RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 ATP10BO94823 1461 aa13.63□□□□□ -0.23
SMARCE1-217ENST00000580654 GOLGA3Q08378 1498 aa13.62□□□□□ -0.23
SMARCE1-217ENST00000580654 RICTORQ6R327 1708 aa13.61□□□□□ -0.23
SMARCE1-217ENST00000580654 ARID3CA6NKF2 412 aa13.6□□□□□ -0.23
SMARCE1-217ENST00000580654 STRCQ7RTU9 1775 aa13.59□□□□□ -0.23
SMARCE1-217ENST00000580654 FER1L4A9Z1Z3 1794 aa13.58□□□□□ -0.24
SMARCE1-217ENST00000580654 TTC37Q6PGP7 1564 aa13.57□□□□□ -0.24
SMARCE1-217ENST00000580654 PREX1Q8TCU6 1659 aa13.55□□□□□ -0.24
SMARCE1-217ENST00000580654 FHOD3Q2V2M9 1422 aa13.54□□□□□ -0.24
SMARCE1-217ENST00000580654 FANCAO15360 1455 aa13.54□□□□□ -0.24
SMARCE1-217ENST00000580654 DENND4BO75064 1496 aaPredicted RBP13.54□□□□□ -0.24
SMARCE1-217ENST00000580654 YEATS2Q9ULM3 1422 aa13.53□□□□□ -0.24
SMARCE1-217ENST00000580654 ZMYM4Q5VZL5 1548 aa13.53□□□□□ -0.24
SMARCE1-217ENST00000580654 POGZQ7Z3K3 1410 aa13.52□□□□□ -0.25
SMARCE1-217ENST00000580654 ZFYVE16Q7Z3T8 1539 aa13.51□□□□□ -0.25
SMARCE1-217ENST00000580654 AKNAQ7Z591 1439 aa13.51□□□□□ -0.25
SMARCE1-217ENST00000580654 RAPGEF6Q8TEU7 1601 aa13.5□□□□□ -0.25
SMARCE1-217ENST00000580654 APLP2Q06481 763 aa13.49□□□□□ -0.25
SMARCE1-217ENST00000580654 ZNF219Q9P2Y4 722 aaPredicted RBP13.49□□□□□ -0.25
SMARCE1-217ENST00000580654 EFCAB5A4FU69 1503 aa13.49□□□□□ -0.25
SMARCE1-217ENST00000580654 ARHGEF12Q9NZN5 1544 aa13.49□□□□□ -0.25
SMARCE1-217ENST00000580654 MLECQ14165 292 aa13.48□□□□□ -0.25
SMARCE1-217ENST00000580654 P3H3Q8IVL6 736 aa13.48□□□□□ -0.25
SMARCE1-217ENST00000580654 LTBP4Q8N2S1 1624 aa13.48□□□□□ -0.25
SMARCE1-217ENST00000580654 HECW1Q76N89 1606 aa13.47□□□□□ -0.25
SMARCE1-217ENST00000580654 CFAP74Q9C0B2 1584 aa13.46□□□□□ -0.25
SMARCE1-217ENST00000580654 ABCB7O75027 752 aa13.46□□□□□ -0.25
SMARCE1-217ENST00000580654 SAMD9Q5K651 1589 aa13.45□□□□□ -0.26
SMARCE1-217ENST00000580654 NUP153P49790 1475 aaKnown RBP13.45□□□□□ -0.26
SMARCE1-217ENST00000580654 PRXQ9BXM0 1461 aa13.45□□□□□ -0.26
SMARCE1-217ENST00000580654 CEBPAP49715 358 aaPredicted RBP13.45□□□□□ -0.26
SMARCE1-217ENST00000580654 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP13.44□□□□□ -0.26
SMARCE1-217ENST00000580654 MAGI2Q86UL8 1455 aa13.44□□□□□ -0.26
SMARCE1-217ENST00000580654 PTPRTO14522 1441 aa13.43□□□□□ -0.26
SMARCE1-217ENST00000580654 IQSEC2Q5JU85 1478 aa13.42□□□□□ -0.26
SMARCE1-217ENST00000580654 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.41□□□□□ -0.26
SMARCE1-217ENST00000580654 HNRNPUL2Q1KMD3 747 aaKnown RBP13.41□□□□□ -0.26
SMARCE1-217ENST00000580654 SETD1BQ9UPS6 1966 aaKnown RBP13.4□□□□□ -0.26
SMARCE1-217ENST00000580654 UHRF1BP1Q6BDS2 1440 aa13.39□□□□□ -0.27
SMARCE1-217ENST00000580654 ATP10AO60312 1499 aa13.39□□□□□ -0.27
SMARCE1-217ENST00000580654 C9orf84Q5VXU9 1444 aa13.38□□□□□ -0.27
SMARCE1-217ENST00000580654 C3P01024 1663 aa13.37□□□□□ -0.27
SMARCE1-217ENST00000580654 FAM9AQ8IZU1 332 aaPredicted RBP13.37□□□□□ -0.27
SMARCE1-217ENST00000580654 SLC4A2P04920 1241 aa13.36□□□□□ -0.27
SMARCE1-217ENST00000580654 RBM42Q9BTD8 480 aaKnown RBP13.36□□□□□ -0.27
SMARCE1-217ENST00000580654 SCAPERQ9BY12 1400 aa13.36□□□□□ -0.27
SMARCE1-217ENST00000580654 PLEKHD1A6NEE1 506 aa13.34□□□□□ -0.27
SMARCE1-217ENST00000580654 NCOA1Q15788 1441 aa13.32□□□□□ -0.28
SMARCE1-217ENST00000580654 PLCH2O75038 1416 aa13.31□□□□□ -0.28
SMARCE1-217ENST00000580654 MED1Q15648 1581 aaPredicted RBP13.29□□□□□ -0.28
SMARCE1-217ENST00000580654 DIP2CQ9Y2E4 1556 aa13.29□□□□□ -0.28
SMARCE1-217ENST00000580654 CHRDL2Q6WN34 429 aa13.29□□□□□ -0.28
SMARCE1-217ENST00000580654 KDM5CP41229 1560 aa13.28□□□□□ -0.28
SMARCE1-217ENST00000580654 REREQ9P2R6 1566 aa13.28□□□□□ -0.28
SMARCE1-217ENST00000580654 MYO5CQ9NQX4 1742 aa13.27□□□□□ -0.28
SMARCE1-217ENST00000580654 UBAP1LF5GYI3 381 aa13.27□□□□□ -0.29
SMARCE1-217ENST00000580654 CDK13Q14004 1512 aaKnown RBP13.27□□□□□ -0.29
SMARCE1-217ENST00000580654 CAMSAP1Q5T5Y3 1602 aa13.27□□□□□ -0.29
SMARCE1-217ENST00000580654 ABCA6Q8N139 1617 aa13.26□□□□□ -0.29
SMARCE1-217ENST00000580654 ZNF335Q9H4Z2 1342 aaPredicted RBP13.26□□□□□ -0.29
SMARCE1-217ENST00000580654 TRAPPC8Q9Y2L5 1435 aa13.26□□□□□ -0.29
SMARCE1-217ENST00000580654 ZNF518AQ6AHZ1 1483 aa13.24□□□□□ -0.29
SMARCE1-217ENST00000580654 AFAP1Q8N556 730 aa13.23□□□□□ -0.29
SMARCE1-217ENST00000580654 AGLP35573 1532 aa13.23□□□□□ -0.29
SMARCE1-217ENST00000580654 KIF14Q15058 1648 aa13.21□□□□□ -0.29
SMARCE1-217ENST00000580654 NCKAP5LQ9HCH0 1330 aa13.21□□□□□ -0.29
SMARCE1-217ENST00000580654 RANGAP1P46060 587 aaPredicted RBP13.21□□□□□ -0.29
SMARCE1-217ENST00000580654 EFCAB2Q5VUJ9 269 aa13.21□□□□□ -0.29
SMARCE1-217ENST00000580654 SAMD1Q6SPF0 538 aaPredicted RBP13.21□□□□□ -0.29
SMARCE1-217ENST00000580654 HSPA1LP34931 641 aa13.2□□□□□ -0.3
SMARCE1-217ENST00000580654 MROH2AA6NES4 1674 aa13.18□□□□□ -0.3
SMARCE1-217ENST00000580654 MLH3Q9UHC1 1453 aa13.18□□□□□ -0.3
SMARCE1-217ENST00000580654 ZNF142P52746 1687 aaPredicted RBP13.18□□□□□ -0.3
SMARCE1-217ENST00000580654 NPATQ14207 1427 aa13.17□□□□□ -0.3
SMARCE1-217ENST00000580654 TCOF1Q13428 1488 aaKnown RBP13.16□□□□□ -0.3
SMARCE1-217ENST00000580654 SUPT6HQ7KZ85 1726 aaKnown RBP13.16□□□□□ -0.3
SMARCE1-217ENST00000580654 CDC42BPBQ9Y5S2 1711 aa13.16□□□□□ -0.3
SMARCE1-217ENST00000580654 CNTLNQ9NXG0 1405 aa13.16□□□□□ -0.3
SMARCE1-217ENST00000580654 ARHGAP5Q13017 1502 aa13.16□□□□□ -0.3
SMARCE1-217ENST00000580654 KIDINS220Q9ULH0 1771 aa13.16□□□□□ -0.3
SMARCE1-217ENST00000580654 MYO3AQ8NEV4 1616 aa13.16□□□□□ -0.3
SMARCE1-217ENST00000580654 PLA2R1Q13018 1463 aa13.16□□□□□ -0.3
SMARCE1-217ENST00000580654 CSRNP3Q8WYN3 585 aa13.14□□□□□ -0.31
SMARCE1-217ENST00000580654 ITSN2Q9NZM3 1697 aa13.14□□□□□ -0.31
SMARCE1-217ENST00000580654 ESF1Q9H501 851 aaKnown RBP13.13□□□□□ -0.31
SMARCE1-217ENST00000580654 MYT1LQ9UL68 1186 aa13.13□□□□□ -0.31
SMARCE1-217ENST00000580654 ALKQ9UM73 1620 aa13.13□□□□□ -0.31
SMARCE1-217ENST00000580654 ABCC1P33527 1531 aa13.13□□□□□ -0.31
SMARCE1-217ENST00000580654 CEP170BQ9Y4F5 1589 aaPredicted RBP13.12□□□□□ -0.31
SMARCE1-217ENST00000580654 PKD2Q13563 968 aa13.12□□□□□ -0.31
SMARCE1-217ENST00000580654 SP7Q8TDD2 431 aaPredicted RBP13.12□□□□□ -0.31
SMARCE1-217ENST00000580654 LRRIQ1Q96JM4 1722 aa13.11□□□□□ -0.31
SMARCE1-217ENST00000580654 ZMYM3Q14202 1370 aa13.11□□□□□ -0.31
SMARCE1-217ENST00000580654 PIP4K2BP78356 416 aa13.11□□□□□ -0.31
SMARCE1-217ENST00000580654 CLTCQ00610 1675 aaKnown RBP13.11□□□□□ -0.31
SMARCE1-217ENST00000580654 TROQ12816 1431 aaPredicted RBP13.09□□□□□ -0.31
SMARCE1-217ENST00000580654 PREX2Q70Z35 1606 aa13.09□□□□□ -0.31
SMARCE1-217ENST00000580654 PTPRKQ15262 1439 aa13.07□□□□□ -0.32
SMARCE1-217ENST00000580654 CPS1P31327 1500 aa13.07□□□□□ -0.32
SMARCE1-217ENST00000580654 NEURL4Q96JN8 1562 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms