RNA–Protein interactions for RNA: ENST00000581010.1

SENP3-205, Transcript of SUMO specific peptidase 3, humanhuman

Gene SENP3, Length 527 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SENP3-205ENST00000581010 PCGF6Q9BYE7 350 aa11.41□□□□□ -0.58
SENP3-205ENST00000581010 FRMPD1Q5SYB0 1578 aa11.41□□□□□ -0.58
SENP3-205ENST00000581010 CDK13Q14004 1512 aaKnown RBP11.4□□□□□ -0.58
SENP3-205ENST00000581010 EHBP1L1Q8N3D4 1523 aa11.4□□□□□ -0.58
SENP3-205ENST00000581010 CDK11AQ9UQ88 783 aaPredicted RBP11.4□□□□□ -0.58
SENP3-205ENST00000581010 ABCA8O94911 1581 aa11.4□□□□□ -0.58
SENP3-205ENST00000581010 SUPT6HQ7KZ85 1726 aaKnown RBP11.4□□□□□ -0.58
SENP3-205ENST00000581010 STRCQ7RTU9 1775 aa11.39□□□□□ -0.59
SENP3-205ENST00000581010 NUP153P49790 1475 aaKnown RBP11.38□□□□□ -0.59
SENP3-205ENST00000581010 KANK4Q5T7N3 995 aaPredicted RBP11.38□□□□□ -0.59
SENP3-205ENST00000581010 FER1L4A9Z1Z3 1794 aa11.38□□□□□ -0.59
SENP3-205ENST00000581010 SIGLEC1Q9BZZ2 1709 aa11.38□□□□□ -0.59
SENP3-205ENST00000581010 RAPGEF3O95398 923 aa11.37□□□□□ -0.59
SENP3-205ENST00000581010 PREX1Q8TCU6 1659 aa11.36□□□□□ -0.59
SENP3-205ENST00000581010 ARHGEF40Q8TER5 1519 aa11.36□□□□□ -0.59
SENP3-205ENST00000581010 ABCA9Q8IUA7 1624 aa11.33□□□□□ -0.6
SENP3-205ENST00000581010 TTC37Q6PGP7 1564 aa11.32□□□□□ -0.6
SENP3-205ENST00000581010 KIF14Q15058 1648 aa11.31□□□□□ -0.6
SENP3-205ENST00000581010 PLEKHD1A6NEE1 506 aa11.31□□□□□ -0.6
SENP3-205ENST00000581010 RICTORQ6R327 1708 aa11.31□□□□□ -0.6
SENP3-205ENST00000581010 NCOA2Q15596 1464 aa11.31□□□□□ -0.6
SENP3-205ENST00000581010 ATP10BO94823 1461 aa11.3□□□□□ -0.6
SENP3-205ENST00000581010 ITSN2Q9NZM3 1697 aa11.3□□□□□ -0.6
SENP3-205ENST00000581010 TROQ12816 1431 aaPredicted RBP11.29□□□□□ -0.6
SENP3-205ENST00000581010 YEATS2Q9ULM3 1422 aa11.29□□□□□ -0.6
SENP3-205ENST00000581010 LTBP4Q8N2S1 1624 aa11.28□□□□□ -0.6
SENP3-205ENST00000581010 FANCAO15360 1455 aa11.27□□□□□ -0.6
SENP3-205ENST00000581010 NEO1Q92859 1461 aa11.27□□□□□ -0.6
SENP3-205ENST00000581010 MLECQ14165 292 aa11.27□□□□□ -0.61
SENP3-205ENST00000581010 PHLDB1Q86UU1 1377 aa11.27□□□□□ -0.61
SENP3-205ENST00000581010 CCNB3Q8WWL7 1395 aa11.27□□□□□ -0.61
SENP3-205ENST00000581010 MED1Q15648 1581 aaPredicted RBP11.26□□□□□ -0.61
SENP3-205ENST00000581010 FAM50AQ14320 339 aaKnown RBP11.26□□□□□ -0.61
SENP3-205ENST00000581010 MYOM3Q5VTT5 1437 aa11.26□□□□□ -0.61
SENP3-205ENST00000581010 POGZQ7Z3K3 1410 aa11.26□□□□□ -0.61
SENP3-205ENST00000581010 RRBP1Q9P2E9 1410 aaKnown RBP11.26□□□□□ -0.61
SENP3-205ENST00000581010 DMRT2Q9Y5R5 561 aa11.24□□□□□ -0.61
SENP3-205ENST00000581010 FGD6Q6ZV73 1430 aa11.24□□□□□ -0.61
SENP3-205ENST00000581010 PTPN23Q9H3S7 1636 aa11.24□□□□□ -0.61
SENP3-205ENST00000581010 IQSEC2Q5JU85 1478 aa11.23□□□□□ -0.61
SENP3-205ENST00000581010 ITGAEP38570 1179 aa11.22□□□□□ -0.61
SENP3-205ENST00000581010 ZFYVE16Q7Z3T8 1539 aa11.22□□□□□ -0.61
SENP3-205ENST00000581010 MYO5CQ9NQX4 1742 aa11.22□□□□□ -0.61
SENP3-205ENST00000581010 AKNAQ7Z591 1439 aa11.21□□□□□ -0.61
SENP3-205ENST00000581010 CEBPAP49715 358 aaPredicted RBP11.21□□□□□ -0.61
SENP3-205ENST00000581010 CDC42BPAQ5VT25 1732 aa11.21□□□□□ -0.62
SENP3-205ENST00000581010 DENND4BO75064 1496 aaPredicted RBP11.2□□□□□ -0.62
SENP3-205ENST00000581010 PTPRTO14522 1441 aa11.2□□□□□ -0.62
SENP3-205ENST00000581010 SETD1BQ9UPS6 1966 aaKnown RBP11.2□□□□□ -0.62
SENP3-205ENST00000581010 ZMYM4Q5VZL5 1548 aa11.19□□□□□ -0.62
SENP3-205ENST00000581010 UHRF1BP1Q6BDS2 1440 aa11.19□□□□□ -0.62
SENP3-205ENST00000581010 MIA2Q96PC5 1412 aa11.19□□□□□ -0.62
SENP3-205ENST00000581010 ARHGEF12Q9NZN5 1544 aa11.19□□□□□ -0.62
SENP3-205ENST00000581010 PREX2Q70Z35 1606 aa11.18□□□□□ -0.62
SENP3-205ENST00000581010 CFDP1Q9UEE9 299 aaPredicted RBP11.18□□□□□ -0.62
SENP3-205ENST00000581010 UBAP1LF5GYI3 381 aa11.17□□□□□ -0.62
SENP3-205ENST00000581010 ZNF777Q9ULD5 760 aaPredicted RBP11.17□□□□□ -0.62
SENP3-205ENST00000581010 ARHGAP5Q13017 1502 aa11.17□□□□□ -0.62
SENP3-205ENST00000581010 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP11.16□□□□□ -0.62
SENP3-205ENST00000581010 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP11.16□□□□□ -0.62
SENP3-205ENST00000581010 CFAP74Q9C0B2 1584 aa11.16□□□□□ -0.62
SENP3-205ENST00000581010 GPATCH8Q9UKJ3 1502 aaKnown RBP11.15□□□□□ -0.62
SENP3-205ENST00000581010 C3P01024 1663 aa11.15□□□□□ -0.62
SENP3-205ENST00000581010 CAMSAP2Q08AD1 1489 aa11.15□□□□□ -0.62
SENP3-205ENST00000581010 TCOF1Q13428 1488 aaKnown RBP11.15□□□□□ -0.62
SENP3-205ENST00000581010 CDC42BPBQ9Y5S2 1711 aa11.15□□□□□ -0.63
SENP3-205ENST00000581010 DNMT1P26358 1616 aaKnown RBP11.12□□□□□ -0.63
SENP3-205ENST00000581010 CROCC2H7BZ55 1655 aa11.11□□□□□ -0.63
SENP3-205ENST00000581010 ADGBQ8N7X0 1667 aa11.11□□□□□ -0.63
SENP3-205ENST00000581010 NCOA1Q15788 1441 aa11.1□□□□□ -0.63
SENP3-205ENST00000581010 HSPA1LP34931 641 aa11.1□□□□□ -0.63
SENP3-205ENST00000581010 PHF23Q9BUL5 403 aaPredicted RBP11.1□□□□□ -0.63
SENP3-205ENST00000581010 MAGI2Q86UL8 1455 aa11.1□□□□□ -0.63
SENP3-205ENST00000581010 PLEKHH2Q8IVE3 1493 aa11.1□□□□□ -0.63
SENP3-205ENST00000581010 ZNF335Q9H4Z2 1342 aaPredicted RBP11.09□□□□□ -0.63
SENP3-205ENST00000581010 SAMD9LQ8IVG5 1584 aa11.09□□□□□ -0.63
SENP3-205ENST00000581010 DAPK1P53355 1430 aa11.09□□□□□ -0.63
SENP3-205ENST00000581010 SCAF1Q9H7N4 1312 aaKnown RBP11.09□□□□□ -0.63
SENP3-205ENST00000581010 EFCAB2Q5VUJ9 269 aa11.08□□□□□ -0.64
SENP3-205ENST00000581010 CCER1Q8TC90 406 aaPredicted RBP11.08□□□□□ -0.64
SENP3-205ENST00000581010 CAMSAP1Q5T5Y3 1602 aa11.08□□□□□ -0.64
SENP3-205ENST00000581010 PLCH2O75038 1416 aa11.08□□□□□ -0.64
SENP3-205ENST00000581010 C9orf84Q5VXU9 1444 aa11.08□□□□□ -0.64
SENP3-205ENST00000581010 ZNF644Q9H582 1327 aaPredicted RBP11.08□□□□□ -0.64
SENP3-205ENST00000581010 GCC2Q8IWJ2 1684 aa11.08□□□□□ -0.64
SENP3-205ENST00000581010 ATP10AO60312 1499 aa11.07□□□□□ -0.64
SENP3-205ENST00000581010 SYCP2Q9BX26 1530 aa11.06□□□□□ -0.64
SENP3-205ENST00000581010 CHIC2Q9UKJ5 165 aa11.06□□□□□ -0.64
SENP3-205ENST00000581010 ARHGEF5Q12774 1597 aa11.06□□□□□ -0.64
SENP3-205ENST00000581010 TSPY4P0CV99 314 aa11.05□□□□□ -0.64
SENP3-205ENST00000581010 TSPY10P0CW01 314 aa11.05□□□□□ -0.64
SENP3-205ENST00000581010 SETD5Q9C0A6 1442 aa11.05□□□□□ -0.64
SENP3-205ENST00000581010 CCDC141Q6ZP82 1450 aa11.05□□□□□ -0.64
SENP3-205ENST00000581010 PIP4K2BP78356 416 aa11.04□□□□□ -0.64
SENP3-205ENST00000581010 RSPH4AQ5TD94 716 aa11.04□□□□□ -0.64
SENP3-205ENST00000581010 SHANK2Q9UPX8 1470 aa11.04□□□□□ -0.64
SENP3-205ENST00000581010 ABCC1P33527 1531 aa11.04□□□□□ -0.64
SENP3-205ENST00000581010 ABCC5O15440 1437 aa11.03□□□□□ -0.64
SENP3-205ENST00000581010 NCKAP5LQ9HCH0 1330 aa11.03□□□□□ -0.64
SENP3-205ENST00000581010 ANKRD30AQ9BXX3 1397 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms