-210ENST00000582104 P3H3Q8IVL6 736 aa21.59■■□□□ 1.05
SNX11-210ENST00000582104 CFAP74Q9C0B2 1584 aa21.59■■□□□ 1.05
SNX11-210ENST00000582104 DMRT2Q9Y5R5 561 aa21.57■■□□□ 1.04
SNX11-210ENST00000582104 ARHGEF12Q9NZN5 1544 aa21.55■■□□□ 1.04
SNX11-210ENST00000582104 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.55■■□□□ 1.04
SNX11-210ENST00000582104 HNRNPUL2Q1KMD3 747 aaKnown RBP21.55■■□□□ 1.04
SNX11-210ENST00000582104 MAGI2Q86UL8 1455 aa21.55■■□□□ 1.04
SNX11-210ENST00000582104 HECW1Q76N89 1606 aa21.54■■□□□ 1.04
SNX11-210ENST00000582104 SAMD9Q5K651 1589 aa21.53■■□□□ 1.04
SNX11-210ENST00000582104 NUP153P49790 1475 aaKnown RBP21.52■■□□□ 1.04
SNX11-210ENST00000582104 UBTFP17480 764 aaKnown RBP21.51■■□□□ 1.03
SNX11-210ENST00000582104 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP21.5■■□□□ 1.03
SNX11-210ENST00000582104 LTBP4Q8N2S1 1624 aa21.49■■□□□ 1.03
SNX11-210ENST00000582104 CEBPAP49715 358 aaPredicted RBP21.49■■□□□ 1.03
SNX11-210ENST00000582104 PTPRTO14522 1441 aa21.48■■□□□ 1.03
SNX11-210ENST00000582104 UHRF1BP1Q6BDS2 1440 aa21.48■■□□□ 1.03
SNX11-210ENST00000582104 IQSEC2Q5JU85 1478 aa21.46■■□□□ 1.03
SNX11-210ENST00000582104 SETD1BQ9UPS6 1966 aaKnown RBP21.45■■□□□ 1.02
SNX11-210ENST00000582104 C9orf84Q5VXU9 1444 aa21.44■■□□□ 1.02
SNX11-210ENST00000582104 ATP10AO60312 1499 aa21.44■■□□□ 1.02
SNX11-210ENST00000582104 PLEKHD1A6NEE1 506 aa21.41■■□□□ 1.02
SNX11-210ENST00000582104 SCAPERQ9BY12 1400 aa21.4■■□□□ 1.02
SNX11-210ENST00000582104 RANGAP1P46060 587 aaPredicted RBP21.34■■□□□ 1.01
SNX11-210ENST00000582104 C3P01024 1663 aa21.34■■□□□ 1.01
SNX11-210ENST00000582104 PLCH2O75038 1416 aa21.31■■□□□ 1
SNX11-210ENST00000582104 NCOA1Q15788 1441 aa21.31■■□□□ 1
SNX11-210ENST00000582104 CEP162Q5TB80 1403 aa21.3■■□□□ 1
SNX11-210ENST00000582104 UBAP1LF5GYI3 381 aa21.25■□□□□ 0.99
SNX11-210ENST00000582104 CLIP1P30622 1438 aa21.25■□□□□ 0.99
SNX11-210ENST00000582104 KDM5CP41229 1560 aa21.25■□□□□ 0.99
SNX11-210ENST00000582104 DIP2CQ9Y2E4 1556 aa21.25■□□□□ 0.99
SNX11-210ENST00000582104 CDK13Q14004 1512 aaKnown RBP21.24■□□□□ 0.99
SNX11-210ENST00000582104 MYO5CQ9NQX4 1742 aa21.24■□□□□ 0.99
SNX11-210ENST00000582104 REREQ9P2R6 1566 aa21.24■□□□□ 0.99
SNX11-210ENST00000582104 TRAPPC8Q9Y2L5 1435 aa21.24■□□□□ 0.99
SNX11-210ENST00000582104 ZNF518AQ6AHZ1 1483 aa21.24■□□□□ 0.99
SNX11-210ENST00000582104 ARHGAP35Q9NRY4 1499 aa21.24■□□□□ 0.99
SNX11-210ENST00000582104 MED1Q15648 1581 aaPredicted RBP21.22■□□□□ 0.99
SNX11-210ENST00000582104 CAMSAP1Q5T5Y3 1602 aa21.22■□□□□ 0.99
SNX11-210ENST00000582104 EFCAB2Q5VUJ9 269 aa21.2■□□□□ 0.98
SNX11-210ENST00000582104 ZNF335Q9H4Z2 1342 aaPredicted RBP21.2■□□□□ 0.98
SNX11-210ENST00000582104 ABCA6Q8N139 1617 aa21.19■□□□□ 0.98
SNX11-210ENST00000582104 AFAP1Q8N556 730 aa21.17■□□□□ 0.98
SNX11-210ENST00000582104 AGLP35573 1532 aa21.17■□□□□ 0.98
SNX11-210ENST00000582104 ESF1Q9H501 851 aaKnown RBP21.14■□□□□ 0.97
SNX11-210ENST00000582104 MYT1LQ9UL68 1186 aa21.13■□□□□ 0.97
SNX11-210ENST00000582104 KIF14Q15058 1648 aa21.12■□□□□ 0.97
SNX11-210ENST00000582104 NCKAP5LQ9HCH0 1330 aa21.12■□□□□ 0.97
SNX11-210ENST00000582104 CNTLNQ9NXG0 1405 aa21.12■□□□□ 0.97
SNX11-210ENST00000582104 ARHGAP5Q13017 1502 aa21.11■□□□□ 0.97
SNX11-210ENST00000582104 MLH3Q9UHC1 1453 aa21.11■□□□□ 0.97
SNX11-210ENST00000582104 NPATQ14207 1427 aa21.1■□□□□ 0.97
SNX11-210ENST00000582104 HSPA1LP34931 641 aa21.09■□□□□ 0.97
SNX11-210ENST00000582104 MROH2AA6NES4 1674 aa21.09■□□□□ 0.97
SNX11-210ENST00000582104 ZNF142P52746 1687 aaPredicted RBP21.06■□□□□ 0.96
SNX11-210ENST00000582104 PLA2R1Q13018 1463 aa21.06■□□□□ 0.96
SNX11-210ENST00000582104 TCOF1Q13428 1488 aaKnown RBP21.05■□□□□ 0.96
SNX11-210ENST00000582104 SUPT6HQ7KZ85 1726 aaKnown RBP21.04■□□□□ 0.96
SNX11-210ENST00000582104 MYO3AQ8NEV4 1616 aa21.04■□□□□ 0.96
SNX11-210ENST00000582104 PKD2Q13563 968 aa21.03■□□□□ 0.96
SNX11-210ENST00000582104 SCAF1Q9H7N4 1312 aaKnown RBP21.03■□□□□ 0.96
SNX11-210ENST00000582104 CDC42BPBQ9Y5S2 1711 aa21.02■□□□□ 0.96
SNX11-210ENST00000582104 KIDINS220Q9ULH0 1771 aa21.02■□□□□ 0.96
SNX11-210ENST00000582104 ABCC1P33527 1531 aa21■□□□□ 0.95
SNX11-210ENST00000582104 ITSN2Q9NZM3 1697 aa21■□□□□ 0.95
SNX11-210ENST00000582104 PIP4K2BP78356 416 aa21■□□□□ 0.95
SNX11-210ENST00000582104 CEP170BQ9Y4F5 1589 aaPredicted RBP21■□□□□ 0.95
SNX11-210ENST00000582104 ZMYM3Q14202 1370 aa20.99■□□□□ 0.95
SNX11-210ENST00000582104 VPS8Q8N3P4 1428 aa20.99■□□□□ 0.95
SNX11-210ENST00000582104 TROQ12816 1431 aaPredicted RBP20.98■□□□□ 0.95
SNX11-210ENST00000582104 PPP6R1Q9UPN7 881 aa20.97■□□□□ 0.95
SNX11-210ENST00000582104 CDK11AQ9UQ88 783 aaPredicted RBP20.97■□□□□ 0.95
SNX11-210ENST00000582104 FMN1Q68DA7 1419 aa20.96■□□□□ 0.95
SNX11-210ENST00000582104 ATP1B4Q9UN42 357 aaPredicted RBP20.95■□□□□ 0.94
SNX11-210ENST00000582104 PREX2Q70Z35 1606 aa20.95■□□□□ 0.94
SNX11-210ENST00000582104 CLTCQ00610 1675 aaKnown RBP20.95■□□□□ 0.94
SNX11-210ENST00000582104 TOM1O60784 492 aa20.94■□□□□ 0.94
SNX11-210ENST00000582104 CPS1P31327 1500 aa20.92■□□□□ 0.94
SNX11-210ENST00000582104 PTPRKQ15262 1439 aa20.91■□□□□ 0.94
SNX11-210ENST00000582104 CASKIN1Q8WXD9 1431 aa20.91■□□□□ 0.94
SNX11-210ENST00000582104 LRRIQ1Q96JM4 1722 aa20.9■□□□□ 0.94
SNX11-210ENST00000582104 ALKQ9UM73 1620 aa20.89■□□□□ 0.93
SNX11-210ENST00000582104 SAMD9LQ8IVG5 1584 aa20.88■□□□□ 0.93
SNX11-210ENST00000582104 FYCO1Q9BQS8 1478 aa20.88■□□□□ 0.93
SNX11-210ENST00000582104 POLR1AO95602 1720 aaPredicted RBP20.87■□□□□ 0.93
SNX11-210ENST00000582104 SHANK2Q9UPX8 1470 aa20.87■□□□□ 0.93
SNX11-210ENST00000582104 NEURL4Q96JN8 1562 aa20.86■□□□□ 0.93
SNX11-210ENST00000582104 DNMT1P26358 1616 aaKnown RBP20.86■□□□□ 0.93
SNX11-210ENST00000582104 A2ML1A8K2U0 1454 aa20.84■□□□□ 0.93
SNX11-210ENST00000582104 PLXNC1O60486 1568 aa20.84■□□□□ 0.93
SNX11-210ENST00000582104 CDC42BPAQ5VT25 1732 aa20.82■□□□□ 0.92
SNX11-210ENST00000582104 VWDEQ8N2E2 1590 aa20.8■□□□□ 0.92
SNX11-210ENST00000582104 ATP7AQ04656 1500 aa20.78■□□□□ 0.92
SNX11-210ENST00000582104 SYCP2Q9BX26 1530 aa20.78■□□□□ 0.92
SNX11-210ENST00000582104 RGS17Q9UGC6 210 aaPredicted RBP20.77■□□□□ 0.92
SNX11-210ENST00000582104 SPAG9O60271 1321 aaKnown RBP20.77■□□□□ 0.91
SNX11-210ENST00000582104 INO80Q9ULG1 1556 aaPredicted RBP20.76■□□□□ 0.91
SNX11-210ENST00000582104 A2MP01023 1474 aa20.76■□□□□ 0.91
SNX11-210ENST00000582104 GGT6Q6P531 493 aa20.75■□□□□ 0.91
SNX11-210ENST00000582104 TIAM1Q13009 1591 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms